Back to Multiple platform build/check report for BioC 3.20: simplified long |
|
This page was generated on 2024-07-16 11:45 -0400 (Tue, 16 Jul 2024).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4677 |
palomino6 | Windows Server 2022 Datacenter | x64 | 4.4.1 (2024-06-14 ucrt) -- "Race for Your Life" | 4416 |
lconway | macOS 12.7.1 Monterey | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4444 |
kjohnson3 | macOS 13.6.5 Ventura | arm64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4393 |
palomino8 | Windows Server 2022 Datacenter | x64 | 4.4.1 (2024-06-14 ucrt) -- "Race for Your Life" | 4373 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
Package 963/2243 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
HPiP 1.11.0 (landing page) Matineh Rahmatbakhsh
| nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | OK | OK | ![]() | ||||||||
palomino6 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | |||||||||
lconway | macOS 12.7.1 Monterey / x86_64 | OK | OK | OK | OK | ![]() | ||||||||
kjohnson3 | macOS 13.6.5 Ventura / arm64 | OK | OK | OK | OK | ![]() | ||||||||
palomino8 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | |||||||||
To the developers/maintainers of the HPiP package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/HPiP.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
Package: HPiP |
Version: 1.11.0 |
Command: F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD check --no-multiarch --install=check:HPiP.install-out.txt --library=F:\biocbuild\bbs-3.20-bioc\R\library --no-vignettes --timings HPiP_1.11.0.tar.gz |
StartedAt: 2024-07-16 01:15:22 -0400 (Tue, 16 Jul 2024) |
EndedAt: 2024-07-16 01:20:20 -0400 (Tue, 16 Jul 2024) |
EllapsedTime: 298.9 seconds |
RetCode: 0 |
Status: OK |
CheckDir: HPiP.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD check --no-multiarch --install=check:HPiP.install-out.txt --library=F:\biocbuild\bbs-3.20-bioc\R\library --no-vignettes --timings HPiP_1.11.0.tar.gz ### ############################################################################## ############################################################################## * using log directory 'F:/biocbuild/bbs-3.20-bioc/meat/HPiP.Rcheck' * using R version 4.4.1 (2024-06-14 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 13.2.0 GNU Fortran (GCC) 13.2.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * using option '--no-vignettes' * checking for file 'HPiP/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'HPiP' version '1.11.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'HPiP' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... NOTE License stub is invalid DCF. * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... NOTE checkRd: (-1) getHPI.Rd:29: Lost braces 29 | then the Kronecker product is the code{(pm × qn)} block matrix | ^ * checking Rd metadata ... OK * checking Rd cross-references ... NOTE Package unavailable to check Rd xrefs: 'ftrCOOL' * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking R/sysdata.rda ... OK * checking files in 'vignettes' ... OK * checking examples ... OK Examples with CPU (user + system) or elapsed time > 5s user system elapsed var_imp 35.79 1.23 37.02 FSmethod 34.46 2.23 36.74 corr_plot 33.67 1.47 35.17 pred_ensembel 15.04 0.41 11.23 enrichfindP 0.63 0.16 12.97 * checking for unstated dependencies in 'tests' ... OK * checking tests ... Running 'runTests.R' OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking running R code from vignettes ... SKIPPED * checking re-building of vignette outputs ... SKIPPED * checking PDF version of manual ... OK * DONE Status: 3 NOTEs See 'F:/biocbuild/bbs-3.20-bioc/meat/HPiP.Rcheck/00check.log' for details.
HPiP.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD INSTALL HPiP ### ############################################################################## ############################################################################## * installing to library 'F:/biocbuild/bbs-3.20-bioc/R/library' * installing *source* package 'HPiP' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (HPiP)
HPiP.Rcheck/tests/runTests.Rout
R version 4.4.1 (2024-06-14 ucrt) -- "Race for Your Life" Copyright (C) 2024 The R Foundation for Statistical Computing Platform: x86_64-w64-mingw32/x64 R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > BiocGenerics:::testPackage('HPiP') No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE avNNet Loading required package: ggplot2 Loading required package: lattice Fitting Repeat 1 # weights: 103 initial value 99.724654 final value 94.052910 converged Fitting Repeat 2 # weights: 103 initial value 95.380866 final value 94.052910 converged Fitting Repeat 3 # weights: 103 initial value 102.204617 final value 94.052910 converged Fitting Repeat 4 # weights: 103 initial value 99.664541 final value 94.052910 converged Fitting Repeat 5 # weights: 103 initial value 95.105260 final value 94.052910 converged Fitting Repeat 1 # weights: 305 initial value 107.604821 final value 94.052910 converged Fitting Repeat 2 # weights: 305 initial value 101.682787 final value 94.052910 converged Fitting Repeat 3 # weights: 305 initial value 104.735701 final value 94.052910 converged Fitting Repeat 4 # weights: 305 initial value 97.376533 final value 93.836066 converged Fitting Repeat 5 # weights: 305 initial value 96.041669 final value 94.052910 converged Fitting Repeat 1 # weights: 507 initial value 104.608226 iter 10 value 93.089856 final value 93.086891 converged Fitting Repeat 2 # weights: 507 initial value 104.295893 final value 94.052910 converged Fitting Repeat 3 # weights: 507 initial value 95.287255 iter 10 value 88.826343 iter 20 value 88.789954 final value 88.789943 converged Fitting Repeat 4 # weights: 507 initial value 100.156543 iter 10 value 93.378741 iter 20 value 93.014066 final value 93.014053 converged Fitting Repeat 5 # weights: 507 initial value 114.031235 final value 94.052910 converged Fitting Repeat 1 # weights: 103 initial value 100.406820 iter 10 value 91.945640 iter 20 value 86.479846 iter 30 value 86.085964 iter 40 value 85.809235 iter 50 value 82.890731 iter 60 value 81.722317 iter 70 value 81.705316 iter 80 value 81.688427 iter 90 value 81.590938 iter 100 value 81.545079 final value 81.545079 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 100.720875 iter 10 value 94.045037 iter 20 value 93.449916 iter 30 value 93.327593 iter 40 value 93.248405 iter 50 value 90.658407 iter 60 value 88.993882 iter 70 value 87.257831 iter 80 value 86.822436 iter 90 value 86.633265 iter 100 value 86.614585 final value 86.614585 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 104.946496 iter 10 value 93.821539 iter 20 value 87.617955 iter 30 value 86.172798 iter 40 value 83.636336 iter 50 value 82.603505 iter 60 value 81.701631 final value 81.691902 converged Fitting Repeat 4 # weights: 103 initial value 97.196754 iter 10 value 92.526754 iter 20 value 89.205933 iter 30 value 86.259458 iter 40 value 86.029987 iter 50 value 85.856589 iter 60 