| Back to Multiple platform build/check report for BioC 3.19: simplified long |
|
This page was generated on 2024-03-28 11:41:00 -0400 (Thu, 28 Mar 2024).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | R Under development (unstable) (2024-03-18 r86148) -- "Unsuffered Consequences" | 4708 |
| palomino3 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2024-03-16 r86144 ucrt) -- "Unsuffered Consequences" | 4446 |
| lconway | macOS 12.7.1 Monterey | x86_64 | R Under development (unstable) (2024-03-18 r86148) -- "Unsuffered Consequences" | 4471 |
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) | aarch64 | R Under development (unstable) (2024-03-19 r86153) -- "Unsuffered Consequences" | 4426 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1325/2270 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| MsBackendRawFileReader 1.9.1 (landing page) Christian Panse
| nebbiolo1 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | OK | OK |  | ||||||||
| palomino3 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | | ||||||||
| lconway | macOS 12.7.1 Monterey / x86_64 | OK | OK | OK | OK | | ||||||||
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) / aarch64 | OK | OK | OK | ||||||||||
|
To the developers/maintainers of the MsBackendRawFileReader package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/MsBackendRawFileReader.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. - See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host. |
| Package: MsBackendRawFileReader |
| Version: 1.9.1 |
| Command: /home/biocbuild/R/R-4.4-devel-2024.03.20/bin/R CMD check --install=check:MsBackendRawFileReader.install-out.txt --library=/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library --no-vignettes --timings MsBackendRawFileReader_1.9.1.tar.gz |
| StartedAt: 2024-03-28 07:34:34 -0000 (Thu, 28 Mar 2024) |
| EndedAt: 2024-03-28 07:38:34 -0000 (Thu, 28 Mar 2024) |
| EllapsedTime: 239.4 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: MsBackendRawFileReader.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/R/R-4.4-devel-2024.03.20/bin/R CMD check --install=check:MsBackendRawFileReader.install-out.txt --library=/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library --no-vignettes --timings MsBackendRawFileReader_1.9.1.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.19-bioc/meat/MsBackendRawFileReader.Rcheck’
* using R Under development (unstable) (2024-03-19 r86153)
* using platform: aarch64-unknown-linux-gnu
* R was compiled by
gcc (GCC) 10.3.1
GNU Fortran (GCC) 10.3.1
* running under: openEuler 22.03 (LTS-SP1)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘MsBackendRawFileReader/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘MsBackendRawFileReader’ version ‘1.9.1’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘MsBackendRawFileReader’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking whether startup messages can be suppressed ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
filterScan,MsBackendRawFileReader : <anonymous>: no visible global
function definition for ‘scanIndex’
peaksData,MsBackendRawFileReader: no visible global function definition
for ‘scanIndex’
Undefined global functions or variables:
scanIndex
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
ioBenchmark 40.386 4.329 18.496
MsBackendRawFileReader 6.096 1.228 6.701
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 1 NOTE
See
‘/home/biocbuild/bbs-3.19-bioc/meat/MsBackendRawFileReader.Rcheck/00check.log’
for details.
