Yichen Wang
| Snapshot Date: 2021-10-22 14:50:11 -0400 (Fri, 22 Oct 2021) |
| git_url: https://git.bioconductor.org/packages/singleCellTK |
| git_branch: master |
| git_last_commit: fd2ca2e |
| git_last_commit_date: 2021-10-17 15:51:44 -0400 (Sun, 17 Oct 2021) |
| Back to Multiple platform build/check report for BioC 3.14 |
|
This page was generated on 2021-10-23 14:06:13 -0400 (Sat, 23 Oct 2021).
|
To the developers/maintainers of the singleCellTK package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/singleCellTK.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1807/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| singleCellTK 2.3.1 (landing page) Yichen Wang
| nebbiolo2 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||||
| riesling1 | Windows Server 2019 Standard / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: singleCellTK |
| Version: 2.3.1 |
| Command: /home/biocbuild/bbs-3.14-bioc/R/bin/R CMD check --install=check:singleCellTK.install-out.txt --library=/home/biocbuild/bbs-3.14-bioc/R/library --no-vignettes --timings singleCellTK_2.3.1.tar.gz |
| StartedAt: 2021-10-22 22:00:04 -0400 (Fri, 22 Oct 2021) |
| EndedAt: 2021-10-22 22:10:35 -0400 (Fri, 22 Oct 2021) |
| EllapsedTime: 630.8 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: singleCellTK.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.14-bioc/R/bin/R CMD check --install=check:singleCellTK.install-out.txt --library=/home/biocbuild/bbs-3.14-bioc/R/library --no-vignettes --timings singleCellTK_2.3.1.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.14-bioc/meat/singleCellTK.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘singleCellTK/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘singleCellTK’ version ‘2.3.1’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘singleCellTK’ can be installed ... OK
* checking installed package size ... NOTE
installed size is 6.5Mb
sub-directories of 1Mb or more:
extdata 1.6Mb
shiny 2.8Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
expTaggedData: no visible binding for global variable ‘assayTag’
Undefined global functions or variables:
assayTag
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking R/sysdata.rda ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
runSeurat 40.986 0.120 41.106
plotScDblFinderResults 22.810 0.404 23.189
plotDoubletFinderResults 21.733 0.128 21.851
runDoubletFinder 17.197 0.124 17.321
importExampleData 15.122 1.351 17.427
runScDblFinder 15.715 0.395 16.095
plotBcdsResults 8.546 0.100 7.753
plotScdsHybridResults 8.391 0.100 7.631
plotEmptyDropsResults 6.821 0.024 6.845
plotEmptyDropsScatter 6.677 0.024 6.702
plotDecontXResults 6.613 0.060 6.672
detectCellOutlier 6.455 0.020 6.475
runDecontX 6.406 0.068 6.474
runEmptyDrops 6.440 0.003 6.445
plotCxdsResults 6.082 0.057 6.129
plotUMAP 5.710 0.041 5.740
plotMarkerDiffExp 5.553 0.008 5.560
plotDEGViolin 5.195 0.136 5.319
findMarkerDiffExp 5.122 0.140 5.262
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘spelling.R’
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 2 NOTEs
See
‘/home/biocbuild/bbs-3.14-bioc/meat/singleCellTK.Rcheck/00check.log’
for details.
