Back to Multiple platform build/check report for BioC 3.20: simplified long |
|
This page was generated on 2024-07-16 11:42 -0400 (Tue, 16 Jul 2024).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4677 |
palomino6 | Windows Server 2022 Datacenter | x64 | 4.4.1 (2024-06-14 ucrt) -- "Race for Your Life" | 4416 |
lconway | macOS 12.7.1 Monterey | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4444 |
kjohnson3 | macOS 13.6.5 Ventura | arm64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4393 |
palomino8 | Windows Server 2022 Datacenter | x64 | 4.4.1 (2024-06-14 ucrt) -- "Race for Your Life" | 4373 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
Package 963/2243 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
HPiP 1.11.0 (landing page) Matineh Rahmatbakhsh
| nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | OK | OK | ![]() | ||||||||
palomino6 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | |||||||||
lconway | macOS 12.7.1 Monterey / x86_64 | OK | OK | OK | OK | ![]() | ||||||||
kjohnson3 | macOS 13.6.5 Ventura / arm64 | OK | OK | OK | OK | ![]() | ||||||||
palomino8 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | |||||||||
To the developers/maintainers of the HPiP package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/HPiP.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
Package: HPiP |
Version: 1.11.0 |
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:HPiP.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings HPiP_1.11.0.tar.gz |
StartedAt: 2024-07-15 21:11:02 -0400 (Mon, 15 Jul 2024) |
EndedAt: 2024-07-15 21:16:02 -0400 (Mon, 15 Jul 2024) |
EllapsedTime: 300.2 seconds |
RetCode: 0 |
Status: OK |
CheckDir: HPiP.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:HPiP.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings HPiP_1.11.0.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/Users/biocbuild/bbs-3.20-bioc/meat/HPiP.Rcheck’ * using R version 4.4.1 (2024-06-14) * using platform: x86_64-apple-darwin20 * R was compiled by Apple clang version 14.0.0 (clang-1400.0.29.202) GNU Fortran (GCC) 12.2.0 * running under: macOS Monterey 12.7.1 * using session charset: UTF-8 * using option ‘--no-vignettes’ * checking for file ‘HPiP/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘HPiP’ version ‘1.11.0’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘HPiP’ can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... NOTE License stub is invalid DCF. * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... NOTE checkRd: (-1) getHPI.Rd:29: Lost braces 29 | then the Kronecker product is the code{(pm × qn)} block matrix | ^ * checking Rd metadata ... OK * checking Rd cross-references ... NOTE Package unavailable to check Rd xrefs: ‘ftrCOOL’ * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking R/sysdata.rda ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK Examples with CPU (user + system) or elapsed time > 5s user system elapsed var_imp 37.365 1.734 39.494 FSmethod 35.325 1.639 37.241 corr_plot 35.014 1.595 36.790 pred_ensembel 14.465 0.508 10.923 enrichfindP 0.516 0.067 7.870 * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘runTests.R’ OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking running R code from vignettes ... SKIPPED * checking re-building of vignette outputs ... SKIPPED * checking PDF version of manual ... OK * DONE Status: 3 NOTEs See ‘/Users/biocbuild/bbs-3.20-bioc/meat/HPiP.Rcheck/00check.log’ for details.
HPiP.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL HPiP ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library’ * installing *source* package ‘HPiP’ ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (HPiP)
HPiP.Rcheck/tests/runTests.Rout
R version 4.4.1 (2024-06-14) -- "Race for Your Life" Copyright (C) 2024 The R Foundation for Statistical Computing Platform: x86_64-apple-darwin20 R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > BiocGenerics:::testPackage('HPiP') No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE avNNet Loading required package: ggplot2 Loading required package: lattice Fitting Repeat 1 # weights: 103 initial value 95.031382 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 97.679656 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 109.000491 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 97.432165 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 96.014557 final value 94.052434 converged Fitting Repeat 1 # weights: 305 initial value 96.468727 final value 94.484211 converged Fitting Repeat 2 # weights: 305 initial value 108.118050 final value 94.275362 converged Fitting Repeat 3 # weights: 305 initial value 111.330941 final value 94.275363 converged Fitting Repeat 4 # weights: 305 initial value 109.079459 iter 10 value 94.556665 iter 20 value 94.470306 final value 94.470285 converged Fitting Repeat 5 # weights: 305 initial value 96.076969 iter 10 value 94.212892 iter 20 value 86.700177 iter 30 value 86.293709 iter 40 value 86.281498 final value 86.281482 converged Fitting Repeat 1 # weights: 507 initial value 95.055221 final value 94.275362 converged Fitting Repeat 2 # weights: 507 initial value 102.028821 iter 10 value 92.192205 iter 20 value 85.010253 iter 30 value 84.734987 iter 40 value 84.727273 final value 84.724804 converged Fitting Repeat 3 # weights: 507 initial value 101.812072 final value 94.484211 converged Fitting Repeat 4 # weights: 507 initial value 103.968158 iter 10 value 93.805907 iter 20 value 93.672079 final value 93.671795 converged Fitting Repeat 5 # weights: 507 initial value 