value 85.816275 final value 85.816255 converged Fitting Repeat 5 # weights: 103 initial value 97.804455 iter 10 value 90.867210 iter 20 value 87.206651 iter 30 value 86.967155 iter 40 value 86.211728 iter 50 value 85.919792 iter 60 value 85.831202 iter 70 value 85.816539 final value 85.816255 converged Fitting Repeat 1 # weights: 305 initial value 109.434172 iter 10 value 94.059226 iter 20 value 89.040545 iter 30 value 88.782126 iter 40 value 86.965124 iter 50 value 82.954101 iter 60 value 82.327283 iter 70 value 81.938319 iter 80 value 81.765283 iter 90 value 81.678480 iter 100 value 81.424784 final value 81.424784 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 106.653177 iter 10 value 94.054451 iter 20 value 92.333870 iter 30 value 86.137479 iter 40 value 83.672060 iter 50 value 82.110936 iter 60 value 81.309947 iter 70 value 80.693321 iter 80 value 80.286345 iter 90 value 79.894101 iter 100 value 79.793486 final value 79.793486 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 102.919851 iter 10 value 93.849124 iter 20 value 89.842578 iter 30 value 89.459642 iter 40 value 85.125795 iter 50 value 83.982403 iter 60 value 83.661441 iter 70 value 82.963281 iter 80 value 82.717371 iter 90 value 82.633953 iter 100 value 82.416184 final value 82.416184 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 104.256629 iter 10 value 94.890159 iter 20 value 92.794687 iter 30 value 91.235081 iter 40 value 90.754264 iter 50 value 89.088653 iter 60 value 85.066136 iter 70 value 82.664858 iter 80 value 82.217184 iter 90 value 81.936635 iter 100 value 81.486552 final value 81.486552 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 106.115997 iter 10 value 94.118646 iter 20 value 93.452525 iter 30 value 87.619222 iter 40 value 84.903314 iter 50 value 84.250110 iter 60 value 83.928305 iter 70 value 82.668171 iter 80 value 81.843195 iter 90 value 81.476800 iter 100 value 81.086048 final value 81.086048 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 109.190681 iter 10 value 94.023900 iter 20 value 89.797942 iter 30 value 89.245725 iter 40 value 88.531525 iter 50 value 87.948697 iter 60 value 86.738578 iter 70 value 85.125927 iter 80 value 82.777149 iter 90 value 82.493823 iter 100 value 82.373647 final value 82.373647 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 145.783157 iter 10 value 96.492850 iter 20 value 94.068836 iter 30 value 92.928226 iter 40 value 87.116460 iter 50 value 86.444807 iter 60 value 84.220170 iter 70 value 82.468470 iter 80 value 81.242146 iter 90 value 80.750647 iter 100 value 80.531632 final value 80.531632 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 103.746790 iter 10 value 94.071939 iter 20 value 93.091453 iter 30 value 89.131034 iter 40 value 85.621542 iter 50 value 82.663902 iter 60 value 81.445953 iter 70 value 80.455998 iter 80 value 80.308061 iter 90 value 80.180045 iter 100 value 80.011277 final value 80.011277 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 123.879590 iter 10 value 94.466738 iter 20 value 93.582231 iter 30 value 91.368298 iter 40 value 84.359643 iter 50 value 82.489920 iter 60 value 81.667385 iter 70 value 81.170199 iter 80 value 80.687296 iter 90 value 80.475754 iter 100 value 80.427875 final value 80.427875 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 105.821005 iter 10 value 94.050366 iter 20 value 91.918766 iter 30 value 89.221195 iter 40 value 87.350234 iter 50 value 86.085263 iter 60 value 85.632641 iter 70 value 83.952291 iter 80 value 83.336605 iter 90 value 83.276672 iter 100 value 82.703414 final value 82.703414 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 98.753750 iter 10 value 94.054186 iter 20 value 94.050536 iter 30 value 93.201354 iter 40 value 93.144699 final value 93.144503 converged Fitting Repeat 2 # weights: 103 initial value 97.686660 iter 10 value 94.054535 iter 20 value 94.052927 iter 30 value 92.902234 final value 86.379033 converged Fitting Repeat 3 # weights: 103 initial value 105.547951 final value 94.054578 converged Fitting Repeat 4 # weights: 103 initial value 97.848670 final value 94.054713 converged Fitting Repeat 5 # weights: 103 initial value 102.097141 final value 94.054112 converged Fitting Repeat 1 # weights: 305 initial value 98.194274 iter 10 value 94.057864 iter 20 value 90.873089 iter 30 value 87.785830 iter 40 value 86.203799 iter 50 value 86.195693 iter 60 value 86.192536 final value 86.192491 converged Fitting Repeat 2 # weights: 305 initial value 109.549521 iter 10 value 94.045080 iter 20 value 93.840602 iter 30 value 93.836541 iter 40 value 93.832603 iter 50 value 93.729795 iter 60 value 92.274365 iter 70 value 89.253301 iter 80 value 87.587843 final value 87.587580 converged Fitting Repeat 3 # weights: 305 initial value 99.688623 iter 10 value 93.841749 iter 20 value 93.650004 iter 30 value 91.230899 iter 40 value 87.630194 final value 87.613123 converged Fitting Repeat 4 # weights: 305 initial value 99.545395 iter 10 value 92.497190 iter 20 value 90.021907 iter 30 value 84.517626 iter 40 value 83.906371 iter 50 value 83.904584 iter 50 value 83.904584 final value 83.904584 converged Fitting Repeat 5 # weights: 305 initial value 98.698155 iter 10 value 94.016027 iter 20 value 93.361218 iter 30 value 90.971012 iter 40 value 89.472122 iter 50 value 88.791935 final value 88.791573 converged Fitting Repeat 1 # weights: 507 initial value 99.278978 iter 10 value 93.134437 iter 20 value 93.131992 iter 30 value 93.125582 iter 40 value 93.075613 iter 50 value 92.876622 iter 60 value 92.837301 final value 92.837277 converged Fitting Repeat 2 # weights: 507 initial value 94.909576 iter 10 value 92.962823 iter 20 value 92.870087 iter 30 value 92.865479 iter 40 value 92.859707 iter 50 value 92.745053 iter 60 value 92.739271 iter 70 value 92.727607 iter 80 value 92.687269 iter 90 value 92.674547 iter 100 value 92.662891 final value 92.662891 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 100.241160 iter 10 value 93.843605 iter 20 value 93.837187 iter 30 value 93.394933 iter 40 value 87.383988 iter 50 value 82.414503 iter 60 value 80.838240 iter 70 value 79.927302 iter 80 value 79.876690 iter 90 value 79.876309 iter 90 value 79.876308 iter 90 value 79.876308 final value 79.876308 converged Fitting Repeat 4 # weights: 507 initial value 106.891827 iter 10 value 94.060476 iter 20 value 94.052934 iter 30 value 86.322877 iter 40 value 86.189419 iter 40 value 86.189418 final value 86.189418 converged Fitting Repeat 5 # weights: 507 initial value 119.105043 iter 10 value 93.844672 iter 20 value 93.774111 iter 30 value 89.349547 iter 40 value 87.293664 iter 50 value 85.210045 iter 60 value 84.802721 iter 70 value 84.748616 iter 80 value 84.242175 iter 90 value 83.988856 iter 100 value 83.925117 final value 83.925117 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 96.337020 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 96.164338 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 104.477147 final value 94.466823 converged Fitting Repeat 4 # weights: 103 initial value 