MsBackendRawFileReader.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R-4.4-devel-2024.03.20/bin/R CMD INSTALL MsBackendRawFileReader ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library’ * installing *source* package ‘MsBackendRawFileReader’ ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MsBackendRawFileReader)
MsBackendRawFileReader.Rcheck/tests/testthat.Rout
R Under development (unstable) (2024-03-19 r86153) -- "Unsuffered Consequences"
Copyright (C) 2024 The R Foundation for Statistical Computing
Platform: aarch64-unknown-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library("testthat")
> library("MsBackendRawFileReader")
Loading required package: Spectra
Loading required package: S4Vectors
Loading required package: stats4
Loading required package: BiocGenerics
Attaching package: 'BiocGenerics'
The following objects are masked from 'package:stats':
IQR, mad, sd, var, xtabs
The following objects are masked from 'package:base':
Filter, Find, Map, Position, Reduce, anyDuplicated, aperm, append,
as.data.frame, basename, cbind, colnames, dirname, do.call,
duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted,
lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin,
pmin.int, rank, rbind, rownames, sapply, setdiff, table, tapply,
union, unique, unsplit, which.max, which.min
Attaching package: 'S4Vectors'
The following object is masked from 'package:utils':
findMatches
The following objects are masked from 'package:base':
I, expand.grid, unname
Loading required package: BiocParallel
Loading required package: ProtGenerics
Attaching package: 'ProtGenerics'
The following object is masked from 'package:stats':
smooth
> library("Spectra")
>
>
> sample_raw_file <- file.path(system.file(package = "rawrr"),
+ 'extdata', 'sample.raw')
>
> sample_mzXML_file <- file.path(path.package(package = 'MsBackendRawFileReader'),
+ 'extdata', 'sample.mzXML')
>
>
> sample_raw <- backendInitialize(MsBackendRawFileReader::MsBackendRawFileReader(), files = sample_raw_file)
>
>
> #sample_mzr <- backendInitialize(MsBackendMzR(), files = sample_mzXML_file)
>
>
> mgf_file <- file.path(system.file(package = "MsBackendRawFileReader"),
+ 'extdata', '3159619b11ed_4590_9594.mgf')
>
>
> rv <- lapply(1:2, function(x){
+ file.copy(from = sample_raw_file, to = tempfile(fileext='.raw'))})
>
>
> register(SnowParam(workers = 1, type = "SOCK") , default = TRUE);
> sample_raw_2 <- backendInitialize(MsBackendRawFileReader(),
+ files = file.path(tempdir(),
+ list.files(path = tempdir(), pattern = 'raw$')))
>
>
> test_check("MsBackendRawFileReader")
[ FAIL 0 | WARN 1 | SKIP 2 | PASS 21 ]
══ Skipped tests (2) ═══════════════════════════════════════════════════════════
• isFALSE(file.exists(sample_mzXML_file)) is TRUE (1):
'test_MsBackendMzR_MsBackendRawFileReader.R:1:1'
• isFALSE(require(MsBackendRawMgf)) is TRUE (1): 'test_top_n_mgf.R:1:1'
[ FAIL 0 | WARN 1 | SKIP 2 | PASS 21 ]
>
>
> be <- Spectra::backendInitialize(MsBackendRawFileReader::MsBackendRawFileReader(),
