Back to Multiple platform build/check report for BioC 3.20: simplified long |
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This page was generated on 2024-07-16 11:39 -0400 (Tue, 16 Jul 2024).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4677 |
palomino6 | Windows Server 2022 Datacenter | x64 | 4.4.1 (2024-06-14 ucrt) -- "Race for Your Life" | 4416 |
lconway | macOS 12.7.1 Monterey | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4444 |
kjohnson3 | macOS 13.6.5 Ventura | arm64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4393 |
palomino8 | Windows Server 2022 Datacenter | x64 | 4.4.1 (2024-06-14 ucrt) -- "Race for Your Life" | 4373 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
Package 963/2243 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
HPiP 1.11.0 (landing page) Matineh Rahmatbakhsh
| nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | OK | OK | ![]() | ||||||||
palomino6 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | |||||||||
lconway | macOS 12.7.1 Monterey / x86_64 | OK | OK | OK | OK | ![]() | ||||||||
kjohnson3 | macOS 13.6.5 Ventura / arm64 | OK | OK | OK | OK | ![]() | ||||||||
palomino8 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | |||||||||
To the developers/maintainers of the HPiP package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/HPiP.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
Package: HPiP |
Version: 1.11.0 |
Command: /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD check --install=check:HPiP.install-out.txt --library=/home/biocbuild/bbs-3.20-bioc/R/site-library --timings HPiP_1.11.0.tar.gz |
StartedAt: 2024-07-15 23:44:39 -0400 (Mon, 15 Jul 2024) |
EndedAt: 2024-07-15 23:58:05 -0400 (Mon, 15 Jul 2024) |
EllapsedTime: 805.5 seconds |
RetCode: 0 |
Status: OK |
CheckDir: HPiP.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD check --install=check:HPiP.install-out.txt --library=/home/biocbuild/bbs-3.20-bioc/R/site-library --timings HPiP_1.11.0.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/home/biocbuild/bbs-3.20-bioc/meat/HPiP.Rcheck’ * using R version 4.4.1 (2024-06-14) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0 GNU Fortran (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0 * running under: Ubuntu 22.04.4 LTS * using session charset: UTF-8 * checking for file ‘HPiP/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘HPiP’ version ‘1.11.0’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘HPiP’ can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... NOTE License stub is invalid DCF. * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... NOTE checkRd: (-1) getHPI.Rd:29: Lost braces 29 | then the Kronecker product is the code{(pm × qn)} block matrix | ^ * checking Rd metadata ... OK * checking Rd cross-references ... NOTE Package unavailable to check Rd xrefs: ‘ftrCOOL’ * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking R/sysdata.rda ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK Examples with CPU (user + system) or elapsed time > 5s user system elapsed var_imp 35.685 1.004 36.691 FSmethod 33.524 0.612 34.137 corr_plot 33.574 0.388 33.962 pred_ensembel 13.356 0.578 10.709 enrichfindP 0.535 0.049 8.682 * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘runTests.R’ OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE Status: 3 NOTEs See ‘/home/biocbuild/bbs-3.20-bioc/meat/HPiP.Rcheck/00check.log’ for details.
HPiP.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD INSTALL HPiP ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.20-bioc/R/site-library’ * installing *source* package ‘HPiP’ ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (HPiP)
HPiP.Rcheck/tests/runTests.Rout
R version 4.4.1 (2024-06-14) -- "Race for Your Life" Copyright (C) 2024 The R Foundation for Statistical Computing Platform: x86_64-pc-linux-gnu R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > BiocGenerics:::testPackage('HPiP') No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE avNNet Loading required package: ggplot2 Loading required package: lattice Fitting Repeat 1 # weights: 103 initial value 100.859911 final value 93.653871 converged Fitting Repeat 2 # weights: 103 initial value 95.622885 final value 94.052910 converged Fitting Repeat 3 # weights: 103 initial value 99.133809 final value 94.052910 converged Fitting Repeat 4 # weights: 103 initial value 95.250006 final value 94.052910 converged Fitting Repeat 5 # weights: 103 initial value 102.064465 final value 94.052910 converged Fitting Repeat 1 # weights: 305 initial value 97.118297 final value 94.052910 converged Fitting Repeat 2 # weights: 305 initial value 101.942501 final value 94.052910 converged Fitting Repeat 3 # weights: 305 initial value 107.233594 final value 94.052910 converged Fitting Repeat 4 # weights: 305 initial value 98.622144 final value 94.052910 converged Fitting Repeat 5 # weights: 305 initial value 100.269797 final value 94.032967 converged Fitting Repeat 1 # weights: 507 initial value 116.472589 iter 10 value 94.032967 iter 10 value 94.032967 iter 10 value 94.032967 final value 94.032967 converged Fitting Repeat 2 # weights: 507 initial value 122.788540 final value 94.052910 converged Fitting Repeat 3 # weights: 507 initial value 105.251756 iter 10 value 93.122180 final value 93.090905 converged Fitting Repeat 4 # weights: 507 initial value 100.920154 iter 10 value 93.925825 iter 20 value 93.890136 final value 93.890111 converged Fitting Repeat 5 # weights: 507 initial value 124.911094 final value 94.032967 converged Fitting Repeat 1 # weights: 103 initial value 99.674553 iter 10 value 87.412384 iter 20 value 86.972667 iter 30 value 86.718309 iter 40 value 86.623619 iter 50 value 86.237366 iter 60 value 85.737165 iter 70 value 85.262113 iter 80 value 85.221442 final value 85.208465 converged Fitting Repeat 2 # weights: 103 initial value 98.920555 iter 10 value 94.029329 iter 20 value 88.166487 iter 30 value 86.997892 iter 40 value 86.403643 iter 50 value 84.482003 iter 60 value 84.089702 iter 70 value 84.044718 iter 80 value 84.031166 iter 90 value 84.026803 iter 90 value 84.026802 iter 90 value 84.026802 final value 84.026802 converged Fitting Repeat 3 # weights: 103 initial value 96.932685 iter 10 value 93.872459 iter 20 value 86.530349 iter 30 value 85.408800 iter 40 value 85.101792 iter 50 value 84.637114 iter 60 value 82.446607 iter 70 value 82.005630 iter 80 value 81.936232 iter 90 value 81.469091 iter 100 value 81.335479 final value 81.335479 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 100.387604 iter 10 value 94.058083 iter 20 value 94.019823 iter 30 value 93.722942 iter 40 value 93.656794 iter 50 value 92.402432 iter 60 value 87.330671 iter 70 value 86.679113 iter 80 value 86.017848 iter 90 value 