101.877648 final value 94.466823 converged Fitting Repeat 5 # weights: 103 initial value 97.627112 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 94.976217 final value 94.484211 converged Fitting Repeat 2 # weights: 305 initial value 114.073671 final value 94.484211 converged Fitting Repeat 3 # weights: 305 initial value 101.727058 final value 94.484211 converged Fitting Repeat 4 # weights: 305 initial value 108.527067 final value 94.484211 converged Fitting Repeat 5 # weights: 305 initial value 95.044070 final value 94.484211 converged Fitting Repeat 1 # weights: 507 initial value 99.123323 final value 94.466823 converged Fitting Repeat 2 # weights: 507 initial value 99.457994 final value 94.466823 converged Fitting Repeat 3 # weights: 507 initial value 116.427571 final value 94.484211 converged Fitting Repeat 4 # weights: 507 initial value 109.234617 iter 10 value 94.309803 iter 10 value 94.309803 iter 10 value 94.309803 final value 94.309803 converged Fitting Repeat 5 # weights: 507 initial value 107.293272 final value 94.484210 converged Fitting Repeat 1 # weights: 103 initial value 96.778958 iter 10 value 94.567286 iter 20 value 94.422629 iter 30 value 88.474061 iter 40 value 86.724301 iter 50 value 85.080576 iter 60 value 84.644111 iter 70 value 84.570601 iter 80 value 84.532841 final value 84.528277 converged Fitting Repeat 2 # weights: 103 initial value 105.370517 iter 10 value 94.477858 iter 20 value 88.797703 iter 30 value 86.364193 iter 40 value 86.023791 iter 50 value 84.089308 iter 60 value 83.520444 iter 70 value 83.407348 iter 80 value 83.302681 final value 83.300729 converged Fitting Repeat 3 # weights: 103 initial value 104.575064 iter 10 value 94.280624 iter 20 value 91.349918 iter 30 value 91.055443 iter 40 value 88.674840 iter 50 value 86.564024 iter 60 value 85.348329 iter 70 value 84.285955 iter 80 value 83.692146 iter 90 value 83.623728 iter 100 value 83.598176 final value 83.598176 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 104.006358 iter 10 value 94.490559 iter 20 value 94.458206 iter 30 value 94.066000 iter 40 value 92.753907 iter 50 value 92.696202 iter 60 value 92.686193 iter 70 value 92.685312 iter 80 value 92.684092 iter 90 value 92.683915 final value 92.683888 converged Fitting Repeat 5 # weights: 103 initial value 110.704590 iter 10 value 94.493603 iter 20 value 94.486408 iter 30 value 93.099644 iter 40 value 91.738774 iter 50 value 91.607039 iter 60 value 90.553360 iter 70 value 86.791654 iter 80 value 85.838894 iter 90 value 84.198892 iter 100 value 83.631793 final value 83.631793 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 103.950730 iter 10 value 94.667144 iter 20 value 94.491651 iter 30 value 93.880851 iter 40 value 88.463648 iter 50 value 86.415563 iter 60 value 85.746694 iter 70 value 85.302197 iter 80 value 84.459691 iter 90 value 82.829322 iter 100 value 81.793590 final value 81.793590 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 105.250664 iter 10 value 94.497491 iter 20 value 94.426686 iter 30 value 90.413392 iter 40 value 87.214726 iter 50 value 83.666361 iter 60 value 82.708393 iter 70 value 82.473369 iter 80 value 82.187803 iter 90 value 82.122601 iter 100 value 82.035608 final value 82.035608 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 106.854987 iter 10 value 94.567159 iter 20 value 93.139605 iter 30 value 88.131133 iter 40 value 84.775428 iter 50 value 83.464480 iter 60 value 83.111138 iter 70 value 82.881485 iter 80 value 82.341994 iter 90 value 81.992839 iter 100 value 81.928132 final value 81.928132 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 101.725625 iter 10 value 94.475404 iter 20 value 90.267130 iter 30 value 87.784113 iter 40 value 87.475362 iter 50 value 87.367701 iter 60 value 87.106627 iter 70 value 86.310455 iter 80 value 85.079065 iter 90 value 83.592880 iter 100 value 83.473363 final value 83.473363 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 103.316215 iter 10 value 94.780142 iter 20 value 92.319821 iter 30 value 86.580140 iter 40 value 84.034627 iter 50 value 83.634173 iter 60 value 83.291477 iter 70 value 82.841943 iter 80 value 82.418387 iter 90 value 81.848769 iter 100 value 81.663582 final value 81.663582 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 103.701104 iter 10 value 94.415811 iter 20 value 86.786235 iter 30 value 86.107265 iter 40 value 84.918445 iter 50 value 84.119180 iter 60 value 83.218629 iter 70 value 82.607346 iter 80 value 82.073528 iter 90 value 81.921168 iter 100 value 81.878244 final value 81.878244 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 113.500114 iter 10 value 94.678848 iter 20 value 94.509867 iter 30 value 94.128474 iter 40 value 92.339022 iter 50 value 88.836737 iter 60 value 87.840231 iter 70 value 84.727041 iter 80 value 83.742596 iter 90 value 83.004567 iter 100 value 82.667080 final value 82.667080 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 105.900239 iter 10 value 94.557592 iter 20 value 94.205567 iter 30 value 88.077958 iter 40 value 86.398904 iter 50 value 84.192081 iter 60 value 83.948949 iter 70 value 83.803190 iter 80 value 83.357072 iter 90 value 83.123627 iter 100 value 83.054733 final value 83.054733 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 149.076952 iter 10 value 94.488803 iter 20 value 90.067326 iter 30 value 88.052614 iter 40 value 84.847681 iter 50 value 84.462277 iter 60 value 83.195355 iter 70 value 82.656562 iter 80 value 82.410657 iter 90 value 82.284440 iter 100 value 82.059740 final value 82.059740 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 120.199388 iter 10 value 94.374406 iter 20 value 86.717923 iter 30 value 84.811390 iter 40 value 83.205019 iter 50 value 83.124051 iter 60 value 83.082946 iter 70 value 83.015208 iter 80 value 82.837019 iter 90 value 82.655745 iter 100 value 82.091631 final value 82.091631 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 95.699148 iter 10 value 94.468549 iter 20 value 94.467757 final value 94.466885 converged Fitting Repeat 2 # weights: 103 initial value 96.590307 iter 10 value 94.486050 iter 20 value 94.484254 final value 94.484208 converged Fitting Repeat 3 # weights: 103 initial value 107.352530 final value 94.485586 converged Fitting Repeat 4 # weights: 103 initial value 95.281235 final value 94.485705 converged Fitting Repeat 5 # weights: 103 initial value 96.687610 final value 94.430635 converged Fitting Repeat 1 # weights: 305 initial value 119.930021 iter 10 value 94.489977 iter 20 value 94.484903 iter 30 value 89.797892 iter 40 value 83.923401 iter 50 value 83.921084 iter 60 value 83.535748 iter 70 value 83.464494 iter 80 value 83.451365 iter 90 value 83.444233 iter 100 value 83.425447 final value 83.425447 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 96.675145 iter 10 value 94.430807 iter 20 value 94.314431 iter 30 value 94.311089 iter 40 value 94.257112 iter 50 value 91.289752 iter 60 value 86.922844 final value 86.922713 converged Fitting Repeat 3 # weights: 305 initial value 113.468674 iter 10 value 