+ files = c(sample_raw_file))
>
> ## Run the MsBackend spectra variable test suite
> test_suite <- system.file("test_backends", "test_MsBackend",
+ package = "Spectra")
>
> #res <- test_file(paste0(test_suite, "/test_spectra_variables.R"),
> # reporter = check_reporter(), stop_on_failure = TRUE)
>
>
> ## Run the whole suite.
> res <- test_dir(test_suite, stop_on_failure = TRUE)
✔ | F W S OK | Context
⠏ | 0 | peaks_variables
⠙ | 2 | peaks_variables
⠸ | 4 | peaks_variables
✔ | 4 | peaks_variables [5.0s]
⠏ | 0 | spectra_subsetting
⠋ | 1 | spectra_subsetting
⠹ | 13 | spectra_subsetting
⠼ | 25 | spectra_subsetting
⠸ | 34 | spectra_subsetting
⠼ | 45 | spectra_subsetting
⠼ | 55 | spectra_subsetting
⠼ | 65 | spectra_subsetting
⠴ | 76 | spectra_subsetting
⠼ | 85 | spectra_subsetting
⠙ | 92 | spectra_subsetting
⠹ | 103 | spectra_subsetting
⠼ | 115 | spectra_subsetting
⠦ | 127 | spectra_subsetting
⠴ | 136 | spectra_subsetting
⠼ | 145 | spectra_subsetting
⠙ | 152 | spectra_subsetting
⠹ | 163 | spectra_subsetting
⠹ | 173 | spectra_subsetting
⠋ | 181 | spectra_subsetting
⠏ | 190 | spectra_subsetting
⠙ | 202 | spectra_subsetting
⠋ | 211 | spectra_subsetting
⠹ | 223 | spectra_subsetting
⠼ | 235 | spectra_subsetting
⠦ | 247 | spectra_subsetting
⠇ | 259 | spectra_subsetting
⠇ | 269 | spectra_subsetting
⠏ | 280 | spectra_subsetting
⠙ | 292 | spectra_subsetting
⠸ | 304 | spectra_subsetting
⠸ | 314 | spectra_subsetting
⠼ | 325 | spectra_subsetting
⠇ | 329 | spectra_subsetting
⠏ | 340 | spectra_subsetting
⠏ | 350 | spectra_subsetting
⠋ | 361 | spectra_subsetting
⠏ | 370 | spectra_subsetting
⠙ | 382 | spectra_subsetting
⠹ | 393 | spectra_subsetting
⠋ | 401 | spectra_subsetting
⠙ | 412 | spectra_subsetting
⠸ | 424 | spectra_subsetting
⠴ | 436 | spectra_subsetting
⠧ | 448 | spectra_subsetting
⠏ | 460 | spectra_subsetting
⠙ | 472 | spectra_subsetting
⠸ | 484 | spectra_subsetting
⠴ | 496 | spectra_subsetting
⠧ | 508 | spectra_subsetting
⠇ | 519 | spectra_subsetting
⠴ | 526 | spectra_subsetting
⠦ | 537 | spectra_subsetting
⠦ | 547 | spectra_subsetting
⠧ | 558 | spectra_subsetting
⠧ | 568 | spectra_subsetting
⠏ | 580 | spectra_subsetting
⠏ | 590 | spectra_subsetting
⠋ | 601 | spectra_subsetting
⠹ | 613 | spectra_subsetting
⠼ | 625 | spectra_subsetting
⠦ | 637 | spectra_subsetting
⠦ | 647 | spectra_subsetting
⠼ | 655 | spectra_subsetting
⠦ | 667 | spectra_subsetting
⠇ | 679 | spectra_subsetting
⠋ | 691 | spectra_subsetting
⠹ | 703 | spectra_subsetting
⠸ | 714 | spectra_subsetting
⠙ | 722 | spectra_subsetting
⠹ | 733 | spectra_subsetting
⠹ | 743 | spectra_subsetting
⠸ | 754 | spectra_subsetting
⠴ | 766 | spectra_subsetting
⠧ | 778 | spectra_subsetting
⠧ | 788 | spectra_subsetting
⠇ | 799 | spectra_subsetting
⠇ | 809 | spectra_subsetting
⠏ | 820 | spectra_subsetting
⠙ | 832 | spectra_subsetting
⠸ | 844 | spectra_subsetting
⠹ | 853 | spectra_subsetting
⠼ | 865 | spectra_subsetting
⠦ | 877 | spectra_subsetting
⠇ | 889 | spectra_subsetting