85.996752 final value 85.996740 converged Fitting Repeat 5 # weights: 103 initial value 105.754578 iter 10 value 94.054857 iter 20 value 93.305990 iter 30 value 93.169006 iter 40 value 93.151009 iter 50 value 87.645932 iter 60 value 86.850480 iter 70 value 85.512181 iter 80 value 85.483956 iter 90 value 85.093168 iter 100 value 84.929306 final value 84.929306 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 102.510744 iter 10 value 94.152215 iter 20 value 92.393266 iter 30 value 90.383361 iter 40 value 86.841719 iter 50 value 84.890097 iter 60 value 84.069187 iter 70 value 81.858005 iter 80 value 81.146004 iter 90 value 80.643957 iter 100 value 80.467800 final value 80.467800 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 103.912978 iter 10 value 94.091770 iter 20 value 93.929608 iter 30 value 92.016457 iter 40 value 88.619187 iter 50 value 88.196246 iter 60 value 84.276284 iter 70 value 82.020807 iter 80 value 81.063761 iter 90 value 80.982550 iter 100 value 80.889705 final value 80.889705 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 102.059747 iter 10 value 94.397336 iter 20 value 92.991801 iter 30 value 86.615304 iter 40 value 83.145389 iter 50 value 82.426643 iter 60 value 82.195509 iter 70 value 82.045039 iter 80 value 81.961037 iter 90 value 81.331898 iter 100 value 80.428604 final value 80.428604 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 106.735461 iter 10 value 94.168648 iter 20 value 93.215192 iter 30 value 88.964980 iter 40 value 83.827379 iter 50 value 83.152690 iter 60 value 81.704101 iter 70 value 80.949931 iter 80 value 80.700468 iter 90 value 80.387795 iter 100 value 80.234276 final value 80.234276 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 99.883843 iter 10 value 94.198058 iter 20 value 94.057183 iter 30 value 93.871628 iter 40 value 92.292328 iter 50 value 88.576852 iter 60 value 86.263215 iter 70 value 84.307788 iter 80 value 82.861205 iter 90 value 81.289940 iter 100 value 81.035040 final value 81.035040 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 106.940735 iter 10 value 94.226238 iter 20 value 92.009953 iter 30 value 90.355059 iter 40 value 88.259138 iter 50 value 84.473156 iter 60 value 83.859115 iter 70 value 83.131412 iter 80 value 82.222231 iter 90 value 81.747844 iter 100 value 81.138852 final value 81.138852 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 108.606195 iter 10 value 94.461379 iter 20 value 93.823624 iter 30 value 89.206632 iter 40 value 87.119271 iter 50 value 82.768444 iter 60 value 81.733133 iter 70 value 81.437208 iter 80 value 80.870116 iter 90 value 80.530969 iter 100 value 80.273363 final value 80.273363 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 111.073051 iter 10 value 94.109274 iter 20 value 92.996386 iter 30 value 86.440306 iter 40 value 84.071493 iter 50 value 81.562002 iter 60 value 80.831636 iter 70 value 80.541815 iter 80 value 80.234012 iter 90 value 80.104343 iter 100 value 79.887199 final value 79.887199 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 109.773688 iter 10 value 97.290035 iter 20 value 89.300422 iter 30 value 86.805088 iter 40 value 86.294997 iter 50 value 85.920795 iter 60 value 85.072989 iter 70 value 82.734601 iter 80 value 81.554851 iter 90 value 81.137441 iter 100 value 80.885454 final value 80.885454 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 122.146772 iter 10 value 94.680917 iter 20 value 93.962429 iter 30 value 93.493907 iter 40 value 88.112161 iter 50 value 86.254401 iter 60 value 82.596525 iter 70 value 81.535582 iter 80 value 80.680524 iter 90 value 80.425335 iter 100 value 80.225381 final value 80.225381 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 99.042506 final value 94.054542 converged Fitting Repeat 2 # weights: 103 initial value 97.071536 final value 94.054409 converged Fitting Repeat 3 # weights: 103 initial value 98.970364 final value 94.054538 converged Fitting Repeat 4 # weights: 103 initial value 101.917351 iter 10 value 94.054574 iter 20 value 94.052917 iter 20 value 94.052917 iter 20 value 94.052917 final value 94.052917 converged Fitting Repeat 5 # weights: 103 initial value 97.492868 iter 10 value 94.052914 iter 20 value 85.882535 iter 30 value 85.605701 final value 85.605695 converged Fitting Repeat 1 # weights: 305 initial value 122.040719 iter 10 value 94.057571 iter 20 value 93.103927 iter 30 value 85.154649 iter 40 value 84.857767 iter 50 value 84.186550 iter 60 value 84.047329 iter 70 value 84.045195 final value 84.044826 converged Fitting Repeat 2 # weights: 305 initial value 107.789660 iter 10 value 94.037855 iter 20 value 86.649511 iter 30 value 84.887769 iter 40 value 83.743538 iter 50 value 80.640466 iter 60 value 80.619850 iter 70 value 80.619758 iter 80 value 80.619106 final value 80.619076 converged Fitting Repeat 3 # weights: 305 initial value 99.396047 iter 10 value 94.037285 iter 20 value 93.220276 iter 30 value 92.998263 iter 40 value 92.983201 iter 50 value 85.178760 iter 60 value 85.159771 iter 70 value 85.158996 iter 80 value 85.155830 final value 85.155747 converged Fitting Repeat 4 # weights: 305 initial value 95.283359 iter 10 value 94.037805 iter 20 value 91.975764 iter 30 value 84.614685 final value 84.605088 converged Fitting Repeat 5 # weights: 305 initial value 96.878797 iter 10 value 94.054554 iter 20 value 93.742523 iter 30 value 87.724626 iter 40 value 87.719891 iter 50 value 85.956849 iter 60 value 85.323987 iter 70 value 84.511996 iter 80 value 82.562408 iter 90 value 82.494450 iter 100 value 82.494025 final value 82.494025 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 102.965705 iter 10 value 94.041542 iter 20 value 93.442810 iter 30 value 88.055852 iter 40 value 85.594017 iter 50 value 84.214700 iter 60 value 84.183973 iter 70 value 83.589866 iter 80 value 82.484542 iter 90 value 82.481895 iter 90 value 82.481895 final value 82.481895 converged Fitting Repeat 2 # weights: 507 initial value 104.784183 iter 10 value 94.061377 iter 20 value 94.051075 iter 30 value 93.092133 iter 40 value 93.091508 final value 93.091499 converged Fitting Repeat 3 # weights: 507 initial value 99.914796 iter 10 value 94.040982 iter 20 value 93.994559 iter 30 value 86.275743 iter 40 value 85.984047 iter 50 value 85.407659 iter 50 value 85.407659 final value 85.407659 converged Fitting Repeat 4 # weights: 507 initial value 123.188248 iter 10 value 94.060735 iter 20 value 94.052994 iter 30 value 89.508588 iter 40 value 85.247027 iter 50 value 81.720674 iter 60 value 79.897519 iter 70 value 79.569702 iter 80 value 79.558156 iter 90 value 79.435763 iter 100 value 79.346794 final value 79.346794 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 109.548666 iter 10 value 85.218905 iter 20 value 84.895570 final value 84.891666 converged