94.433610 iter 20 value 94.420618 final value 94.408677 converged Fitting Repeat 4 # weights: 305 initial value 95.639360 iter 10 value 94.489150 iter 20 value 94.484252 iter 30 value 92.907818 iter 40 value 89.210947 iter 50 value 84.394539 iter 60 value 84.203230 iter 70 value 84.149495 iter 80 value 83.926212 iter 90 value 83.101383 iter 100 value 83.097392 final value 83.097392 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 102.336303 iter 10 value 94.471299 iter 20 value 94.467001 iter 30 value 93.174827 iter 40 value 86.984606 iter 50 value 85.118687 iter 60 value 85.041877 iter 70 value 85.041208 iter 70 value 85.041207 iter 70 value 85.041207 final value 85.041207 converged Fitting Repeat 1 # weights: 507 initial value 101.231066 iter 10 value 94.492161 iter 20 value 94.484320 iter 30 value 94.089325 iter 40 value 92.287864 iter 50 value 92.286485 iter 60 value 86.945576 iter 70 value 86.882641 iter 80 value 86.327845 iter 90 value 83.571246 iter 100 value 82.176775 final value 82.176775 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 101.819313 iter 10 value 94.474903 iter 20 value 94.467774 iter 30 value 94.075194 iter 40 value 87.316195 iter 50 value 84.333122 iter 60 value 81.990221 iter 70 value 81.136078 iter 80 value 80.856071 iter 90 value 80.710255 iter 100 value 80.541665 final value 80.541665 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 96.288196 iter 10 value 94.475201 iter 20 value 94.103219 iter 30 value 84.177489 iter 40 value 81.648913 iter 50 value 81.269757 iter 60 value 81.001919 iter 70 value 80.978578 iter 80 value 80.978062 final value 80.977420 converged Fitting Repeat 4 # weights: 507 initial value 115.070137 iter 10 value 94.361617 iter 20 value 87.994272 iter 30 value 86.962342 iter 40 value 86.960138 iter 50 value 85.646335 iter 60 value 83.404155 iter 70 value 83.390353 iter 80 value 83.390118 iter 90 value 83.372117 iter 100 value 83.314287 final value 83.314287 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 98.024073 iter 10 value 94.489961 iter 20 value 92.802385 iter 30 value 88.034594 iter 40 value 87.472538 iter 50 value 87.435979 iter 60 value 82.603443 iter 70 value 82.603112 iter 80 value 82.528279 iter 90 value 82.515638 iter 100 value 82.478188 final value 82.478188 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 99.299043 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 97.332998 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 108.772327 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 101.730529 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 99.254209 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 95.690558 iter 10 value 94.127833 iter 20 value 94.127413 final value 94.127406 converged Fitting Repeat 2 # weights: 305 initial value 96.850185 final value 94.466823 converged Fitting Repeat 3 # weights: 305 initial value 102.101053 final value 94.484211 converged Fitting Repeat 4 # weights: 305 initial value 107.349456 final value 94.466823 converged Fitting Repeat 5 # weights: 305 initial value 98.000935 final value 94.484211 converged Fitting Repeat 1 # weights: 507 initial value 122.185484 final value 94.484211 converged Fitting Repeat 2 # weights: 507 initial value 95.483113 final value 94.385584 converged Fitting Repeat 3 # weights: 507 initial value 100.463379 final value 94.484211 converged Fitting Repeat 4 # weights: 507 initial value 108.407905 final value 94.484210 converged Fitting Repeat 5 # weights: 507 initial value 112.035177 iter 10 value 89.551684 iter 20 value 87.593475 iter 30 value 87.198816 iter 40 value 87.151044 final value 87.150501 converged Fitting Repeat 1 # weights: 103 initial value 99.537432 iter 10 value 86.196776 iter 20 value 84.628832 iter 30 value 84.571155 iter 40 value 84.541322 final value 84.540269 converged Fitting Repeat 2 # weights: 103 initial value 97.113097 iter 10 value 94.321472 iter 20 value 90.491343 iter 30 value 88.430482 iter 40 value 87.501761 iter 50 value 86.748234 iter 60 value 84.899227 iter 70 value 84.855542 iter 80 value 84.813330 iter 90 value 84.809878 iter 100 value 84.743224 final value 84.743224 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 97.556463 iter 10 value 93.573204 iter 20 value 86.550889 iter 30 value 85.774824 iter 40 value 85.726097 iter 50 value 84.701017 iter 60 value 84.686262 iter 70 value 84.676170 final value 84.675478 converged Fitting Repeat 4 # weights: 103 initial value 99.712065 iter 10 value 94.430924 iter 20 value 86.342363 iter 30 value 85.384609 iter 40 value 84.737925 iter 50 value 84.731843 iter 60 value 84.718369 iter 70 value 84.692701 iter 80 value 84.686562 iter 90 value 84.675507 final value 84.675478 converged Fitting Repeat 5 # weights: 103 initial value 98.472826 iter 10 value 88.691110 iter 20 value 85.148398 iter 30 value 84.840637 iter 40 value 84.812683 final value 84.809918 converged Fitting Repeat 1 # weights: 305 initial value 108.723687 iter 10 value 93.665374 iter 20 value 87.529271 iter 30 value 86.726796 iter 40 value 86.364549 iter 50 value 84.352699 iter 60 value 82.919603 iter 70 value 82.477825 iter 80 value 81.662294 iter 90 value 81.186646 iter 100 value 80.957624 final value 80.957624 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 100.005174 iter 10 value 94.347167 iter 20 value 92.472188 iter 30 value 91.195153 iter 40 value 91.099488 iter 50 value 90.939751 iter 60 value 83.913717 iter 70 value 83.574284 iter 80 value 83.492135 iter 90 value 83.442680 iter 100 value 82.988497 final value 82.988497 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 117.898625 iter 10 value 94.385677 iter 20 value 90.758132 iter 30 value 86.760291 iter 40 value 85.275740 iter 50 value 84.460623 iter 60 value 84.260576 iter 70 value 84.062826 iter 80 value 84.024195 iter 90 value 83.977985 iter 100 value 82.345654 final value 82.345654 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 105.700662 iter 10 value 93.231789 iter 20 value 86.177309 iter 30 value 84.684018 iter 40 value 84.507104 iter 50 value 84.467406 iter 60 value 84.364707 iter 70 value 84.060250 iter 80 value 83.216873 iter 90 value 82.217113 iter 100 value 82.125188 final value 82.125188 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 110.654713 iter 10 value 94.326780 iter 20 value 86.788444 iter 30 value 84.819558 iter 40 value 82.972050 iter 50 value 82.517375 iter 60 value 81.665944 iter 70 value 81.235769 iter 80 value 81.158475 iter 90 value 81.045100 iter 100 value 81.006993 final value 81.006993 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 124.839344 iter 10 value 95.614296 iter 20 value 93.756302 iter 30 value 86.091574 iter 40 value 85.342363 iter 50 value 85.214788 iter 60 value 83.924108 iter 70 value 83.499614 iter 80 value 83.268552 iter 90 value 82.768861 iter 100 value 81.987640 final value 81.987640 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 119.177195 iter 10 value 94.554988 iter 20 value 93.745493 iter 30 value 87.046024 iter 40 value 84.911114 iter 50 value 83.853781 