⠋ | 901 | spectra_subsetting
⠹ | 913 | spectra_subsetting
⠹ | 923 | spectra_subsetting
⠸ | 934 | spectra_subsetting
⠴ | 946 | spectra_subsetting
⠧ | 958 | spectra_subsetting
⠏ | 970 | spectra_subsetting
⠇ | 979 | spectra_subsetting
⠇ | 989 | spectra_subsetting
⠏ | 1000 | spectra_subsetting
⠙ | 1012 | spectra_subsetting
⠸ | 1024 | spectra_subsetting
⠴ | 1036 | spectra_subsetting
⠴ | 1046 | spectra_subsetting
⠦ | 1057 | spectra_subsetting
⠇ | 1069 | spectra_subsetting
⠋ | 1081 | spectra_subsetting
⠹ | 1093 | spectra_subsetting
⠼ | 1105 | spectra_subsetting
⠼ | 1115 | spectra_subsetting
⠴ | 1126 | spectra_subsetting
⠧ | 1138 | spectra_subsetting
⠏ | 1150 | spectra_subsetting
⠙ | 1162 | spectra_subsetting
⠙ | 1172 | spectra_subsetting
⠏ | 1180 | spectra_subsetting
⠏ | 1190 | spectra_subsetting
⠏ | 1200 | spectra_subsetting
⠏ | 1210 | spectra_subsetting
⠇ | 1219 | spectra_subsetting
⠧ | 1228 | spectra_subsetting
⠧ | 1238 | spectra_subsetting
⠧ | 1248 | spectra_subsetting
⠧ | 1258 | spectra_subsetting
⠏ | 1270 | spectra_subsetting
⠙ | 1282 | spectra_subsetting
⠸ | 1294 | spectra_subsetting
⠸ | 1304 | spectra_subsetting
⠼ | 1315 | spectra_subsetting
⠦ | 1327 | spectra_subsetting
⠇ | 1339 | spectra_subsetting
⠋ | 1351 | spectra_subsetting
⠹ | 1363 | spectra_subsetting
⠙ | 1372 | spectra_subsetting
⠸ | 1384 | spectra_subsetting
⠸ | 1394 | spectra_subsetting
⠼ | 1405 | spectra_subsetting
⠼ | 1415 | spectra_subsetting
⠼ | 1425 | spectra_subsetting
⠸ | 1434 | spectra_subsetting
⠸ | 1444 | spectra_subsetting
⠼ | 1455 | spectra_subsetting
⠼ | 1465 | spectra_subsetting
⠦ | 1477 | spectra_subsetting
⠇ | 1489 | spectra_subsetting
⠇ | 1499 | spectra_subsetting
⠏ | 1510 | spectra_subsetting
⠙ | 1522 | spectra_subsetting
⠸ | 1534 | spectra_subsetting
⠴ | 1546 | spectra_subsetting
⠧ | 1558 | spectra_subsetting
⠧ | 1568 | spectra_subsetting
⠇ | 1579 | spectra_subsetting
⠋ | 1591 | spectra_subsetting
⠹ | 1603 | spectra_subsetting
⠼ | 1615 | spectra_subsetting
⠦ | 1627 | spectra_subsetting
⠦ | 1637 | spectra_subsetting
⠧ | 1648 | spectra_subsetting
⠇ | 1659 | spectra_subsetting
⠇ | 1669 | spectra_subsetting
⠋ | 1681 | spectra_subsetting
⠹ | 1693 | spectra_subsetting
⠼ | 1705 | spectra_subsetting
⠦ | 1717 | spectra_subsetting
⠦ | 1727 | spectra_subsetting
⠇ | 1729 | spectra_subsetting
⠋ | 1731 | spectra_subsetting
⠹ | 1733 | spectra_subsetting
⠼ | 1735 | spectra_subsetting
⠦ | 1737 | spectra_subsetting
⠇ | 1739 | spectra_subsetting
⠋ | 1741 | spectra_subsetting
⠹ | 1743 | spectra_subsetting
⠼ | 1745 | spectra_subsetting
⠦ | 1747 | spectra_subsetting
⠇ | 1749 | spectra_subsetting
⠋ | 1751 | spectra_subsetting
⠹ | 1753 | spectra_subsetting
⠼ | 1755 | spectra_subsetting
⠦ | 1757 | spectra_subsetting
⠇ | 1759 | spectra_subsetting
⠋ | 1761 | spectra_subsetting
⠹ | 1763 | spectra_subsetting
⠼ | 1765 | spectra_subsetting
⠦ | 1767 | spectra_subsetting
⠇ | 1769 | spectra_subsetting
⠋ | 1771 | spectra_subsetting
⠹ | 1773 | spectra_subsetting
⠼ | 1775 | spectra_subsetting