Fitting Repeat 1 # weights: 103 initial value 100.983955 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 104.187555 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 98.527135 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 104.058502 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 95.199626 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 97.442930 final value 94.484211 converged Fitting Repeat 2 # weights: 305 initial value 103.730426 final value 94.484212 converged Fitting Repeat 3 # weights: 305 initial value 99.910877 final value 94.275362 converged Fitting Repeat 4 # weights: 305 initial value 97.940975 final value 94.484211 converged Fitting Repeat 5 # weights: 305 initial value 109.708765 iter 10 value 94.275366 iter 10 value 94.275365 iter 10 value 94.275365 final value 94.275365 converged Fitting Repeat 1 # weights: 507 initial value 106.538569 final value 94.275362 converged Fitting Repeat 2 # weights: 507 initial value 110.552077 final value 94.275362 converged Fitting Repeat 3 # weights: 507 initial value 94.605504 final value 94.484211 converged Fitting Repeat 4 # weights: 507 initial value 97.027083 iter 10 value 92.529570 final value 92.452063 converged Fitting Repeat 5 # weights: 507 initial value 114.900627 final value 94.484211 converged Fitting Repeat 1 # weights: 103 initial value 99.607089 iter 10 value 88.338675 iter 20 value 86.249350 iter 30 value 84.252503 iter 40 value 82.253441 iter 50 value 81.633325 iter 60 value 81.077729 iter 70 value 80.952906 iter 80 value 80.919343 iter 90 value 80.886257 iter 90 value 80.886256 iter 90 value 80.886256 final value 80.886256 converged Fitting Repeat 2 # weights: 103 initial value 98.380837 iter 10 value 89.771691 iter 20 value 88.237852 iter 30 value 83.989241 iter 40 value 83.453834 iter 50 value 83.392132 iter 60 value 82.962461 iter 70 value 82.864827 iter 80 value 82.859392 final value 82.859198 converged Fitting Repeat 3 # weights: 103 initial value 98.722390 iter 10 value 94.478268 iter 20 value 86.276486 iter 30 value 84.673788 iter 40 value 83.870966 iter 50 value 83.397740 iter 60 value 83.196565 iter 70 value 83.193980 iter 80 value 83.176394 iter 90 value 83.160452 final value 83.160401 converged Fitting Repeat 4 # weights: 103 initial value 97.516467 iter 10 value 94.486554 iter 20 value 89.521785 iter 30 value 83.804869 iter 40 value 83.318677 iter 50 value 83.132472 iter 60 value 82.738479 iter 70 value 82.357233 iter 80 value 82.305387 final value 82.305347 converged Fitting Repeat 5 # weights: 103 initial value 101.194610 iter 10 value 94.493907 iter 20 value 94.341600 iter 30 value 94.331067 iter 40 value 94.328512 iter 50 value 94.327935 iter 60 value 90.806617 iter 70 value 84.108300 iter 80 value 83.483753 iter 90 value 83.139246 iter 100 value 82.811528 final value 82.811528 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 100.972795 iter 10 value 94.450481 iter 20 value 90.089108 iter 30 value 89.430604 iter 40 value 88.648864 iter 50 value 84.794470 iter 60 value 83.504309 iter 70 value 82.548659 iter 80 value 80.546775 iter 90 value 80.123636 iter 100 value 80.079987 final value 80.079987 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 107.146094 iter 10 value 94.496652 iter 20 value 92.656454 iter 30 value 89.409495 iter 40 value 87.982679 iter 50 value 83.256742 iter 60 value 82.715857 iter 70 value 82.194054 iter 80 value 81.726113 iter 90 value 80.760254 iter 100 value 80.129369 final value 80.129369 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 100.551575 iter 10 value 94.245395 iter 20 value 88.129541 iter 30 value 86.169273 iter 40 value 83.874238 iter 50 value 82.902365 iter 60 value 81.459354 iter 70 value 80.975610 iter 80 value 80.789806 iter 90 value 80.650105 iter 100 value 80.482895 final value 80.482895 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 109.582099 iter 10 value 94.548308 iter 20 value 94.129669 iter 30 value 90.279608 iter 40 value 86.531870 iter 50 value 84.816138 iter 60 value 83.044395 iter 70 value 81.710536 iter 80 value 81.437911 iter 90 value 81.086559 iter 100 value 80.877183 final value 80.877183 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 101.245474 iter 10 value 94.438289 iter 20 value 84.301964 iter 30 value 83.789164 iter 40 value 83.382255 iter 50 value 82.652750 iter 60 value 82.194703 iter 70 value 81.636855 iter 80 value 81.246131 iter 90 value 81.002869 iter 100 value 80.746475 final value 80.746475 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 109.612650 iter 10 value 92.043548 iter 20 value 91.167806 iter 30 value 88.729093 iter 40 value 83.708715 iter 50 value 81.842681 iter 60 value 80.838650 iter 70 value 80.416336 iter 80 value 79.684799 iter 90 value 79.394348 iter 100 value 79.234289 final value 79.234289 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 109.387110 iter 10 value 95.220483 iter 20 value 94.335753 iter 30 value 94.091016 iter 40 value 88.740798 iter 50 value 85.045396 iter 60 value 82.590087 iter 70 value 81.930504 iter 80 value 81.319373 iter 90 value 80.128360 iter 100 value 79.869055 final value 79.869055 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 112.407747 iter 10 value 94.203477 iter 20 value 89.183873 iter 30 value 84.499888 iter 40 value 82.948549 iter 50 value 81.629891 iter 60 value 81.207213 iter 70 value 81.136046 iter 80 value 80.964575 iter 90 value 80.656666 iter 100 value 80.122734 final value 80.122734 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 110.265594 iter 10 value 91.715235 iter 20 value 89.604547 iter 30 value 88.066024 iter 40 value 84.918453 iter 50 value 84.232250 iter 60 value 84.077776 iter 70 value 82.685999 iter 80 value 81.952395 iter 90 value 80.485951 iter 100 value 79.985060 final value 79.985060 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 110.613039 iter 10 value 96.055501 iter 20 value 94.481747 iter 30 value 93.314364 iter 40 value 87.511669 iter 50 value 83.998701 iter 60 value 83.568068 iter 70 value 83.196863 iter 80 value 80.935250 iter 90 value 79.947556 iter 100 value 79.717800 final value 79.717800 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 94.985933 final value 94.485776 converged Fitting Repeat 2 # weights: 103 initial value 100.702024 final value 94.444847 converged Fitting Repeat 3 # weights: 103 initial value 103.588244 final value 94.485589 converged Fitting Repeat 4 # weights: 103 initial value 102.648588 final value 94.486109 converged Fitting Repeat 5 # weights: 103 initial value 106.639642 final value 94.485783 converged Fitting Repeat 1 # weights: 305 initial value 121.205117 iter 10 value 94.488801 iter 20 value 94.364388 final value 94.275758 converged Fitting Repeat 2 # weights: 305 initial value 101.791249 iter 10 value 