singleCellTK.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.14-bioc/R/bin/R CMD INSTALL singleCellTK ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.14-bioc/R/library’ * installing *source* package ‘singleCellTK’ ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** exec ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (singleCellTK)
singleCellTK.Rcheck/tests/spelling.Rout
R version 4.1.1 (2021-08-10) -- "Kick Things"
Copyright (C) 2021 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> if (requireNamespace('spelling', quietly = TRUE))
+ spelling::spell_check_test(vignettes = TRUE, error = FALSE, skip_on_cran = TRUE)
NULL
>
> proc.time()
user system elapsed
0.216 0.021 0.223
singleCellTK.Rcheck/tests/testthat.Rout
R version 4.1.1 (2021-08-10) -- "Kick Things"
Copyright (C) 2021 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(singleCellTK)
Loading required package: SummarizedExperiment
Loading required package: MatrixGenerics
Loading required package: matrixStats
Attaching package: 'MatrixGenerics'
The following objects are masked from 'package:matrixStats':
colAlls, colAnyNAs, colAnys, colAvgsPerRowSet, colCollapse,
colCounts, colCummaxs, colCummins, colCumprods, colCumsums,
colDiffs, colIQRDiffs, colIQRs, colLogSumExps, colMadDiffs,
colMads, colMaxs, colMeans2, colMedians, colMins, colOrderStats,
colProds, colQuantiles, colRanges, colRanks, colSdDiffs, colSds,
colSums2, colTabulates, colVarDiffs, colVars, colWeightedMads,
colWeightedMeans, colWeightedMedians, colWeightedSds,
colWeightedVars, rowAlls, rowAnyNAs, rowAnys, rowAvgsPerColSet,
rowCollapse, rowCounts, rowCummaxs, rowCummins, rowCumprods,
rowCumsums, rowDiffs, rowIQRDiffs, rowIQRs, rowLogSumExps,
rowMadDiffs, rowMads, rowMaxs, rowMeans2, rowMedians, rowMins,
rowOrderStats, rowProds, rowQuantiles, rowRanges, rowRanks,
rowSdDiffs, rowSds, rowSums2, rowTabulates, rowVarDiffs, rowVars,
rowWeightedMads, rowWeightedMeans, rowWeightedMedians,
rowWeightedSds, rowWeightedVars
Loading required package: GenomicRanges
Loading required package: stats4
Loading required package: BiocGenerics
Attaching package: 'BiocGenerics'
The following objects are masked from 'package:stats':
IQR, mad, sd, var, xtabs
The following objects are masked from 'package:base':
Filter, Find, Map, Position, Reduce, anyDuplicated, append,
as.data.frame, basename, cbind, colnames, dirname, do.call,
duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted,
lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin,
pmin.int, rank, rbind, rownames, sapply, setdiff, sort, table,
tapply, union, unique, unsplit, which.max, which.min
Loading required package: S4Vectors
Attaching package: 'S4Vectors'
The following objects are masked from 'package:base':
I, expand.grid, unname
Loading required package: IRanges
Loading required package: GenomeInfoDb
Loading required package: Biobase
Welcome to Bioconductor
Vignettes contain introductory material; view with
'browseVignettes()'. To cite Bioconductor, see
'citation("Biobase")', and for packages 'citation("pkgname")'.
Attaching package: 'Biobase'
The following object is masked from 'package:MatrixGenerics':
rowMedians
The following objects are masked from 'package:matrixStats':
anyMissing, rowMedians
Loading required package: SingleCellExperiment
Loading required package: DelayedArray
Loading required package: Matrix
Attaching package: 'Matrix'
The following object is masked from 'package:S4Vectors':
expand
Attaching package: 'DelayedArray'
The following objects are masked from 'package:base':
aperm, apply, rowsum, scale, sweep
Attaching package: 'singleCellTK'
The following object is masked from 'package:BiocGenerics':
plotPCA
>
> test_check("singleCellTK")
Estimating GSVA scores for 34 gene sets.
Estimating ECDFs with Gaussian kernels
Performing log-normalization
0% 10 20 30 40 50 60 70 80 90 100%
[----|----|----|----|----|----|----|----|----|----|
**************************************************|
Calculating gene variances
0% 10 20 30 40 50 60 70 80 90 100%
[----|----|----|----|----|----|----|----|----|----|
**************************************************|
Calculating feature variances of standardized and clipped values
0% 10 20 30 40 50 60 70 80 90 100%
[----|----|----|----|----|----|----|----|----|----|
**************************************************|
|
| | 0%
|
|======================================================================| 100%
[22:09:41] WARNING: amalgamation/../src/learner.cc:1095: Starting in XGBoost 1.3.0, the default evaluation metric used with the objective 'binary:logistic' was changed from 'error' to 'logloss'. Explicitly set eval_metric if you'd like to restore the old behavior.
[22:09:42] WARNING: amalgamation/../src/learner.cc:1095: Starting in XGBoost 1.3.0, the default evaluation metric used with the objective 'binary:logistic' was changed from 'error' to 'logloss'. Explicitly set eval_metric if you'd like to restore the old behavior.