iter 60 value 83.020835 iter 70 value 82.238435 iter 80 value 82.147029 iter 90 value 81.591958 iter 100 value 81.212068 final value 81.212068 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 109.430718 iter 10 value 94.524901 iter 20 value 93.670987 iter 30 value 87.361964 iter 40 value 85.003993 iter 50 value 83.626485 iter 60 value 83.180530 iter 70 value 82.866418 iter 80 value 81.995568 iter 90 value 81.959191 iter 100 value 81.917731 final value 81.917731 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 116.911546 iter 10 value 99.699985 iter 20 value 93.378630 iter 30 value 86.028852 iter 40 value 84.988619 iter 50 value 83.493903 iter 60 value 82.416129 iter 70 value 82.315528 iter 80 value 81.939931 iter 90 value 81.475700 iter 100 value 80.946704 final value 80.946704 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 113.698568 iter 10 value 95.140794 iter 20 value 94.427231 iter 30 value 93.783002 iter 40 value 84.979816 iter 50 value 84.266218 iter 60 value 82.974543 iter 70 value 82.459212 iter 80 value 81.217823 iter 90 value 80.777531 iter 100 value 80.521386 final value 80.521386 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 113.732254 iter 10 value 94.485771 iter 20 value 94.484145 iter 30 value 93.880306 iter 40 value 93.871686 final value 93.871658 converged Fitting Repeat 2 # weights: 103 initial value 106.057850 iter 10 value 94.485934 iter 20 value 94.437057 final value 94.165221 converged Fitting Repeat 3 # weights: 103 initial value 104.438765 iter 10 value 94.242251 iter 20 value 93.785378 final value 93.784664 converged Fitting Repeat 4 # weights: 103 initial value 95.288255 iter 10 value 94.485936 iter 20 value 94.484220 final value 94.484218 converged Fitting Repeat 5 # weights: 103 initial value 96.877340 final value 94.485819 converged Fitting Repeat 1 # weights: 305 initial value 103.137966 iter 10 value 94.488963 iter 20 value 94.484235 iter 30 value 92.949439 iter 40 value 85.460350 iter 50 value 85.456374 iter 60 value 85.372460 final value 85.369375 converged Fitting Repeat 2 # weights: 305 initial value 105.566394 iter 10 value 94.488632 iter 20 value 94.379665 iter 30 value 85.069652 iter 40 value 85.029054 iter 50 value 85.027173 iter 60 value 84.993873 iter 70 value 84.848190 iter 80 value 83.266905 iter 90 value 83.209436 iter 100 value 81.371315 final value 81.371315 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 104.112981 iter 10 value 94.488481 iter 20 value 94.157273 iter 30 value 91.819842 iter 40 value 91.807472 iter 50 value 91.536683 iter 60 value 91.534714 final value 91.534698 converged Fitting Repeat 4 # weights: 305 initial value 109.948974 iter 10 value 94.471592 iter 20 value 94.467253 iter 30 value 87.753309 iter 40 value 85.824023 final value 85.818736 converged Fitting Repeat 5 # weights: 305 initial value 106.870821 iter 10 value 94.488381 iter 20 value 94.295737 iter 30 value 85.947926 iter 40 value 84.377471 iter 50 value 84.336077 iter 60 value 84.151374 iter 70 value 84.115457 iter 80 value 84.114684 final value 84.114594 converged Fitting Repeat 1 # weights: 507 initial value 116.709568 iter 10 value 93.252200 iter 20 value 92.592540 iter 30 value 92.463622 iter 40 value 92.460922 iter 50 value 92.455546 iter 60 value 91.722933 iter 70 value 90.705254 iter 80 value 90.515506 iter 90 value 86.758881 iter 100 value 83.863919 final value 83.863919 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 99.838201 iter 10 value 94.440677 iter 20 value 83.531819 iter 30 value 83.484415 iter 40 value 83.416950 iter 50 value 83.415488 iter 60 value 82.890835 iter 70 value 82.869881 iter 80 value 82.861986 iter 90 value 81.708751 iter 100 value 81.468404 final value 81.468404 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 99.052318 iter 10 value 90.066876 iter 20 value 86.940125 iter 30 value 86.937778 iter 40 value 86.886540 iter 50 value 85.344959 iter 60 value 83.181682 iter 70 value 80.901321 iter 80 value 79.747314 iter 90 value 79.419900 iter 100 value 79.369145 final value 79.369145 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 96.055520 iter 10 value 93.497284 iter 20 value 93.301372 iter 30 value 86.735842 iter 40 value 86.309771 iter 50 value 86.307866 iter 60 value 86.307515 iter 70 value 86.306746 iter 80 value 86.234767 iter 90 value 85.533107 iter 100 value 85.280847 final value 85.280847 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 103.103858 iter 10 value 94.046687 iter 20 value 93.378743 iter 30 value 93.375845 iter 40 value 93.359909 iter 50 value 93.354278 iter 60 value 82.399283 iter 70 value 82.052285 iter 80 value 82.032548 iter 90 value 81.737645 iter 100 value 81.633446 final value 81.633446 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 97.520897 final value 94.052910 converged Fitting Repeat 2 # weights: 103 initial value 100.391903 iter 10 value 93.893485 iter 20 value 92.102594 iter 30 value 92.023308 iter 40 value 92.011665 iter 50 value 92.010251 final value 92.010247 converged Fitting Repeat 3 # weights: 103 initial value 93.306050 iter 10 value 84.765664 iter 20 value 84.100097 iter 30 value 82.863727 iter 40 value 82.850992 final value 82.850989 converged Fitting Repeat 4 # weights: 103 initial value 94.624962 iter 10 value 87.634464 iter 20 value 87.441561 iter 30 value 87.439484 final value 87.439474 converged Fitting Repeat 5 # weights: 103 initial value 96.388930 iter 10 value 94.052870 iter 10 value 94.052870 iter 20 value 93.328265 final value 93.328261 converged Fitting Repeat 1 # weights: 305 initial value 106.134251 final value 93.628453 converged Fitting Repeat 2 # weights: 305 initial value 99.936177 final value 93.328261 converged Fitting Repeat 3 # weights: 305 initial value 103.759325 iter 10 value 93.328381 final value 93.328261 converged Fitting Repeat 4 # weights: 305 initial value 115.534963 final value 94.052910 converged Fitting Repeat 5 # weights: 305 initial value 116.218089 final value 94.052910 converged Fitting Repeat 1 # weights: 507 initial value 94.469050 iter 10 value 87.143591 iter 20 value 83.441297 iter 30 value 83.430763 final value 83.430740 converged Fitting Repeat 2 # weights: 507 initial value 124.493870 final value 94.052910 converged Fitting Repeat 3 # weights: 507 initial value 98.381412 final value 94.052910 converged Fitting Repeat 4 # weights: 507 initial value 119.721757 iter 10 value 94.052911 iter 10 value 94.052910 iter 10 value 94.052910 final value 94.052910 converged Fitting Repeat 5 # weights: 507 initial value 118.875260 final value 94.052910 converged Fitting Repeat 1 # weights: 103 initial value 99.396775 iter 10 value 93.977865 iter 20 value 86.019127 iter 30 value 83.634568 iter 40 value 83.523144 iter 50 value 82.745447 iter 60 value 82.673513 iter 70 value 82.298617 iter 80 value 81.354583 iter 90 value 81.110507 iter 100 value 80.884137 final value 80.884137 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 111.800826 iter 10 value 93.924071 iter 20 value 85.457654 iter 30 value 84.424743 iter 40 