94.489414 iter 20 value 91.326191 iter 30 value 83.292517 iter 40 value 83.291202 iter 40 value 83.291202 final value 83.291202 converged Fitting Repeat 3 # weights: 305 initial value 100.107830 iter 10 value 89.535496 iter 20 value 85.419935 iter 30 value 85.369438 iter 40 value 85.131270 iter 50 value 82.891462 iter 60 value 82.404907 iter 70 value 81.392685 iter 80 value 81.190733 iter 90 value 81.190162 final value 81.189866 converged Fitting Repeat 4 # weights: 305 initial value 95.830738 iter 10 value 92.996739 iter 20 value 92.759064 iter 30 value 83.508356 iter 40 value 83.409568 iter 50 value 83.409344 iter 60 value 83.406282 iter 70 value 82.894459 final value 82.894366 converged Fitting Repeat 5 # weights: 305 initial value 101.616268 iter 10 value 94.489289 iter 20 value 94.226895 iter 30 value 91.011376 iter 40 value 89.927291 iter 50 value 89.585607 iter 60 value 89.397674 iter 70 value 85.197489 iter 80 value 85.152674 iter 90 value 84.627540 iter 100 value 84.372705 final value 84.372705 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 95.751333 iter 10 value 94.283864 iter 20 value 94.276699 final value 94.275712 converged Fitting Repeat 2 # weights: 507 initial value 108.556816 iter 10 value 92.623241 iter 20 value 91.136764 iter 30 value 84.374657 iter 40 value 84.134777 iter 50 value 83.615951 iter 60 value 83.570554 final value 83.570474 converged Fitting Repeat 3 # weights: 507 initial value 103.355561 iter 10 value 86.423404 iter 20 value 83.542996 iter 30 value 83.155617 iter 40 value 83.035626 iter 50 value 82.410907 iter 60 value 82.393924 iter 70 value 82.392193 iter 80 value 82.386425 iter 90 value 82.380273 iter 100 value 82.379268 final value 82.379268 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 104.257524 iter 10 value 94.284223 iter 20 value 94.277026 iter 30 value 87.278546 iter 40 value 84.436099 iter 50 value 84.418797 iter 60 value 84.418238 iter 60 value 84.418238 final value 84.418238 converged Fitting Repeat 5 # weights: 507 initial value 103.952423 iter 10 value 94.492562 iter 20 value 94.326006 iter 30 value 90.243309 iter 40 value 83.593889 iter 50 value 82.987262 iter 60 value 82.843035 final value 82.843016 converged Fitting Repeat 1 # weights: 103 initial value 105.460496 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 95.630327 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 104.896429 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 95.721786 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 96.773593 final value 94.483810 converged Fitting Repeat 1 # weights: 305 initial value 101.802071 final value 94.484211 converged Fitting Repeat 2 # weights: 305 initial value 101.095173 final value 94.484211 converged Fitting Repeat 3 # weights: 305 initial value 97.249796 iter 10 value 91.908162 iter 20 value 83.479427 iter 30 value 82.880371 final value 82.835465 converged Fitting Repeat 4 # weights: 305 initial value 100.338163 final value 94.484211 converged Fitting Repeat 5 # weights: 305 initial value 94.605853 final value 94.484211 converged Fitting Repeat 1 # weights: 507 initial value 97.960034 iter 10 value 93.866582 final value 93.866530 converged Fitting Repeat 2 # weights: 507 initial value 109.367316 final value 94.026542 converged Fitting Repeat 3 # weights: 507 initial value 98.245122 final value 94.057229 converged Fitting Repeat 4 # weights: 507 initial value 115.712866 iter 10 value 93.805718 iter 20 value 93.777811 final value 93.777778 converged Fitting Repeat 5 # weights: 507 initial value 103.687802 iter 10 value 93.810742 iter 20 value 93.797253 iter 30 value 93.785598 final value 93.785584 converged Fitting Repeat 1 # weights: 103 initial value 98.687266 iter 10 value 95.227538 iter 20 value 94.500470 iter 30 value 94.416196 iter 40 value 94.139168 iter 50 value 93.893299 iter 60 value 91.427530 iter 70 value 87.458398 iter 80 value 86.882169 iter 90 value 86.548049 iter 100 value 86.539232 final value 86.539232 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 98.685981 iter 10 value 94.373644 iter 20 value 86.663268 iter 30 value 85.866603 iter 40 value 85.605686 iter 50 value 83.769926 iter 60 value 82.623997 iter 70 value 81.965258 final value 81.962284 converged Fitting Repeat 3 # weights: 103 initial value 99.981321 iter 10 value 94.154182 iter 20 value 93.937569 iter 30 value 93.644258 iter 40 value 93.627184 iter 50 value 91.300022 iter 60 value 85.950715 iter 70 value 85.845496 iter 80 value 85.800437 iter 90 value 84.837336 iter 100 value 84.019899 final value 84.019899 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 100.150030 iter 10 value 94.483804 iter 20 value 91.270375 iter 30 value 85.483531 iter 40 value 84.557945 iter 50 value 84.099992 iter 60 value 83.863997 iter 70 value 83.817958 iter 80 value 83.803949 final value 83.803945 converged Fitting Repeat 5 # weights: 103 initial value 98.859938 iter 10 value 94.400406 iter 20 value 85.202444 iter 30 value 84.560854 iter 40 value 84.342029 iter 50 value 83.954087 iter 60 value 83.766999 iter 70 value 83.646550 iter 80 value 83.628462 final value 83.628455 converged Fitting Repeat 1 # weights: 305 initial value 109.220395 iter 10 value 94.806982 iter 20 value 94.206228 iter 30 value 93.828981 iter 40 value 85.631030 iter 50 value 83.924814 iter 60 value 83.433886 iter 70 value 81.506322 iter 80 value 80.996553 iter 90 value 80.913206 iter 100 value 80.837647 final value 80.837647 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 112.072231 iter 10 value 94.485887 iter 20 value 92.459204 iter 30 value 88.349745 iter 40 value 87.197663 iter 50 value 86.778958 iter 60 value 86.342368 iter 70 value 82.364743 iter 80 value 81.809608 iter 90 value 81.068303 iter 100 value 80.825549 final value 80.825549 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 102.814733 iter 10 value 89.823878 iter 20 value 87.228389 iter 30 value 86.458974 iter 40 value 85.983577 iter 50 value 85.789227 iter 60 value 84.544979 iter 70 value 82.740745 iter 80 value 82.210935 iter 90 value 81.371809 iter 100 value 81.013169 final value 81.013169 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 105.170614 iter 10 value 94.139267 iter 20 value 94.118842 iter 30 value 92.349100 iter 40 value 87.020083 iter 50 value 85.204784 iter 60 value 82.983541 iter 70 value 81.713254 iter 80 value 81.296462 iter 90 value 81.205673 iter 100 value 81.160633 final value 81.160633 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 112.374513 iter 10 value 94.622161 iter 20 value 94.314310 iter 30 value 91.900462 iter 40 value 90.221174 iter 50 value 87.723605 iter 60 value 85.961299 iter 70 value 85.564693 iter 80 value 84.666430 iter 90 value 84.516239 iter 100 value 82.341580 final value 82.341580 