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This is the development version of nucleR; for the stable release version, see nucleR.

Nucleosome positioning package for R

Bioconductor version: Development (3.19)

Nucleosome positioning for Tiling Arrays and NGS experiments.

Author: Oscar Flores, Ricard Illa

Maintainer: Alba Sala <alba.sala at>

Citation (from within R, enter citation("nucleR")):


To install this package, start R (version "4.4") and enter:

if (!require("BiocManager", quietly = TRUE))

# The following initializes usage of Bioc devel


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:

Vignette Title HTML R Script
Reference Manual PDF


biocViews ChIPSeq, Coverage, DataImport, Genetics, Microarray, NucleosomePositioning, QualityControl, Sequencing, Software
Version 2.35.0
In Bioconductor since BioC 2.9 (R-2.14) (12.5 years)
License LGPL (>= 3)
Depends R (>= 3.5.0), methods
Imports Biobase, BiocGenerics, Biostrings, GenomeInfoDb, GenomicRanges, IRanges, Rsamtools, S4Vectors, ShortRead, dplyr, ggplot2, magrittr, parallel, stats, utils, grDevices
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Suggests BiocStyle, knitr, rmarkdown, testthat
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Follow Installation instructions to use this package in your R session.

Source Package nucleR_2.35.0.tar.gz
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macOS Binary (x86_64) nucleR_2.35.0.tgz
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