IMAS
This is the development version of IMAS; for the stable release version, see IMAS.
Integrative analysis of Multi-omics data for Alternative Splicing
Bioconductor version: Development (3.21)
Integrative analysis of Multi-omics data for Alternative splicing.
Author: Seonggyun Han, Younghee Lee
Maintainer: Seonggyun Han <hangost at ssu.ac.kr>
Citation (from within R, enter
citation("IMAS")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("IMAS")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("IMAS")| IMAS : Integrative analysis of Multi-omics data for Alternative Splicing | R Script | |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | AlternativeSplicing, DifferentialExpression, DifferentialSplicing, GeneExpression, GeneRegulation, ImmunoOncology, RNASeq, Regression, SNP, Sequencing, Software, Transcription |
| Version | 1.31.0 |
| In Bioconductor since | BioC 3.5 (R-3.4) (7.5 years) |
| License | GPL-2 |
| Depends | R (> 3.0.0), GenomicFeatures, ggplot2, IVAS |
| Imports | doParallel, lme4, BiocGenerics, GenomicRanges, IRanges, foreach, AnnotationDbi, S4Vectors, GenomeInfoDb, stats, ggfortify, grDevices, methods, Matrix, utils, graphics, gridExtra, grid, lattice, Rsamtools, survival, BiocParallel, GenomicAlignments, parallel |
| System Requirements | |
| URL |
See More
| Suggests | BiocStyle, RUnit |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | IMAS_1.31.0.tar.gz |
| Windows Binary (x86_64) | IMAS_1.31.0.zip |
| macOS Binary (x86_64) | IMAS_1.31.0.tgz |
| macOS Binary (arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/IMAS |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/IMAS |
| Bioc Package Browser | https://code.bioconductor.org/browse/IMAS/ |
| Package Short Url | https://bioconductor.org/packages/IMAS/ |
| Package Downloads Report | Download Stats |