[22:10:04] WARNING: amalgamation/../src/learner.cc:1095: Starting in XGBoost 1.3.0, the default evaluation metric used with the objective 'binary:logistic' was changed from 'error' to 'logloss'. Explicitly set eval_metric if you'd like to restore the old behavior.
[ FAIL 0 | WARN 12 | SKIP 0 | PASS 46 ]
>
> proc.time()
user system elapsed
109.258 2.847 110.358
singleCellTK.Rcheck/singleCellTK-Ex.timings
| name | user | system | elapsed | |
| MitoGenes | 0.002 | 0.000 | 0.002 | |
| SEG | 0.002 | 0.000 | 0.002 | |
| calcEffectSizes | 0.144 | 0.008 | 0.152 | |
| combineSCE | 1.971 | 0.016 | 1.987 | |
| computeZScore | 0.321 | 0.040 | 0.362 | |
| convertGeneIDs | 3.455 | 0.155 | 3.612 | |
| convertSCEToSeurat | 1.932 | 0.099 | 2.032 | |
| convertSeuratToSCE | 0.504 | 0.000 | 0.504 | |
| dedupRowNames | 0.055 | 0.000 | 0.055 | |
| detectCellOutlier | 6.455 | 0.020 | 6.475 | |
| diffAbundanceFET | 0.044 | 0.000 | 0.044 | |
| discreteColorPalette | 0.007 | 0.000 | 0.007 | |
| distinctColors | 0.002 | 0.000 | 0.002 | |
| downSampleCells | 0.747 | 0.016 | 0.763 | |
| downSampleDepth | 0.581 | 0.004 | 0.585 | |
| enrichRSCE | 0.330 | 0.015 | 1.750 | |
| exportSCE | 0.002 | 0.000 | 0.002 | |
| exportSCEtoAnnData | 0.141 | 0.012 | 0.153 | |
| exportSCEtoFlatFile | 0.119 | 0.012 | 0.131 | |
| featureIndex | 0.027 | 0.000 | 0.027 | |
| findMarkerDiffExp | 5.122 | 0.140 | 5.262 | |
| findMarkerTopTable | 4.825 | 0.052 | 4.876 | |
| generateSimulatedData | 0.039 | 0.000 | 0.039 | |
| getBiomarker | 0.036 | 0.019 | 0.056 | |
| getMSigDBTable | 0.000 | 0.003 | 0.004 | |
| getTSNE | 0.35 | 0.00 | 0.35 | |
| getTopHVG | 0.312 | 0.012 | 0.324 | |
| getUMAP | 4.555 | 0.040 | 4.588 | |
| importAnnData | 0.001 | 0.000 | 0.000 | |
| importBUStools | 0.302 | 0.000 | 0.302 | |
| importCellRanger | 1.170 | 0.001 | 1.170 | |
| importCellRangerV2Sample | 0.34 | 0.00 | 0.34 | |
| importCellRangerV3Sample | 0.467 | 0.003 | 0.471 | |
| importDropEst | 0.39 | 0.00 | 0.39 | |
| importExampleData | 15.122 | 1.351 | 17.427 | |
| importGeneSetsFromCollection | 0.679 | 0.016 | 0.695 | |
| importGeneSetsFromGMT | 0.059 | 0.000 | 0.059 | |
| importGeneSetsFromList | 0.148 | 0.004 | 0.152 | |
| importGeneSetsFromMSigDB | 3.907 | 0.252 | 4.160 | |
| importMitoGeneSet | 0.048 | 0.003 | 0.052 | |
| importOptimus | 0.001 | 0.000 | 0.001 | |
| importSEQC | 0.282 | 0.000 | 0.283 | |
| importSTARsolo | 0.367 | 0.000 | 0.368 | |
| iterateSimulations | 0.487 | 0.000 | 0.487 | |
| mergeSCEColData | 0.562 | 0.020 | 0.581 | |
| mouseBrainSubsetSCE | 0.001 | 0.000 | 0.001 | |