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 103.878728 iter 10 value 89.571986 iter 20 value 84.539079 iter 30 value 82.456283 iter 40 value 81.906943 iter 50 value 81.526046 iter 60 value 81.025722 iter 70 value 80.380368 iter 80 value 80.289710 iter 90 value 80.188748 iter 100 value 80.087249 final value 80.087249 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 114.948996 iter 10 value 94.889657 iter 20 value 87.453849 iter 30 value 84.592025 iter 40 value 84.402173 iter 50 value 84.321804 iter 60 value 83.536933 iter 70 value 83.195048 iter 80 value 82.687674 iter 90 value 82.544228 iter 100 value 82.381788 final value 82.381788 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 110.187648 iter 10 value 94.593610 iter 20 value 94.160786 iter 30 value 87.568978 iter 40 value 85.729572 iter 50 value 84.492827 iter 60 value 82.937294 iter 70 value 82.744520 iter 80 value 82.589925 iter 90 value 82.415579 iter 100 value 82.159696 final value 82.159696 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 118.129643 iter 10 value 94.372222 iter 20 value 86.660090 iter 30 value 85.264401 iter 40 value 84.548432 iter 50 value 84.049149 iter 60 value 83.318680 iter 70 value 82.457416 iter 80 value 82.103460 iter 90 value 81.516183 iter 100 value 81.080770 final value 81.080770 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 102.856263 iter 10 value 94.215156 iter 20 value 86.995684 iter 30 value 84.121371 iter 40 value 82.531610 iter 50 value 81.635538 iter 60 value 81.456741 iter 70 value 81.184686 iter 80 value 80.715494 iter 90 value 80.478329 iter 100 value 80.374513 final value 80.374513 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 97.490661 final value 94.485637 converged Fitting Repeat 2 # weights: 103 initial value 97.041009 iter 10 value 94.485952 iter 20 value 94.463486 iter 30 value 94.023219 final value 93.795296 converged Fitting Repeat 3 # weights: 103 initial value 107.406453 final value 94.485812 converged Fitting Repeat 4 # weights: 103 initial value 99.911100 iter 10 value 84.722546 iter 20 value 83.098700 iter 30 value 82.213794 iter 40 value 81.815948 final value 81.602022 converged Fitting Repeat 5 # weights: 103 initial value 98.696657 final value 94.485632 converged Fitting Repeat 1 # weights: 305 initial value 104.198121 iter 10 value 94.488438 iter 20 value 94.438755 iter 30 value 93.809036 iter 40 value 91.365983 iter 50 value 91.092923 iter 60 value 86.381876 iter 70 value 85.582063 iter 80 value 85.564957 iter 90 value 85.539177 iter 100 value 85.538647 final value 85.538647 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 98.680839 iter 10 value 89.798978 iter 20 value 86.925600 iter 30 value 86.205509 iter 40 value 86.204344 iter 50 value 86.145655 iter 60 value 85.920060 iter 70 value 85.908763 iter 80 value 85.904403 iter 90 value 85.892411 iter 100 value 85.884822 final value 85.884822 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 96.719662 iter 10 value 94.488992 iter 20 value 94.484354 iter 30 value 93.831428 iter 40 value 92.298882 iter 50 value 88.121823 iter 60 value 87.770122 iter 70 value 87.472861 iter 80 value 87.448482 iter 90 value 87.328688 iter 100 value 87.241538 final value 87.241538 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 94.609084 iter 10 value 94.486384 iter 20 value 91.979311 iter 30 value 85.880392 iter 40 value 84.151887 iter 50 value 84.003887 iter 60 value 84.002784 iter 70 value 83.127229 iter 80 value 82.244916 iter 90 value 80.322075 iter 100 value 79.798830 final value 79.798830 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 99.324631 iter 10 value 94.488945 iter 20 value 94.480602 iter 30 value 88.873485 iter 40 value 86.093004 iter 50 value 86.083549 iter 60 value 83.423868 iter 70 value 82.593992 iter 80 value 82.593674 iter 90 value 82.560683 iter 100 value 82.437059 final value 82.437059 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 107.637825 iter 10 value 94.490682 iter 20 value 94.375517 iter 30 value 88.709286 iter 40 value 85.906630 final value 85.886984 converged Fitting Repeat 2 # weights: 507 initial value 104.025814 iter 10 value 94.035817 iter 20 value 94.027837 iter 30 value 90.744115 iter 40 value 87.333025 iter 50 value 87.227784 iter 60 value 86.408184 iter 70 value 86.169476 iter 80 value 86.161821 iter 90 value 86.141120 final value 86.133681 converged Fitting Repeat 3 # weights: 507 initial value 105.092437 iter 10 value 94.034637 iter 20 value 94.029442 final value 94.027853 converged Fitting Repeat 4 # weights: 507 initial value 127.775606 iter 10 value 94.493591 iter 20 value 94.485660 final value 94.484734 converged Fitting Repeat 5 # weights: 507 initial value 111.329145 iter 10 value 94.228139 iter 20 value 89.226801 iter 30 value 85.675352 iter 40 value 83.779720 iter 50 value 82.608335 iter 60 value 82.603304 iter 70 value 82.456134 iter 80 value 82.450458 iter 90 value 82.449037 iter 100 value 81.759122 final value 81.759122 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 102.036475 final value 94.052910 converged Fitting Repeat 2 # weights: 103 initial value 102.202434 final value 94.052910 converged Fitting Repeat 3 # weights: 103 initial value 99.842409 final value 94.052910 converged Fitting Repeat 4 # weights: 103 initial value 97.388192 final value 93.836066 converged Fitting Repeat 5 # weights: 103 initial value 95.145584 final value 94.052910 converged Fitting Repeat 1 # weights: 305 initial value 94.461230 final value 94.052910 converged Fitting Repeat 2 # weights: 305 initial value 99.537539 final value 94.052911 converged Fitting Repeat 3 # weights: 305 initial value 98.918580 iter 10 value 93.704969 iter 10 value 93.704969 iter 10 value 93.704969 final value 93.704969 converged Fitting Repeat 4 # weights: 305 initial value 109.115541 final value 94.052910 converged Fitting Repeat 5 # weights: 305 initial value 101.125674 final value 94.052910 converged Fitting Repeat 1 # weights: 507 initial value 102.329948 final value 94.052910 converged Fitting Repeat 2 # weights: 507 initial value 96.982389 final value 93.836066 converged Fitting Repeat 3 # weights: 507 initial value 95.085092 iter 10 value 91.545783 iter 20 value 91.406705 iter 30 value 91.406348 iter 40 value 91.223676 iter 50 value 89.779417 final value 89.456725 converged Fitting Repeat 4 # weights: 507 initial value 95.303904 final value 93.604520 converged Fitting Repeat 5 # weights: 507 initial value 102.709750 final value 93.799152 converged Fitting Repeat 1 # weights: 103 initial value 100.005994 iter 10 value 94.045412 iter 20 value 88.230874 iter 30 value 87.167021 iter 40 value 82.874630 iter 50 value 81.352462 iter 60 value 81.023792 iter 70 value 80.803986 iter 80 value 80.228193 iter 90 value 80.163656 iter 100 