value 83.555672 iter 50 value 82.857386 iter 60 value 82.229879 iter 70 value 81.581895 iter 80 value 81.232202 iter 90 value 81.004380 iter 100 value 80.905754 final value 80.905754 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 96.948684 iter 10 value 93.736325 iter 20 value 84.333541 iter 30 value 83.518489 iter 40 value 82.502368 iter 50 value 82.467818 iter 60 value 82.429441 iter 70 value 82.423379 iter 80 value 81.288597 iter 90 value 81.182704 iter 100 value 80.904951 final value 80.904951 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 96.553770 iter 10 value 94.056481 iter 20 value 93.685060 iter 30 value 93.676219 iter 40 value 86.953032 iter 50 value 83.242396 iter 60 value 82.314686 iter 70 value 82.033907 iter 80 value 81.967520 final value 81.962417 converged Fitting Repeat 5 # weights: 103 initial value 113.557204 iter 10 value 93.858331 iter 20 value 89.761739 iter 30 value 88.524934 iter 40 value 85.603536 iter 50 value 83.976003 iter 60 value 83.427324 iter 70 value 81.302133 iter 80 value 80.981611 iter 90 value 80.867368 iter 100 value 80.766979 final value 80.766979 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 98.477468 iter 10 value 88.322102 iter 20 value 84.184985 iter 30 value 82.008265 iter 40 value 81.659933 iter 50 value 81.622784 iter 60 value 81.608499 iter 70 value 81.554149 iter 80 value 81.065477 iter 90 value 80.716763 iter 100 value 80.676815 final value 80.676815 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 115.005368 iter 10 value 91.026865 iter 20 value 84.706603 iter 30 value 83.999552 iter 40 value 82.027567 iter 50 value 81.424948 iter 60 value 81.163062 iter 70 value 80.979891 iter 80 value 80.419827 iter 90 value 80.137851 iter 100 value 79.766132 final value 79.766132 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 99.587267 iter 10 value 94.327422 iter 20 value 84.982843 iter 30 value 84.324680 iter 40 value 83.335200 iter 50 value 83.185040 iter 60 value 82.667835 iter 70 value 81.449353 iter 80 value 80.502603 iter 90 value 79.984523 iter 100 value 79.739940 final value 79.739940 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 117.172274 iter 10 value 93.644105 iter 20 value 86.002326 iter 30 value 82.919926 iter 40 value 82.078562 iter 50 value 80.888715 iter 60 value 80.261455 iter 70 value 79.525946 iter 80 value 79.381465 iter 90 value 79.252409 iter 100 value 79.139285 final value 79.139285 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 127.000742 iter 10 value 94.037071 iter 20 value 89.626465 iter 30 value 85.249320 iter 40 value 83.140111 iter 50 value 82.886183 iter 60 value 81.900705 iter 70 value 80.396738 iter 80 value 79.763220 iter 90 value 79.632040 iter 100 value 79.552338 final value 79.552338 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 110.980192 iter 10 value 94.804996 iter 20 value 86.238735 iter 30 value 83.066475 iter 40 value 82.024748 iter 50 value 81.624653 iter 60 value 80.938723 iter 70 value 80.291048 iter 80 value 80.139146 iter 90 value 79.983743 iter 100 value 79.924527 final value 79.924527 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 115.356526 iter 10 value 94.084854 iter 20 value 93.330782 iter 30 value 86.843418 iter 40 value 84.857917 iter 50 value 83.345073 iter 60 value 82.473619 iter 70 value 81.869297 iter 80 value 81.665604 iter 90 value 80.963550 iter 100 value 80.351579 final value 80.351579 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 107.486776 iter 10 value 95.412025 iter 20 value 93.490765 iter 30 value 84.464828 iter 40 value 82.779623 iter 50 value 82.162307 iter 60 value 81.810337 iter 70 value 81.061940 iter 80 value 80.621919 iter 90 value 80.217030 iter 100 value 79.960224 final value 79.960224 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 108.882981 iter 10 value 93.959058 iter 20 value 93.143247 iter 30 value 88.289084 iter 40 value 85.756176 iter 50 value 84.318351 iter 60 value 83.468256 iter 70 value 82.313759 iter 80 value 81.967235 iter 90 value 81.618842 iter 100 value 80.643833 final value 80.643833 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 103.898944 iter 10 value 94.275818 iter 20 value 85.764380 iter 30 value 83.118262 iter 40 value 83.003306 iter 50 value 82.547601 iter 60 value 81.623944 iter 70 value 81.379772 iter 80 value 81.159999 iter 90 value 80.851171 iter 100 value 80.579510 final value 80.579510 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 110.783649 iter 10 value 94.054715 iter 20 value 94.046572 iter 30 value 89.644636 iter 40 value 85.848049 iter 50 value 85.829469 iter 60 value 85.827490 iter 70 value 85.825647 iter 80 value 85.716464 iter 90 value 85.702093 iter 100 value 85.698755 final value 85.698755 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 94.872911 final value 94.054343 converged Fitting Repeat 3 # weights: 103 initial value 100.578811 iter 10 value 93.889551 iter 20 value 92.843106 iter 30 value 92.840292 iter 40 value 92.572024 iter 50 value 92.556917 final value 92.556913 converged Fitting Repeat 4 # weights: 103 initial value 112.256452 iter 10 value 94.054430 iter 20 value 94.052968 iter 30 value 93.980092 iter 40 value 92.273652 iter 50 value 92.267636 iter 60 value 92.266656 iter 70 value 92.266607 iter 80 value 92.266171 iter 90 value 92.247411 final value 92.246351 converged Fitting Repeat 5 # weights: 103 initial value 99.107198 final value 94.054450 converged Fitting Repeat 1 # weights: 305 initial value 122.269199 iter 10 value 93.333579 iter 20 value 93.327824 iter 30 value 83.219137 iter 40 value 83.070308 final value 83.070045 converged Fitting Repeat 2 # weights: 305 initial value 119.458162 iter 10 value 94.057278 iter 20 value 93.911793 iter 30 value 91.961219 iter 40 value 84.721162 iter 50 value 83.989958 iter 60 value 83.963666 iter 70 value 82.438428 iter 80 value 81.617224 iter 90 value 80.229150 iter 100 value 80.227456 final value 80.227456 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 96.754357 iter 10 value 94.057818 iter 20 value 94.030888 iter 30 value 84.351874 iter 40 value 84.327085 iter 50 value 84.030679 final value 84.030654 converged Fitting Repeat 4 # weights: 305 initial value 96.453139 iter 10 value 94.054889 iter 20 value 93.335947 final value 93.328726 converged Fitting Repeat 5 # weights: 305 initial value 113.454432 iter 10 value 93.333471 iter 20 value 93.284421 final value 93.274241 converged Fitting Repeat 1 # weights: 507 initial value 99.107537 iter 10 value 83.321000 iter 20 value 81.299012 iter 30 value 80.328652 iter 40 value 80.324944 iter 50 value 80.164001 iter 60 value 80.093675 iter 70 value 80.092046 iter 80 value 80.081582 iter 90 value 80.063062 iter 100 value 80.056036 final value 80.056036 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 105.789485 iter 10 value 93.336746 iter 20 value 93.330366 iter 30 value 93.288643 iter 40 value 86.846902 iter 50 value 80.992151 iter 60 value 78.451783 iter 70 value 78.115420 iter 80 value 78.106858 iter 90 value 78.103315 final value 78.103314 