| msigdb_table | 0.001 | 0.000 | 0.001 | |
| plotBarcodeRankDropsResults | 1.231 | 0.008 | 1.239 | |
| plotBarcodeRankScatter | 0.786 | 0.000 | 0.786 | |
| plotBatchVariance | 0.303 | 0.000 | 0.302 | |
| plotBcdsResults | 8.546 | 0.100 | 7.753 | |
| plotBiomarker | 0.739 | 0.004 | 0.743 | |
| plotClusterAbundance | 0.637 | 0.000 | 0.638 | |
| plotCxdsResults | 6.082 | 0.057 | 6.129 | |
| plotDEGHeatmap | 4.808 | 0.012 | 4.821 | |
| plotDEGRegression | 3.527 | 0.028 | 3.541 | |
| plotDEGViolin | 5.195 | 0.136 | 5.319 | |
| plotDecontXResults | 6.613 | 0.060 | 6.672 | |
| plotDimRed | 0.280 | 0.032 | 0.312 | |
| plotDoubletFinderResults | 21.733 | 0.128 | 21.851 | |
| plotEmptyDropsResults | 6.821 | 0.024 | 6.845 | |
| plotEmptyDropsScatter | 6.677 | 0.024 | 6.702 | |
| plotMASTThresholdGenes | 1.640 | 0.036 | 1.677 | |
| plotMarkerDiffExp | 5.553 | 0.008 | 5.560 | |
| plotPCA | 0.598 | 0.000 | 0.599 | |
| plotRunPerCellQCResults | 0.002 | 0.000 | 0.001 | |
| plotSCEBarAssayData | 0.118 | 0.000 | 0.118 | |
| plotSCEBarColData | 0.093 | 0.000 | 0.093 | |
| plotSCEBatchFeatureMean | 0.228 | 0.000 | 0.228 | |
| plotSCEDensity | 0.165 | 0.008 | 0.172 | |
| plotSCEDensityAssayData | 0.135 | 0.000 | 0.135 | |
| plotSCEDensityColData | 0.165 | 0.000 | 0.165 | |
| plotSCEDimReduceColData | 0.826 | 0.004 | 0.829 | |
| plotSCEDimReduceFeatures | 0.413 | 0.004 | 0.417 | |
| plotSCEHeatmap | 0.857 | 0.036 | 0.893 | |
| plotSCEScatter | 0.379 | 0.008 | 0.387 | |
| plotSCEViolin | 0.175 | 0.004 | 0.179 | |
| plotSCEViolinAssayData | 0.194 | 0.008 | 0.201 | |
| plotSCEViolinColData | 0.171 | 0.004 | 0.176 | |
| plotScDblFinderResults | 22.810 | 0.404 | 23.189 | |
| plotScdsHybridResults | 8.391 | 0.100 | 7.631 | |
| plotScrubletResults | 0.001 | 0.000 | 0.002 | |
| plotTSNE | 0.668 | 0.004 | 0.672 | |
| plotTopHVG | 0.475 | 0.000 | 0.475 | |
| plotUMAP | 5.710 | 0.041 | 5.740 | |
| readSingleCellMatrix | 0.003 | 0.000 | 0.004 | |
| reportCellQC | 0.219 | 0.000 | 0.220 | |
| reportDropletQC | 0.002 | 0.000 | 0.002 | |
| reportQCTool | 0.211 | 0.000 | 0.212 | |
| retrieveSCEIndex | 0.013 | 0.000 | 0.013 | |
| runANOVA | 1.205 | 0.000 | 1.205 | |
| runBBKNN | 0 | 0 | 0 | |
| runBarcodeRankDrops | 0.655 | 0.000 | 0.655 | |
| runBcds | 2.404 | 0.063 | 1.599 | |
| runCellQC | 0.223 | 0.001 | 0.223 | |
| runComBatSeq | 0.468 | 0.000 | 0.468 | |
| runCxds | 0.698 | 0.007 | 0.706 | |
| runCxdsBcdsHybrid | 2.566 | 0.020 | 1.726 | |
| runDEAnalysis | 1.086 | 0.007 | 1.094 | |
| runDESeq2 | 4.998 | 0.000 | 4.998 | |