value 80.111932 final value 80.111932 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 101.794043 iter 10 value 94.056943 iter 20 value 93.975846 iter 30 value 88.718569 iter 40 value 87.614966 iter 50 value 87.071474 iter 60 value 86.899930 iter 70 value 86.483425 iter 80 value 83.299793 iter 90 value 83.249754 iter 100 value 83.144730 final value 83.144730 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 102.842124 iter 10 value 93.866055 iter 20 value 87.256512 iter 30 value 85.727144 iter 40 value 83.836444 iter 50 value 81.671738 iter 60 value 81.003151 iter 70 value 80.440023 iter 80 value 80.123005 final value 80.111876 converged Fitting Repeat 4 # weights: 103 initial value 101.643211 iter 10 value 94.051120 iter 20 value 93.705289 iter 30 value 93.650922 iter 40 value 93.566225 iter 50 value 90.966571 iter 60 value 90.778488 iter 70 value 82.599187 iter 80 value 80.799535 iter 90 value 80.626337 iter 100 value 80.366874 final value 80.366874 stopped after 100 iterations Fitting Repeat 5 # weights: 103 initial value 96.685702 iter 10 value 93.447690 iter 20 value 83.784759 iter 30 value 82.989089 iter 40 value 82.627249 iter 50 value 82.553642 iter 60 value 82.455371 iter 70 value 81.336789 iter 80 value 80.256122 iter 90 value 80.112508 final value 80.111876 converged Fitting Repeat 1 # weights: 305 initial value 117.014086 iter 10 value 94.107229 iter 20 value 91.276187 iter 30 value 90.227243 iter 40 value 89.717237 iter 50 value 89.188249 iter 60 value 85.811281 iter 70 value 82.585029 iter 80 value 81.480588 iter 90 value 81.108926 iter 100 value 80.634997 final value 80.634997 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 100.141123 iter 10 value 93.982615 iter 20 value 85.324854 iter 30 value 84.671990 iter 40 value 83.102045 iter 50 value 80.626444 iter 60 value 79.793509 iter 70 value 79.207986 iter 80 value 78.825221 iter 90 value 78.660157 iter 100 value 78.447560 final value 78.447560 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 127.487906 iter 10 value 94.059969 iter 20 value 91.448776 iter 30 value 86.284117 iter 40 value 85.791986 iter 50 value 85.274357 iter 60 value 85.000623 iter 70 value 84.830878 iter 80 value 84.762597 iter 90 value 83.480042 iter 100 value 82.665801 final value 82.665801 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 122.327478 iter 10 value 95.012712 iter 20 value 93.970915 iter 30 value 91.936889 iter 40 value 90.433873 iter 50 value 82.895112 iter 60 value 82.222002 iter 70 value 82.101330 iter 80 value 81.816291 iter 90 value 80.667626 iter 100 value 80.034372 final value 80.034372 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 109.892872 iter 10 value 94.054230 iter 20 value 87.092814 iter 30 value 83.091761 iter 40 value 82.618496 iter 50 value 81.769893 iter 60 value 80.700864 iter 70 value 80.381529 iter 80 value 80.252425 iter 90 value 80.247442 iter 100 value 80.228505 final value 80.228505 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 105.987912 iter 10 value 94.266473 iter 20 value 93.858771 iter 30 value 86.129654 iter 40 value 84.625178 iter 50 value 83.770110 iter 60 value 81.879743 iter 70 value 80.773935 iter 80 value 79.987882 iter 90 value 79.154342 iter 100 value 79.046931 final value 79.046931 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 122.891426 iter 10 value 94.012086 iter 20 value 93.450959 iter 30 value 88.144105 iter 40 value 85.918027 iter 50 value 84.907770 iter 60 value 83.790511 iter 70 value 83.502615 iter 80 value 82.699547 iter 90 value 81.559635 iter 100 value 79.514405 final value 79.514405 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 111.193819 iter 10 value 97.474923 iter 20 value 93.257710 iter 30 value 86.728591 iter 40 value 84.349397 iter 50 value 80.271281 iter 60 value 79.804523 iter 70 value 79.702528 iter 80 value 79.155649 iter 90 value 78.953280 iter 100 value 78.849694 final value 78.849694 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 112.601342 iter 10 value 94.537035 iter 20 value 88.239784 iter 30 value 84.354749 iter 40 value 81.784296 iter 50 value 79.977020 iter 60 value 78.859451 iter 70 value 78.365952 iter 80 value 77.992224 iter 90 value 77.878984 iter 100 value 77.757819 final value 77.757819 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 117.128444 iter 10 value 88.099224 iter 20 value 85.693724 iter 30 value 82.379785 iter 40 value 80.068718 iter 50 value 79.586654 iter 60 value 79.044859 iter 70 value 78.908696 iter 80 value 78.649804 iter 90 value 78.307503 iter 100 value 78.131621 final value 78.131621 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 100.744230 iter 10 value 94.054797 final value 94.052985 converged Fitting Repeat 2 # weights: 103 initial value 96.935083 final value 94.054523 converged Fitting Repeat 3 # weights: 103 initial value 105.599617 iter 10 value 93.838028 iter 20 value 93.836647 iter 30 value 90.852539 iter 40 value 83.445958 iter 50 value 83.429837 final value 83.429767 converged Fitting Repeat 4 # weights: 103 initial value 107.507203 final value 94.054320 converged Fitting Repeat 5 # weights: 103 initial value 103.003741 final value 94.054602 converged Fitting Repeat 1 # weights: 305 initial value 95.990454 iter 10 value 94.068999 iter 20 value 94.062354 iter 30 value 93.716643 iter 40 value 93.693530 iter 50 value 93.690318 iter 60 value 93.689698 iter 70 value 93.686011 iter 80 value 93.684804 final value 93.683285 converged Fitting Repeat 2 # weights: 305 initial value 97.023599 iter 10 value 94.057076 iter 20 value 91.071374 iter 30 value 90.395935 iter 40 value 90.378491 iter 40 value 90.378490 iter 40 value 90.378490 final value 90.378490 converged Fitting Repeat 3 # weights: 305 initial value 120.279332 iter 10 value 93.898616 iter 20 value 93.879314 iter 30 value 93.801095 iter 40 value 93.800131 iter 50 value 93.433363 iter 60 value 91.693424 iter 70 value 91.194708 final value 91.191071 converged Fitting Repeat 4 # weights: 305 initial value 101.384060 iter 10 value 94.057060 iter 20 value 94.052923 iter 20 value 94.052923 iter 20 value 94.052923 final value 94.052923 converged Fitting Repeat 5 # weights: 305 initial value 98.345125 iter 10 value 94.057802 iter 20 value 94.052934 iter 30 value 88.534898 iter 40 value 87.098178 iter 50 value 87.063666 iter 60 value 86.787176 iter 70 value 86.756140 iter 70 value 86.756139 final value 86.756139 converged Fitting Repeat 1 # weights: 507 initial value 112.784358 iter 10 value 93.613880 iter 20 value 87.374659 iter 30 value 85.478777 iter 40 value 85.358557 iter 50 value 85.355594 iter 60 value 84.628517 iter 70 value 83.426926 iter 80 value 82.053557 iter 90 value 81.852348 iter 100 value 81.835482 final value 81.835482 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 