⠦ | 1777 | spectra_subsetting
⠇ | 1779 | spectra_subsetting
⠋ | 1781 | spectra_subsetting
⠹ | 1783 | spectra_subsetting
⠼ | 1785 | spectra_subsetting
⠦ | 1787 | spectra_subsetting
⠇ | 1789 | spectra_subsetting
⠋ | 1791 | spectra_subsetting
⠹ | 1793 | spectra_subsetting
⠼ | 1795 | spectra_subsetting
⠦ | 1797 | spectra_subsetting
⠇ | 1799 | spectra_subsetting
⠋ | 1801 | spectra_subsetting
⠹ | 1803 | spectra_subsetting
⠼ | 1805 | spectra_subsetting
⠦ | 1807 | spectra_subsetting
⠇ | 1809 | spectra_subsetting
⠋ | 1811 | spectra_subsetting
⠹ | 1813 | spectra_subsetting
⠼ | 1815 | spectra_subsetting
⠦ | 1817 | spectra_subsetting
⠇ | 1819 | spectra_subsetting
⠋ | 1821 | spectra_subsetting
⠹ | 1823 | spectra_subsetting
⠼ | 1825 | spectra_subsetting
⠦ | 1827 | spectra_subsetting
⠇ | 1829 | spectra_subsetting
⠋ | 1831 | spectra_subsetting
⠹ | 1833 | spectra_subsetting
⠼ | 1835 | spectra_subsetting
⠦ | 1837 | spectra_subsetting
⠇ | 1839 | spectra_subsetting
⠋ | 1841 | spectra_subsetting
⠹ | 1843 | spectra_subsetting
⠼ | 1845 | spectra_subsetting
⠦ | 1847 | spectra_subsetting
⠇ | 1849 | spectra_subsetting
⠋ | 1851 | spectra_subsetting
⠹ | 1853 | spectra_subsetting
⠼ | 1855 | spectra_subsetting
⠦ | 1857 | spectra_subsetting
⠇ | 1859 | spectra_subsetting
⠋ | 1861 | spectra_subsetting
⠹ | 1863 | spectra_subsetting
⠼ | 1865 | spectra_subsetting
⠦ | 1867 | spectra_subsetting
⠇ | 1869 | spectra_subsetting
⠋ | 1871 | spectra_subsetting
⠹ | 1873 | spectra_subsetting
⠼ | 1875 | spectra_subsetting
⠦ | 1877 | spectra_subsetting
⠇ | 1879 | spectra_subsetting
⠋ | 1881 | spectra_subsetting
⠹ | 1883 | spectra_subsetting
⠼ | 1885 | spectra_subsetting
⠦ | 1887 | spectra_subsetting
⠇ | 1889 | spectra_subsetting
⠋ | 1891 | spectra_subsetting
⠹ | 1893 | spectra_subsetting
⠼ | 1895 | spectra_subsetting
⠦ | 1897 | spectra_subsetting
⠇ | 1899 | spectra_subsetting
⠋ | 1901 | spectra_subsetting
⠹ | 1903 | spectra_subsetting
⠼ | 1905 | spectra_subsetting
⠦ | 1907 | spectra_subsetting
⠇ | 1909 | spectra_subsetting
⠋ | 1911 | spectra_subsetting
⠹ | 1913 | spectra_subsetting
⠼ | 1915 | spectra_subsetting
⠦ | 1917 | spectra_subsetting
⠇ | 1919 | spectra_subsetting
⠋ | 1921 | spectra_subsetting
⠹ | 1923 | spectra_subsetting
⠼ | 1925 | spectra_subsetting
⠦ | 1927 | spectra_subsetting
⠇ | 1929 | spectra_subsetting
⠏ | 1930 | spectra_subsetting
⠙ | 1932 | spectra_subsetting
⠸ | 1934 | spectra_subsetting
⠴ | 1936 | spectra_subsetting
⠧ | 1938 | spectra_subsetting
⠏ | 1940 | spectra_subsetting
⠙ | 1942 | spectra_subsetting
⠸ | 1944 | spectra_subsetting
⠴ | 1946 | spectra_subsetting
⠧ | 1948 | spectra_subsetting
⠏ | 1950 | spectra_subsetting
⠙ | 1952 | spectra_subsetting
⠸ | 1954 | spectra_subsetting
⠴ | 1956 | spectra_subsetting
⠧ | 1958 | spectra_subsetting
⠏ | 1960 | spectra_subsetting
⠙ | 1962 | spectra_subsetting
⠸ | 1964 | spectra_subsetting
⠴ | 1966 | spectra_subsetting
⠧ | 1968 | spectra_subsetting
⠏ | 1970 | spectra_subsetting
⠙ | 1972 | spectra_subsetting
⠸ | 1974 | spectra_subsetting