| runDecontX | 6.406 | 0.068 | 6.474 | |
| runDimReduce | 1.145 | 0.004 | 1.149 | |
| runDoubletFinder | 17.197 | 0.124 | 17.321 | |
| runDropletQC | 0.002 | 0.000 | 0.001 | |
| runEmptyDrops | 6.440 | 0.003 | 6.445 | |
| runFastMNN | 1.592 | 0.064 | 1.656 | |
| runFeatureSelection | 0.198 | 0.000 | 0.197 | |
| runGSVA | 0.859 | 0.004 | 0.863 | |
| runKMeans | 0.629 | 0.004 | 0.633 | |
| runLimmaBC | 0.104 | 0.000 | 0.105 | |
| runLimmaDE | 0.897 | 0.000 | 0.898 | |
| runMAST | 3.831 | 0.007 | 3.799 | |
| runMNNCorrect | 0.651 | 0.000 | 0.651 | |
| runNormalization | 1.545 | 0.052 | 1.597 | |
| runPerCellQC | 0.401 | 0.020 | 0.421 | |
| runSCANORAMA | 0 | 0 | 0 | |
| runSCMerge | 0.001 | 0.000 | 0.001 | |
| runScDblFinder | 15.715 | 0.395 | 16.095 | |
| runScranSNN | 0.613 | 0.004 | 0.618 | |
| runScrublet | 0.001 | 0.000 | 0.001 | |
| runSeurat | 40.986 | 0.120 | 41.106 | |
| runSingleR | 0.048 | 0.004 | 0.053 | |
| runVAM | 0.887 | 0.015 | 0.902 | |
| runWilcox | 1.016 | 0.008 | 1.023 | |
| runZINBWaVE | 0.002 | 0.000 | 0.001 | |
| sampleSummaryStats | 0.475 | 0.000 | 0.475 | |
| scaterCPM | 0.180 | 0.000 | 0.179 | |
| scaterPCA | 0.720 | 0.000 | 0.719 | |
| scaterlogNormCounts | 0.887 | 0.000 | 0.887 | |
| sce | 0.001 | 0.000 | 0.001 | |
| scranModelGeneVar | 0.292 | 0.008 | 0.300 | |
| sctkListGeneSetCollections | 0.256 | 0.004 | 0.260 | |
| sctkPythonInstallConda | 0 | 0 | 0 | |
| sctkPythonInstallVirtualEnv | 0.000 | 0.000 | 0.001 | |
| selectSCTKConda | 0 | 0 | 0 | |
| selectSCTKVirtualEnvironment | 0 | 0 | 0 | |
| setSCTKDisplayRow | 0.445 | 0.004 | 0.449 | |
| seuratComputeHeatmap | 0.001 | 0.000 | 0.001 | |
| seuratComputeJackStraw | 0.001 | 0.000 | 0.001 | |
| seuratElbowPlot | 0.001 | 0.000 | 0.002 | |
| seuratFindClusters | 0.002 | 0.000 | 0.001 | |
| seuratFindHVG | 0.001 | 0.000 | 0.001 | |
| seuratICA | 0.001 | 0.000 | 0.001 | |
| seuratJackStrawPlot | 0.002 | 0.000 | 0.002 | |
| seuratNormalizeData | 0.001 | 0.000 | 0.001 | |
| seuratPCA | 0.001 | 0.000 | 0.001 | |
| seuratPlotHVG | 0.002 | 0.000 | 0.001 | |
| seuratReductionPlot | 0.001 | 0.000 | 0.001 | |
| seuratRunUMAP | 0.001 | 0.000 | 0.001 | |
| seuratSCTransform | 3.449 | 0.128 | 3.577 | |
| seuratScaleData | 0.001 | 0.000 | 0.001 | |
| singleCellTK | 0 | 0 | 0 | |
| subDiffEx | 0.606 | 0.000 | 0.606 | |
| subsetSCECols | 0.224 | 0.000 | 0.225 | |
| subsetSCERows | 0.598 | 0.000 | 0.598 | |
| summarizeSCE | 0.064 | 0.000 | 0.064 | |
| trimCounts | 0.306 | 0.012 | 0.318 | |
| visPlot | 0.706 | 0.000 | 0.706 | |