126.061015 iter 10 value 93.844533 iter 20 value 93.787935 iter 30 value 85.307142 iter 40 value 84.988248 iter 50 value 84.962177 iter 60 value 84.376046 iter 70 value 82.570635 iter 80 value 82.511592 iter 90 value 82.496138 iter 100 value 80.552215 final value 80.552215 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 102.365930 iter 10 value 93.586470 iter 20 value 90.051200 iter 30 value 89.042635 iter 40 value 87.842139 iter 50 value 84.923616 iter 60 value 83.966193 iter 70 value 83.602247 iter 80 value 83.002052 iter 90 value 78.937644 iter 100 value 78.739930 final value 78.739930 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 102.118992 iter 10 value 93.884870 iter 20 value 93.523086 iter 30 value 91.198412 iter 40 value 90.435715 iter 50 value 90.435488 iter 60 value 90.432619 final value 90.432582 converged Fitting Repeat 5 # weights: 507 initial value 96.984070 iter 10 value 94.059853 iter 20 value 94.051429 iter 30 value 92.604182 iter 40 value 90.420211 iter 50 value 90.033577 iter 60 value 84.417882 iter 70 value 83.986802 iter 80 value 82.515872 iter 90 value 82.025548 iter 100 value 81.945953 final value 81.945953 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 98.059150 iter 10 value 94.105263 iter 10 value 94.105263 iter 10 value 94.105263 final value 94.105263 converged Fitting Repeat 2 # weights: 103 initial value 109.029990 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 106.581635 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 98.098617 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 101.853068 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 116.909580 final value 94.467391 converged Fitting Repeat 2 # weights: 305 initial value 94.763407 final value 94.484211 converged Fitting Repeat 3 # weights: 305 initial value 111.261735 final value 94.484211 converged Fitting Repeat 4 # weights: 305 initial value 97.029408 final value 94.484211 converged Fitting Repeat 5 # weights: 305 initial value 103.267469 final value 94.484211 converged Fitting Repeat 1 # weights: 507 initial value 110.172125 final value 94.484211 converged Fitting Repeat 2 # weights: 507 initial value 113.994398 final value 94.467391 converged Fitting Repeat 3 # weights: 507 initial value 110.032478 iter 10 value 94.352794 iter 20 value 93.946518 iter 30 value 93.930701 final value 93.930686 converged Fitting Repeat 4 # weights: 507 initial value 96.779536 iter 10 value 93.623396 final value 93.592492 converged Fitting Repeat 5 # weights: 507 initial value 98.892108 iter 10 value 94.378797 final value 94.378788 converged Fitting Repeat 1 # weights: 103 initial value 97.219843 iter 10 value 93.927945 iter 20 value 88.008281 iter 30 value 87.119234 iter 40 value 86.084597 iter 50 value 85.808548 iter 60 value 85.699029 iter 70 value 85.674392 iter 80 value 85.653127 final value 85.649140 converged Fitting Repeat 2 # weights: 103 initial value 97.831448 iter 10 value 94.489034 iter 20 value 94.484249 iter 30 value 94.146056 iter 40 value 93.324489 iter 50 value 93.250722 iter 60 value 93.203282 iter 70 value 92.578541 iter 80 value 92.549422 iter 90 value 92.542446 final value 92.542337 converged Fitting Repeat 3 # weights: 103 initial value 107.929219 iter 10 value 94.832325 iter 20 value 94.460955 iter 30 value 92.854892 iter 40 value 88.819441 iter 50 value 86.065861 iter 60 value 85.691768 iter 70 value 85.567518 iter 80 value 85.545467 final value 85.545417 converged Fitting Repeat 4 # weights: 103 initial value 100.859070 iter 10 value 93.975113 iter 20 value 87.485324 iter 30 value 87.147637 iter 40 value 87.031021 iter 50 value 86.918790 iter 60 value 85.995904 final value 85.994140 converged Fitting Repeat 5 # weights: 103 initial value 103.824876 iter 10 value 94.450986 iter 20 value 93.276960 iter 30 value 93.076235 iter 40 value 92.767112 iter 50 value 92.608176 final value 92.608015 converged Fitting Repeat 1 # weights: 305 initial value 108.844600 iter 10 value 93.739600 iter 20 value 89.785942 iter 30 value 88.019016 iter 40 value 86.860918 iter 50 value 86.189710 iter 60 value 85.553107 iter 70 value 84.314852 iter 80 value 82.904987 iter 90 value 82.425287 iter 100 value 82.185927 final value 82.185927 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 114.557388 iter 10 value 94.248866 iter 20 value 88.257226 iter 30 value 85.675826 iter 40 value 83.949399 iter 50 value 83.327404 iter 60 value 82.937727 iter 70 value 82.879088 iter 80 value 82.818694 iter 90 value 82.706228 iter 100 value 82.536962 final value 82.536962 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 118.212312 iter 10 value 94.892421 iter 20 value 88.900244 iter 30 value 86.851437 iter 40 value 86.680072 iter 50 value 86.531132 iter 60 value 85.659835 iter 70 value 83.803183 iter 80 value 82.858779 iter 90 value 82.517949 iter 100 value 82.506258 final value 82.506258 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 105.163990 iter 10 value 94.488623 iter 20 value 91.021995 iter 30 value 89.314049 iter 40 value 87.902934 iter 50 value 86.726434 iter 60 value 83.574301 iter 70 value 82.627422 iter 80 value 82.220368 iter 90 value 82.064957 iter 100 value 82.009728 final value 82.009728 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 99.319797 iter 10 value 94.480718 iter 20 value 90.474196 iter 30 value 85.229978 iter 40 value 83.642024 iter 50 value 83.342995 iter 60 value 82.993002 iter 70 value 82.783399 iter 80 value 82.646824 iter 90 value 82.614642 iter 100 value 82.535113 final value 82.535113 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 116.222453 iter 10 value 95.239550 iter 20 value 91.622819 iter 30 value 88.580574 iter 40 value 86.879372 iter 50 value 85.060583 iter 60 value 83.483299 iter 70 value 82.816828 iter 80 value 82.027432 iter 90 value 81.626925 iter 100 value 81.505022 final value 81.505022 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 108.279800 iter 10 value 94.962750 iter 20 value 94.480515 iter 30 value 94.451559 iter 40 value 92.467925 iter 50 value 87.048590 iter 60 value 84.483656 iter 70 value 84.273385 iter 80 value 83.909228 iter 90 value 82.438782 iter 100 value 82.161166 final value 82.161166 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 129.610412 iter 10 value 94.503196 iter 20 value 87.796168 iter 30 value 86.628023 iter 40 value 83.895131 iter 50 value 83.334077 iter 60 value 82.838212 iter 70 value 82.505657 iter 80 value 82.140370 iter 90 value 81.730862 iter 100 value 81.497885 final value 81.497885 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 122.116021 iter 10 value 94.600126 iter 20 value 89.365842 iter 30 value 87.579774 iter 40 value 86.446259 iter 50 value 86.022249 iter 60 value 85.913589 iter 70 value 85.841394 iter 80 value 85.737312 