converged Fitting Repeat 3 # weights: 507 initial value 110.279595 iter 10 value 94.035500 iter 20 value 84.594031 iter 30 value 82.734902 iter 40 value 82.261085 iter 50 value 82.259246 iter 60 value 82.255479 iter 70 value 81.863483 iter 80 value 81.086178 iter 90 value 81.085042 iter 100 value 80.196462 final value 80.196462 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 96.350607 iter 10 value 94.060422 iter 20 value 93.762503 iter 30 value 89.116040 iter 40 value 87.183434 iter 50 value 87.095718 iter 60 value 85.742561 iter 70 value 85.671946 iter 80 value 85.030705 iter 90 value 84.435062 iter 100 value 84.015788 final value 84.015788 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 109.823661 iter 10 value 87.803063 iter 20 value 83.495752 iter 30 value 83.418490 iter 40 value 83.025091 iter 50 value 83.018851 iter 60 value 83.013362 iter 70 value 83.013051 iter 80 value 82.878980 iter 90 value 82.199361 iter 100 value 81.844192 final value 81.844192 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 105.070555 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 98.174022 final value 94.476471 converged Fitting Repeat 3 # weights: 103 initial value 97.267941 final value 94.466823 converged Fitting Repeat 4 # weights: 103 initial value 103.313473 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 103.250702 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 116.160185 final value 94.484211 converged Fitting Repeat 2 # weights: 305 initial value 104.657592 final value 94.466823 converged Fitting Repeat 3 # weights: 305 initial value 101.381638 final value 94.484211 converged Fitting Repeat 4 # weights: 305 initial value 96.284008 final value 94.428839 converged Fitting Repeat 5 # weights: 305 initial value 101.086262 final value 94.466823 converged Fitting Repeat 1 # weights: 507 initial value 103.871407 iter 10 value 94.466824 iter 10 value 94.466823 iter 10 value 94.466823 final value 94.466823 converged Fitting Repeat 2 # weights: 507 initial value 98.373831 final value 94.129870 converged Fitting Repeat 3 # weights: 507 initial value 116.906542 final value 94.476471 converged Fitting Repeat 4 # weights: 507 initial value 108.276266 final value 94.484211 converged Fitting Repeat 5 # weights: 507 initial value 108.735307 final value 94.466823 converged Fitting Repeat 1 # weights: 103 initial value 105.690514 iter 10 value 94.473164 iter 20 value 92.320265 iter 30 value 86.586339 iter 40 value 84.791821 iter 50 value 83.915728 iter 60 value 81.696585 iter 70 value 81.411030 iter 80 value 81.400810 final value 81.400754 converged Fitting Repeat 2 # weights: 103 initial value 99.848804 iter 10 value 94.488535 iter 20 value 93.923266 iter 30 value 90.155424 iter 40 value 86.228612 iter 50 value 85.649850 iter 60 value 85.283098 iter 70 value 85.144122 iter 80 value 84.871857 iter 90 value 78.566530 iter 100 value 78.354096 final value 78.354096 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 105.077833 iter 10 value 97.165562 iter 20 value 94.315911 iter 30 value 93.730261 iter 40 value 88.818635 iter 50 value 87.711178 iter 60 value 87.496789 iter 70 value 87.448897 iter 80 value 86.281099 iter 90 value 83.378134 iter 100 value 81.195804 final value 81.195804 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 96.880825 iter 10 value 94.463541 iter 20 value 90.811503 iter 30 value 84.308665 iter 40 value 82.751758 iter 50 value 82.177293 iter 60 value 81.634538 iter 70 value 81.533497 iter 80 value 81.412273 iter 90 value 81.400780 final value 81.400753 converged Fitting Repeat 5 # weights: 103 initial value 106.403567 iter 10 value 94.482015 iter 20 value 93.896452 iter 30 value 93.718192 iter 40 value 92.105511 iter 50 value 85.252783 iter 60 value 83.051571 iter 70 value 81.399569 iter 80 value 80.921703 iter 90 value 80.889750 iter 90 value 80.889750 iter 90 value 80.889750 final value 80.889750 converged Fitting Repeat 1 # weights: 305 initial value 119.012455 iter 10 value 94.928659 iter 20 value 93.127050 iter 30 value 87.069681 iter 40 value 80.431128 iter 50 value 79.776393 iter 60 value 79.547715 iter 70 value 78.866388 iter 80 value 78.586768 iter 90 value 78.340955 iter 100 value 78.300311 final value 78.300311 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 105.133429 iter 10 value 94.487511 iter 20 value 92.686650 iter 30 value 87.246982 iter 40 value 86.116453 iter 50 value 81.628600 iter 60 value 80.671663 iter 70 value 80.096908 iter 80 value 79.537660 iter 90 value 79.115051 iter 100 value 78.507478 final value 78.507478 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 107.992796 iter 10 value 94.490831 iter 20 value 93.134489 iter 30 value 87.413694 iter 40 value 80.621291 iter 50 value 80.193364 iter 60 value 78.906847 iter 70 value 78.465173 iter 80 value 77.925495 iter 90 value 77.595700 iter 100 value 77.468900 final value 77.468900 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 100.346944 iter 10 value 85.102077 iter 20 value 82.971208 iter 30 value 81.257136 iter 40 value 80.956587 iter 50 value 80.528018 iter 60 value 80.317003 iter 70 value 78.380070 iter 80 value 78.184026 iter 90 value 77.979310 iter 100 value 77.750106 final value 77.750106 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 102.531603 iter 10 value 94.594820 iter 20 value 90.900685 iter 30 value 90.571806 iter 40 value 89.904330 iter 50 value 85.156717 iter 60 value 82.581326 iter 70 value 79.841396 iter 80 value 78.307283 iter 90 value 77.657980 iter 100 value 77.156520 final value 77.156520 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 124.662347 iter 10 value 101.967396 iter 20 value 94.683751 iter 30 value 93.300051 iter 40 value 89.962249 iter 50 value 84.668266 iter 60 value 80.224830 iter 70 value 79.682423 iter 80 value 78.428121 iter 90 value 77.905093 iter 100 value 77.420951 final value 77.420951 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 130.624225 iter 10 value 94.307628 iter 20 value 87.193716 iter 30 value 85.422538 iter 40 value 82.180824 iter 50 value 78.612058 iter 60 value 78.215481 iter 70 value 78.070054 iter 80 value 78.012187 iter 90 value 77.725670 iter 100 value 77.663650 final value 77.663650 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 103.261234 iter 10 value 94.456254 iter 20 value 84.230220 iter 30 value 83.157657 iter 40 value 81.371144 iter 50 value 79.778516 iter 60 value 78.795172 iter 70 value 78.602014 iter 80 value 78.409876 iter 90 value 78.256370 iter 100 value 78.017074 final value 78.017074 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 114.915595 iter 10 value 94.795385 iter 20 value 94.253358 iter 30 value 85.060580 iter 40 value 83.564690 iter 50 value 83.402822 iter 60 value 83.320713 iter 70 value 83.307013 iter 80 value 81.879473 iter 90 value 81.375054 iter 100 value 81.105006 final value 81.105006 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 105.706702 iter 10 value 94.543817 iter 20 value 92.566134 iter 30 value 84.954923 iter 40 value 80.591657 iter 50 value 