⠴ | 1976 | spectra_subsetting
⠧ | 1978 | spectra_subsetting
⠏ | 1980 | spectra_subsetting
⠙ | 1982 | spectra_subsetting
⠸ | 1984 | spectra_subsetting
⠴ | 1986 | spectra_subsetting
⠧ | 1988 | spectra_subsetting
⠏ | 1990 | spectra_subsetting
⠙ | 1992 | spectra_subsetting
⠸ | 1994 | spectra_subsetting
⠴ | 1996 | spectra_subsetting
⠧ | 1998 | spectra_subsetting
⠏ | 2000 | spectra_subsetting
⠙ | 2002 | spectra_subsetting
⠸ | 2004 | spectra_subsetting
⠴ | 2006 | spectra_subsetting
⠧ | 2008 | spectra_subsetting
⠏ | 2010 | spectra_subsetting
⠙ | 2012 | spectra_subsetting
⠹ | 2013 | spectra_subsetting
⠼ | 2015 | spectra_subsetting
⠦ | 2017 | spectra_subsetting
⠇ | 2019 | spectra_subsetting
⠏ | 2020 | spectra_subsetting
⠙ | 2022 | spectra_subsetting
⠸ | 2024 | spectra_subsetting
⠴ | 2026 | spectra_subsetting
⠧ | 2028 | spectra_subsetting
⠏ | 2030 | spectra_subsetting
⠙ | 2032 | spectra_subsetting
⠸ | 2034 | spectra_subsetting
⠴ | 2036 | spectra_subsetting
⠧ | 2038 | spectra_subsetting
⠏ | 2040 | spectra_subsetting
⠙ | 2042 | spectra_subsetting
⠸ | 2044 | spectra_subsetting
⠴ | 2046 | spectra_subsetting
⠧ | 2048 | spectra_subsetting
⠏ | 2050 | spectra_subsetting
⠙ | 2052 | spectra_subsetting
⠸ | 2054 | spectra_subsetting
⠴ | 2056 | spectra_subsetting
⠧ | 2058 | spectra_subsetting
⠏ | 2060 | spectra_subsetting
⠙ | 2062 | spectra_subsetting
⠸ | 2064 | spectra_subsetting
⠴ | 2066 | spectra_subsetting
⠧ | 2068 | spectra_subsetting
⠏ | 2070 | spectra_subsetting
⠙ | 2072 | spectra_subsetting
⠸ | 2074 | spectra_subsetting
⠴ | 2076 | spectra_subsetting
⠧ | 2078 | spectra_subsetting
⠏ | 2080 | spectra_subsetting
⠙ | 2082 | spectra_subsetting
⠸ | 2084 | spectra_subsetting
⠴ | 2086 | spectra_subsetting
⠧ | 2088 | spectra_subsetting
⠏ | 2090 | spectra_subsetting
⠙ | 2092 | spectra_subsetting
⠸ | 2094 | spectra_subsetting
⠴ | 2096 | spectra_subsetting
⠧ | 2098 | spectra_subsetting
⠏ | 2100 | spectra_subsetting
⠙ | 2102 | spectra_subsetting
⠸ | 2104 | spectra_subsetting
⠴ | 2106 | spectra_subsetting
⠧ | 2108 | spectra_subsetting
⠏ | 2110 | spectra_subsetting
⠙ | 2112 | spectra_subsetting
⠸ | 2114 | spectra_subsetting
⠴ | 2116 | spectra_subsetting
⠧ | 2118 | spectra_subsetting
⠏ | 2120 | spectra_subsetting
⠙ | 2122 | spectra_subsetting
⠸ | 2124 | spectra_subsetting
⠴ | 2126 | spectra_subsetting
⠧ | 2128 | spectra_subsetting
⠏ | 2130 | spectra_subsetting
⠙ | 2132 | spectra_subsetting
⠸ | 2134 | spectra_subsetting
⠴ | 2136 | spectra_subsetting
⠧ | 2138 | spectra_subsetting
⠏ | 2140 | spectra_subsetting
⠙ | 2142 | spectra_subsetting
⠸ | 2144 | spectra_subsetting
⠴ | 2146 | spectra_subsetting
⠧ | 2148 | spectra_subsetting
⠏ | 2150 | spectra_subsetting
⠙ | 2152 | spectra_subsetting
⠸ | 2154 | spectra_subsetting
⠴ | 2156 | spectra_subsetting
⠧ | 2158 | spectra_subsetting
⠏ | 2160 | spectra_subsetting
⠙ | 2162 | spectra_subsetting
⠸ | 2164 | spectra_subsetting
⠴ | 2166 | spectra_subsetting
⠧ | 2168 | spectra_subsetting
⠏ | 2170 | spectra_subsetting