iter 90 value 85.654642 iter 100 value 85.542172 final value 85.542172 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 103.289772 iter 10 value 94.489135 iter 20 value 91.050199 iter 30 value 84.118908 iter 40 value 83.844691 iter 50 value 83.274430 iter 60 value 82.911906 iter 70 value 82.636557 iter 80 value 82.488922 iter 90 value 82.425020 iter 100 value 82.177429 final value 82.177429 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 95.544161 final value 94.485971 converged Fitting Repeat 2 # weights: 103 initial value 94.672415 final value 94.485873 converged Fitting Repeat 3 # weights: 103 initial value 95.991129 final value 94.488133 converged Fitting Repeat 4 # weights: 103 initial value 99.491311 final value 94.485645 converged Fitting Repeat 5 # weights: 103 initial value 100.354519 final value 94.485907 converged Fitting Repeat 1 # weights: 305 initial value 95.431624 iter 10 value 94.484698 iter 20 value 86.698053 iter 30 value 86.555148 iter 40 value 86.374649 iter 50 value 86.252736 iter 60 value 86.238285 iter 70 value 86.169185 iter 80 value 86.021351 iter 90 value 84.369441 iter 100 value 84.253041 final value 84.253041 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 99.157943 iter 10 value 94.488328 iter 20 value 93.057566 iter 30 value 91.115636 iter 40 value 91.100417 iter 50 value 90.116535 iter 60 value 90.078128 final value 90.077088 converged Fitting Repeat 3 # weights: 305 initial value 96.118869 iter 10 value 94.487833 iter 20 value 94.472602 iter 30 value 91.223883 iter 40 value 89.996364 iter 50 value 85.087528 iter 60 value 85.083612 iter 70 value 84.707416 iter 80 value 82.629073 iter 90 value 82.275918 iter 100 value 82.270943 final value 82.270943 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 101.321612 iter 10 value 94.327559 iter 20 value 94.322287 iter 30 value 90.367829 iter 40 value 87.915695 iter 50 value 86.509473 iter 60 value 85.758785 iter 70 value 82.764682 iter 80 value 81.986518 iter 90 value 81.719531 iter 100 value 81.719157 final value 81.719157 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 106.480440 iter 10 value 94.488796 iter 20 value 91.759474 iter 30 value 87.335103 iter 40 value 87.334592 final value 87.334552 converged Fitting Repeat 1 # weights: 507 initial value 102.311551 iter 10 value 92.603534 iter 20 value 87.237975 iter 30 value 87.236869 iter 40 value 87.234198 iter 50 value 86.414028 iter 60 value 86.378814 iter 70 value 86.378083 iter 80 value 86.377659 final value 86.376963 converged Fitting Repeat 2 # weights: 507 initial value 111.648435 iter 10 value 94.493215 iter 20 value 94.476892 iter 30 value 94.474974 iter 40 value 94.467585 iter 50 value 87.967704 iter 60 value 87.885145 iter 70 value 87.782150 iter 80 value 87.374379 iter 90 value 87.270963 iter 100 value 83.608317 final value 83.608317 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 98.618806 iter 10 value 94.497806 iter 20 value 94.480379 iter 30 value 94.470205 iter 40 value 94.333642 iter 50 value 92.080383 iter 60 value 84.789651 iter 70 value 84.358072 iter 80 value 84.356516 iter 90 value 84.191477 iter 90 value 84.191477 iter 100 value 83.141944 final value 83.141944 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 96.515916 iter 10 value 94.491629 iter 20 value 94.481450 iter 30 value 88.592558 iter 40 value 87.860591 iter 50 value 83.782231 iter 60 value 81.247321 iter 70 value 80.917390 iter 80 value 80.864864 iter 90 value 80.286733 iter 100 value 80.139522 final value 80.139522 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 100.128347 iter 10 value 94.492490 iter 20 value 94.477087 final value 94.467696 converged Fitting Repeat 1 # weights: 507 initial value 132.270430 iter 10 value 117.898335 iter 20 value 117.865324 iter 30 value 116.370403 iter 40 value 106.966203 iter 50 value 106.828636 iter 60 value 106.806706 final value 106.806354 converged Fitting Repeat 2 # weights: 507 initial value 150.719289 iter 10 value 117.900913 iter 20 value 117.892718 iter 30 value 110.505350 iter 40 value 108.530948 iter 50 value 108.528046 iter 60 value 107.187139 final value 107.182013 converged Fitting Repeat 3 # weights: 507 initial value 132.624980 iter 10 value 117.589177 iter 20 value 117.564381 iter 30 value 117.561728 iter 40 value 117.560769 iter 50 value 112.614675 iter 60 value 111.660555 iter 70 value 111.643347 iter 80 value 111.642181 iter 90 value 110.742050 iter 100 value 110.423916 final value 110.423916 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 137.054228 iter 10 value 117.508258 iter 20 value 117.503380 iter 30 value 117.500972 final value 117.500653 converged Fitting Repeat 5 # weights: 507 initial value 158.672148 iter 10 value 117.894508 iter 20 value 117.780818 iter 30 value 117.767232 iter 40 value 117.763848 iter 50 value 117.762297 iter 60 value 117.758956 iter 70 value 117.567170 iter 80 value 107.186101 iter 90 value 107.153323 iter 100 value 106.517789 final value 106.517789 stopped after 100 iterations svmRadial ranger Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases RUNIT TEST PROTOCOL -- Mon Jul 15 23:48:55 2024 *********************************************** Number of test functions: 7 Number of errors: 0 Number of failures: 0 1 Test Suite : HPiP RUnit Tests - 7 test functions, 0 errors, 0 failures Number of test functions: 7 Number of errors: 0 Number of failures: 0 Warning messages: 1: `repeats` has no meaning for this resampling method. 2: executing %dopar% sequentially: no parallel backend registered > > > > > proc.time() user system elapsed 41.338 1.893 42.480
HPiP.Rcheck/HPiP-Ex.timings
name | user | system | elapsed | |
FSmethod | 33.524 | 0.612 | 34.137 | |
FreqInteractors | 0.220 | 0.016 | 0.236 | |
calculateAAC | 0.041 | 0.000 | 0.042 | |
calculateAutocor | 0.285 | 0.023 | 0.309 | |
calculateCTDC | 0.071 | 0.004 | 0.075 | |
calculateCTDD | 0.561 | 0.000 | 0.562 | |
calculateCTDT | 0.236 | 0.000 | 0.237 | |
calculateCTriad | 0.665 | 0.016 | 0.680 | |
calculateDC | 0.086 | 0.004 | 0.090 | |
calculateF | 0.317 | 0.000 | 0.317 | |
calculateKSAAP | 0.088 | 0.004 | 0.092 | |
calculateQD_Sm | 1.564 | 0.028 | 1.591 | |
calculateTC | 1.425 | 0.068 | 1.493 | |
calculateTC_Sm | 0.285 | 0.008 | 0.293 | |
corr_plot | 33.574 | 0.388 | 33.962 | |
enrichfindP | 0.535 | 0.049 | 8.682 | |
enrichfind_hp | 0.115 | 0.004 | 1.037 | |
enrichplot | 0.346 | 0.028 | 0.375 | |
filter_missing_values | 0.001 | 0.000 | 0.001 | |
getFASTA | 0.404 | 0.004 | 4.385 | |
getHPI | 0.001 | 0.000 | 0.000 | |
get_negativePPI | 0.001 | 0.000 | 0.001 | |
get_positivePPI | 0 | 0 | 0 | |
impute_missing_data | 0.002 | 0.000 | 0.001 | |
plotPPI | 0.071 | 0.004 | 0.075 | |
pred_ensembel | 13.356 | 0.578 | 10.709 | |
var_imp | 35.685 | 1.004 | 36.691 | |