78.820193 iter 60 value 77.978192 iter 70 value 77.677732 iter 80 value 77.243340 iter 90 value 77.009529 iter 100 value 76.718524 final value 76.718524 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 101.582126 iter 10 value 94.486042 iter 20 value 94.484283 iter 30 value 94.465580 iter 40 value 82.808131 iter 50 value 82.805467 iter 60 value 82.719063 iter 70 value 82.690213 final value 82.690071 converged Fitting Repeat 2 # weights: 103 initial value 101.586356 final value 94.485856 converged Fitting Repeat 3 # weights: 103 initial value 103.094199 iter 10 value 94.485903 iter 20 value 94.484290 final value 94.484213 converged Fitting Repeat 4 # weights: 103 initial value 99.654969 iter 10 value 94.430102 iter 20 value 94.429480 final value 94.428270 converged Fitting Repeat 5 # weights: 103 initial value 108.207663 iter 10 value 94.468469 iter 20 value 94.467672 iter 20 value 94.467671 iter 20 value 94.467671 final value 94.467671 converged Fitting Repeat 1 # weights: 305 initial value 94.416305 iter 10 value 87.357428 iter 20 value 86.948711 iter 30 value 86.947501 iter 40 value 86.881419 iter 50 value 85.215602 iter 60 value 85.211883 final value 85.211725 converged Fitting Repeat 2 # weights: 305 initial value 100.723588 iter 10 value 94.471122 iter 20 value 94.308795 final value 93.560445 converged Fitting Repeat 3 # weights: 305 initial value 97.755084 iter 10 value 94.471720 iter 20 value 94.468586 iter 30 value 94.468345 iter 40 value 94.161676 iter 50 value 82.790881 iter 60 value 82.742870 final value 82.742614 converged Fitting Repeat 4 # weights: 305 initial value 102.453055 iter 10 value 94.249079 iter 20 value 93.746219 iter 30 value 87.963858 iter 40 value 83.473676 iter 50 value 83.376180 iter 60 value 83.323279 iter 70 value 83.322075 iter 80 value 83.321901 iter 90 value 83.319038 final value 83.318865 converged Fitting Repeat 5 # weights: 305 initial value 98.249343 iter 10 value 94.489665 iter 20 value 94.464402 iter 30 value 85.417936 iter 40 value 85.280384 iter 50 value 85.278728 final value 85.278712 converged Fitting Repeat 1 # weights: 507 initial value 117.760314 iter 10 value 94.493072 iter 20 value 94.480218 iter 30 value 85.425027 iter 40 value 85.183059 iter 50 value 84.421978 iter 60 value 80.367395 iter 70 value 80.267911 iter 80 value 80.267558 iter 90 value 80.187912 iter 100 value 80.098608 final value 80.098608 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 108.230945 iter 10 value 94.546487 iter 20 value 94.437610 iter 30 value 94.435336 iter 40 value 82.737670 iter 50 value 81.845488 iter 60 value 81.840692 iter 70 value 81.825969 iter 80 value 81.823874 iter 90 value 81.814010 iter 100 value 80.041036 final value 80.041036 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 104.466803 iter 10 value 94.492336 iter 20 value 94.373517 iter 30 value 88.574022 iter 40 value 88.288194 iter 50 value 82.103182 iter 60 value 82.030236 iter 70 value 82.016151 final value 82.016083 converged Fitting Repeat 4 # weights: 507 initial value 107.216827 iter 10 value 94.488913 iter 20 value 86.561799 iter 30 value 86.036470 iter 40 value 85.677606 iter 50 value 85.401671 iter 60 value 84.809712 iter 70 value 84.264576 iter 80 value 84.201642 iter 90 value 84.200363 iter 100 value 84.199926 final value 84.199926 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 109.511239 iter 10 value 94.475061 iter 20 value 94.429747 iter 30 value 83.321117 iter 40 value 82.624296 iter 50 value 82.623706 iter 60 value 81.734350 iter 70 value 81.394084 iter 80 value 81.269979 iter 90 value 81.255653 iter 90 value 81.255652 iter 90 value 81.255652 final value 81.255652 converged Fitting Repeat 1 # weights: 305 initial value 131.921827 iter 10 value 117.916948 iter 20 value 117.884865 iter 30 value 112.086616 iter 40 value 106.240491 iter 50 value 103.180860 iter 60 value 102.920599 iter 70 value 102.690082 iter 80 value 101.957078 iter 90 value 101.233571 iter 100 value 101.107658 final value 101.107658 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 170.406285 iter 10 value 125.951727 iter 20 value 116.917354 iter 30 value 115.607995 iter 40 value 105.192231 iter 50 value 104.470036 iter 60 value 104.244754 iter 70 value 103.796620 iter 80 value 103.239556 iter 90 value 102.212433 iter 100 value 101.875323 final value 101.875323 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 147.455086 iter 10 value 117.906943 iter 20 value 112.912582 iter 30 value 108.049230 iter 40 value 107.403904 iter 50 value 107.187321 iter 60 value 106.346756 iter 70 value 105.884810 iter 80 value 104.594302 iter 90 value 104.328074 iter 100 value 104.299306 final value 104.299306 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 132.088231 iter 10 value 117.838686 iter 20 value 117.560426 iter 30 value 110.773624 iter 40 value 107.505964 iter 50 value 106.409847 iter 60 value 105.713578 iter 70 value 105.575930 iter 80 value 104.559158 iter 90 value 102.821049 iter 100 value 102.150956 final value 102.150956 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 124.210143 iter 10 value 117.233489 iter 20 value 108.932745 iter 30 value 106.293797 iter 40 value 105.530752 iter 50 value 104.207330 iter 60 value 101.813557 iter 70 value 100.976888 iter 80 value 100.602481 iter 90 value 100.425323 iter 100 value 100.379427 final value 100.379427 stopped after 100 iterations svmRadial ranger Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases RUNIT TEST PROTOCOL -- Tue Jul 16 01:20:10 2024 *********************************************** Number of test functions: 7 Number of errors: 0 Number of failures: 0 1 Test Suite : HPiP RUnit Tests - 7 test functions, 0 errors, 0 failures Number of test functions: 7 Number of errors: 0 Number of failures: 0 Warning messages: 1: `repeats` has no meaning for this resampling method. 2: executing %dopar% sequentially: no parallel backend registered > > > > > proc.time() user system elapsed 47.09 1.96 49.31
HPiP.Rcheck/HPiP-Ex.timings
name | user | system | elapsed | |
FSmethod | 34.46 | 2.23 | 36.74 | |
FreqInteractors | 0.28 | 0.02 | 0.33 | |
calculateAAC | 0.04 | 0.00 | 0.03 | |
calculateAutocor | 0.43 | 0.09 | 0.53 | |
calculateCTDC | 0.07 | 0.02 | 0.08 | |
calculateCTDD | 0.75 | 0.03 | 0.78 | |
calculateCTDT | 0.39 | 0.00 | 0.39 | |
calculateCTriad | 0.50 | 0.03 | 0.54 | |
calculateDC | 0.11 | 0.00 | 0.11 | |
calculateF | 0.39 | 0.03 | 0.42 | |
calculateKSAAP | 0.14 | 0.02 | 0.15 | |
calculateQD_Sm | 2.26 | 0.17 | 2.44 | |
calculateTC | 1.86 | 0.04 | 1.91 | |
calculateTC_Sm | 0.28 | 0.05 | 0.33 | |
corr_plot | 33.67 | 1.47 | 35.17 | |
enrichfindP | 0.63 | 0.16 | 12.97 | |
enrichfind_hp | 0.08 | 0.01 | 1.03 | |
enrichplot | 0.47 | 0.00 | 0.47 | |
filter_missing_values | 0 | 0 | 0 | |
getFASTA | 0.03 | 0.00 | 2.32 | |
getHPI | 0 | 0 | 0 | |
get_negativePPI | 0.01 | 0.00 | 0.02 | |
get_positivePPI | 0 | 0 | 0 | |
impute_missing_data | 0 | 0 | 0 | |
plotPPI | 0.10 | 0.00 | 0.11 | |
pred_ensembel | 15.04 | 0.41 | 11.23 | |
var_imp | 35.79 | 1.23 | 37.02 | |