⠙ | 2172 | spectra_subsetting
⠸ | 2174 | spectra_subsetting
⠴ | 2176 | spectra_subsetting
⠧ | 2178 | spectra_subsetting
⠏ | 2180 | spectra_subsetting
⠙ | 2182 | spectra_subsetting
⠸ | 2184 | spectra_subsetting
⠼ | 2185 | spectra_subsetting
⠦ | 2187 | spectra_subsetting
⠇ | 2189 | spectra_subsetting
⠋ | 2191 | spectra_subsetting
⠹ | 2193 | spectra_subsetting
⠼ | 2195 | spectra_subsetting
⠦ | 2197 | spectra_subsetting
⠇ | 2199 | spectra_subsetting
⠋ | 2201 | spectra_subsetting
⠹ | 2203 | spectra_subsetting
⠼ | 2205 | spectra_subsetting
⠦ | 2207 | spectra_subsetting
⠇ | 2209 | spectra_subsetting
⠋ | 2211 | spectra_subsetting
⠹ | 2213 | spectra_subsetting
⠼ | 2215 | spectra_subsetting
⠦ | 2217 | spectra_subsetting
⠇ | 2219 | spectra_subsetting
⠋ | 2221 | spectra_subsetting
⠹ | 2223 | spectra_subsetting
⠼ | 2225 | spectra_subsetting
⠦ | 2227 | spectra_subsetting
⠇ | 2229 | spectra_subsetting
⠋ | 2231 | spectra_subsetting
⠹ | 2233 | spectra_subsetting
⠼ | 2235 | spectra_subsetting
⠦ | 2237 | spectra_subsetting
⠇ | 2239 | spectra_subsetting
⠋ | 2241 | spectra_subsetting
⠹ | 2243 | spectra_subsetting
⠼ | 2245 | spectra_subsetting
⠦ | 2247 | spectra_subsetting
⠇ | 2249 | spectra_subsetting
⠋ | 2251 | spectra_subsetting
⠹ | 2253 | spectra_subsetting
⠼ | 2255 | spectra_subsetting
⠦ | 2257 | spectra_subsetting
⠇ | 2259 | spectra_subsetting
⠋ | 2261 | spectra_subsetting
⠹ | 2263 | spectra_subsetting
⠼ | 2265 | spectra_subsetting
⠦ | 2267 | spectra_subsetting
⠇ | 2269 | spectra_subsetting
⠋ | 2271 | spectra_subsetting
⠹ | 2273 | spectra_subsetting
⠼ | 2275 | spectra_subsetting
⠦ | 2277 | spectra_subsetting
⠇ | 2279 | spectra_subsetting
⠋ | 2281 | spectra_subsetting
⠹ | 2283 | spectra_subsetting
⠼ | 2285 | spectra_subsetting
⠦ | 2287 | spectra_subsetting
⠇ | 2289 | spectra_subsetting
⠋ | 2291 | spectra_subsetting
⠹ | 2293 | spectra_subsetting
⠼ | 2295 | spectra_subsetting
⠦ | 2297 | spectra_subsetting
⠇ | 2299 | spectra_subsetting
⠙ | 2302 | spectra_subsetting
⠸ | 2304 | spectra_subsetting
⠼ | 2305 | spectra_subsetting
⠙ | 2312 | spectra_subsetting
⠦ | 2317 | spectra_subsetting
✔ | 2317 | spectra_subsetting [66.7s]
⠏ | 0 | spectra_variables
⠙ | 12 | spectra_variables
⠸ | 14 | spectra_variables
⠴ | 16 | spectra_variables
⠸ | 34 | spectra_variables
⠹ | 43 | spectra_variables
⠸ | 54 | spectra_variables
✔ | 1 62 | spectra_variables [10.4s]
══ Results ═════════════════════════════════════════════════════════════════════
Duration: 82.0 s
── Skipped tests (1) ───────────────────────────────────────────────────────────
• empty test (1): 'test_spectra_variables.R:262:1'
[ FAIL 0 | WARN 0 | SKIP 1 | PASS 2383 ]
>
> proc.time()
user system elapsed
116.127 6.949 121.021
MsBackendRawFileReader.Rcheck/MsBackendRawFileReader-Ex.timings
| name | user | system | elapsed | |
| MsBackendRawFileReader-class | 4.184 | 0.634 | 4.753 | |
| MsBackendRawFileReader | 6.096 | 1.228 | 6.701 | |
| hidden_aliases | 2.885 | 0.521 | 3.130 | |
| ioBenchmark | 40.386 | 4.329 | 18.496 | |