Imports Me |
ALDEx2, AllelicImbalance, alpine, amplican, AneuFinder, annmap, annotatr, appreci8R, ArrayExpressHTS, ASpediaFI, ASpli, AssessORF, ATACCoGAPS, ATACseqQC, ATACseqTFEA, atena, ballgown, bamsignals, BasicSTARRseq, BBCAnalyzer, beadarray, BiocOncoTK, biovizBase, biscuiteer, BiSeq, bnbc, BPRMeth, branchpointer, breakpointR, BRGenomics, BSgenome, bsseq, BUMHMM, BumpyMatrix, BUSpaRse, CAGEfightR, cageminer, CAGEr, cBioPortalData, cfDNAPro, ChIC, ChIPanalyser, chipenrich, chipenrich.data, ChIPexoQual, ChIPQC, ChIPseeker, chipseq, ChIPseqR, ChIPsim, ChromHeatMap, ChromSCape, chromstaR, chromswitch, chromVAR, cicero, CINdex, circRNAprofiler, CircSeqAlignTk, cleanUpdTSeq, cleaver, cn.mops, CNEr, CNVfilteR, CNVMetrics, CNVPanelizer, CNVRanger, CNVrd2, COCOA, comapr, coMET, coMethDMR, compEpiTools, ComplexHeatmap, CompoundDb, contiBAIT, conumee, copynumber, CopyNumberPlots, CopywriteR, CoverageView, crisprBase, crisprBowtie, crisprDesign, crisprScore, CRISPRseek, CrispRVariants, crisprViz, csaw, dada2, DAMEfinder, dasper, debrowser, DECIPHER, deconvR, DegNorm, DelayedMatrixStats, deltaCaptureC, derfinder, derfinderHelper, derfinderPlot, DEScan2, DiffBind, diffHic, diffUTR, DMRcate, DMRScan, dmrseq, DNAfusion, DominoEffect, dpeak, DRIMSeq, DropletUtils, dStruct, easyRNASeq, EDASeq, eisaR, ELMER, enhancerHomologSearch, ENmix, EnrichedHeatmap, enrichTF, ensembldb, EpiCompare, epidecodeR, epigraHMM, EpiMix, epimutacions, epistack, EpiTxDb, epivizr, epivizrData, erma, esATAC, EventPointer, exomePeak2, extraChIPs, factR, FastqCleaner, fastseg, fcScan, FilterFFPE, FindIT2, fishpond, FRASER, GA4GHclient, gcapc, genbankr, geneAttribution, GeneGeneInteR, GENESIS, GeneStructureTools, genomation, GenomAutomorphism, genomeIntervals, GenomicAlignments, GenomicDataCommons, GenomicFiles, GenomicInteractionNodes, GenomicInteractions, GenomicOZone, GenomicScores, GenomicTuples, genotypeeval, GenVisR, ggbio, girafe, gmapR, gmoviz, GOfuncR, GOpro, GOTHiC, GSVA, GUIDEseq, gwascat, h5vc, HDF5Array, heatmaps, hermes, HiCBricks, HiCcompare, HiCDCPlus, HiContacts, HilbertCurve, HTSeqGenie, hummingbird, icetea, ideal, idr2d, IMAS, InPAS, INSPEcT, intansv, InteractionSet, InteractiveComplexHeatmap, IntEREst, InterMineR, ipdDb, iSEEu, IsoformSwitchAnalyzeR, isomiRs, IVAS, IWTomics, karyoploteR, katdetectr, leeBamViews, LinTInd, LOLA, m6Aboost, MADSEQ, maser, MatrixRider, mCSEA, MDTS, MEAL, MEDIPS, MesKit, metagene, metagene2, metaseqR2, MethCP, methimpute, methInheritSim, MethReg, methrix, methylCC, methylInheritance, methylKit, methylPipe, MethylSeekR, MethylSeqData, methylSig, methylumi, mia, microbiomeMarker, minfi, MinimumDistance, MIRA, missMethyl, MMAPPR2, Modstrings, monaLisa, mosaics, MOSim, Motif2Site, motifbreakR, motifmatchr, MouseFM, msa, MSA2dist, MsBackendMassbank, MsBackendMgf, MsBackendMsp, MsBackendRawFileReader, MsExperiment, msgbsR, MSnbase, MultiAssayExperiment, MultiDataSet, mumosa, MungeSumstats, musicatk, MutationalPatterns, NanoStringNCTools, ncRNAtools, netDx, NoRCE, normr, nucleoSim, nucleR, nullranges, NxtIRFcore, ODER, OGRE, oligoClasses, OmaDB, OMICsPCA, openPrimeR, Organism.dplyr, OrganismDbi, OUTRIDER, packFinder, panelcn.mops, pcaExplorer, pd.atdschip.tiling, pdInfoBuilder, PhIPData, Pi, PICS, PING, plethy, plotgardener, podkat, polyester, pqsfinder, pram, prebs, preciseTAD, PrecisionTrialDrawer, primirTSS, proActiv, profileplyr, ProteoDisco, PureCN, Pviz, QDNAseq, QFeatures, qpgraph, qPLEXanalyzer, qsea, QuasR, R3CPET, r3Cseq, R453Plus1Toolbox, RaggedExperiment, ramr, RareVariantVis, RCAS, rCGH, recount, recoup, REDseq, regioneR, regutools, REMP, Repitools, ReportingTools, RESOLVE, rfaRm, rfPred, RgnTX, RiboCrypt, RiboDiPA, RiboProfiling, riboSeqR, ribosomeProfilingQC, RIPAT, rnaEditr, RNAmodR.AlkAnilineSeq, RNAmodR.ML, RNAmodR.RiboMethSeq, RnBeads, roar, rprimer, Rqc, Rsamtools, RSVSim, RTN, rtracklayer, sarks, SCAN.UPC, scanMiR, scanMiRApp, SCANVIS, SCArray, scDblFinder, scHOT, scPipe, segmenter, segmentSeq, SeqArray, seqCAT, seqPattern, seqsetvis, SeqSQC, SeqVarTools, sesame, sesameData, sevenC, ShortRead, signeR, signifinder, SimFFPE, single, SingleMoleculeFootprinting, sitadela, SMITE, snapcount, SNPhood, soGGi, SomaticCancerAlterations, SomaticSignatures, SparseSignatures, spatialLIBD, spatzie, Spectra, spicyR, spiky, SpliceWiz, SplicingGraphs, SPLINTER, srnadiff, STAN, strandCheckR, StructuralVariantAnnotation, SummarizedExperiment, SynExtend, TAPseq, target, TarSeqQC, TCGAbiolinks, TCGAutils, TCseq, TFBSTools, TFEA.ChIP, TFHAZ, TitanCNA, TnT, tracktables, trackViewer, transcriptR, TransView, TreeSummarizedExperiment, TRESS, tricycle, tRNA, tRNAdbImport, tRNAscanImport, tscR, TVTB, txcutr, tximeta, UMI4Cats, Uniquorn, universalmotif, VanillaICE, VarCon, VariantAnnotation, VariantExperiment, VariantFiltering, VaSP, VDJdive, wavClusteR, wiggleplotr, xcms, xcore, XNAString, XVector, yamss |