96.223229 iter 10 value 94.275371 final value 94.275362 converged Fitting Repeat 1 # weights: 103 initial value 103.169454 iter 10 value 94.553713 iter 20 value 94.473919 iter 30 value 93.809250 iter 40 value 90.667484 iter 50 value 90.010703 iter 60 value 86.001070 iter 70 value 84.634596 iter 80 value 84.209152 iter 90 value 82.997294 iter 100 value 82.781434 final value 82.781434 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 96.797256 iter 10 value 94.476781 iter 20 value 94.138351 iter 30 value 93.825310 iter 40 value 93.638798 iter 50 value 93.051733 iter 60 value 93.037489 iter 70 value 93.031232 final value 93.031184 converged Fitting Repeat 3 # weights: 103 initial value 100.719802 iter 10 value 94.491638 iter 20 value 93.588739 iter 30 value 92.347760 iter 40 value 87.370877 iter 50 value 86.832367 iter 60 value 86.511602 iter 70 value 85.711123 iter 80 value 85.416055 iter 90 value 84.930281 iter 100 value 84.905055 final value 84.905055 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 98.150140 iter 10 value 94.330041 iter 20 value 93.854238 iter 30 value 88.521028 iter 40 value 88.080377 iter 50 value 87.883697 iter 60 value 86.174427 iter 70 value 85.458465 iter 80 value 85.376716 final value 85.375001 converged Fitting Repeat 5 # weights: 103 initial value 108.063212 iter 10 value 94.486808 iter 20 value 94.372011 iter 30 value 87.575792 iter 40 value 86.804122 iter 50 value 85.796644 iter 60 value 85.584828 iter 70 value 85.561416 final value 85.559909 converged Fitting Repeat 1 # weights: 305 initial value 102.113448 iter 10 value 94.407685 iter 20 value 94.081062 iter 30 value 92.423076 iter 40 value 90.041223 iter 50 value 87.136485 iter 60 value 85.429803 iter 70 value 82.368348 iter 80 value 82.048105 iter 90 value 81.776464 iter 100 value 81.235086 final value 81.235086 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 100.332098 iter 10 value 94.497570 iter 20 value 93.340314 iter 30 value 88.577817 iter 40 value 86.614467 iter 50 value 85.629177 iter 60 value 85.466054 iter 70 value 85.262647 iter 80 value 85.071384 iter 90 value 84.432920 iter 100 value 83.602259 final value 83.602259 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 102.022126 iter 10 value 94.578172 iter 20 value 88.409251 iter 30 value 86.368969 iter 40 value 85.772193 iter 50 value 84.205376 iter 60 value 82.694110 iter 70 value 81.742273 iter 80 value 81.629814 iter 90 value 81.446038 iter 100 value 81.394739 final value 81.394739 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 110.088434 iter 10 value 94.296821 iter 20 value 87.276323 iter 30 value 85.667835 iter 40 value 84.734848 iter 50 value 82.694517 iter 60 value 81.976529 iter 70 value 81.709941 iter 80 value 81.482371 iter 90 value 81.358669 iter 100 value 81.099003 final value 81.099003 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 110.560788 iter 10 value 94.088672 iter 20 value 85.192583 iter 30 value 84.453605 iter 40 value 83.321782 iter 50 value 83.080181 iter 60 value 82.665881 iter 70 value 82.609638 iter 80 value 82.446759 iter 90 value 82.359631 iter 100 value 82.299506 final value 82.299506 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 104.486507 iter 10 value 95.259443 iter 20 value 88.391756 iter 30 value 86.601666 iter 40 value 85.525725 iter 50 value 85.124234 iter 60 value 83.575724 iter 70 value 83.279939 iter 80 value 82.595659 iter 90 value 82.551227 iter 100 value 82.150718 final value 82.150718 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 113.943704 iter 10 value 102.283797 iter 20 value 89.568688 iter 30 value 88.431743 iter 40 value 85.732241 iter 50 value 84.899208 iter 60 value 84.719171 iter 70 value 84.671125 iter 80 value 84.521078 iter 90 value 84.174192 iter 100 value 83.376137 final value 83.376137 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 108.822368 iter 10 value 94.417871 iter 20 value 88.642086 iter 30 value 87.043402 iter 40 value 85.996623 iter 50 value 85.428553 iter 60 value 84.253568 iter 70 value 83.285339 iter 80 value 82.860013 iter 90 value 82.139918 iter 100 value 81.899919 final value 81.899919 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 106.901848 iter 10 value 94.411933 iter 20 value 90.423474 iter 30 value 87.856316 iter 40 value 86.781246 iter 50 value 86.324663 iter 60 value 84.652620 iter 70 value 82.897299 iter 80 value 82.066285 iter 90 value 81.054144 iter 100 value 80.630781 final value 80.630781 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 111.083050 iter 10 value 95.266631 iter 20 value 92.929671 iter 30 value 89.968885 iter 40 value 85.131776 iter 50 value 83.883808 iter 60 value 83.267988 iter 70 value 82.686337 iter 80 value 81.811348 iter 90 value 81.410958 iter 100 value 81.288622 final value 81.288622 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 100.588796 final value 94.148969 converged Fitting Repeat 2 # weights: 103 initial value 110.255008 final value 94.485615 converged Fitting Repeat 3 # weights: 103 initial value 97.200343 final value 94.486184 converged Fitting Repeat 4 # weights: 103 initial value 102.394985 final value 94.485580 converged Fitting Repeat 5 # weights: 103 initial value 102.069866 final value 94.485722 converged Fitting Repeat 1 # weights: 305 initial value 120.005732 iter 10 value 94.488877 iter 20 value 94.378770 iter 30 value 94.042743 iter 40 value 87.722653 iter 50 value 86.940488 iter 60 value 86.086192 iter 70 value 85.727760 iter 80 value 85.726626 final value 85.726621 converged Fitting Repeat 2 # weights: 305 initial value 109.390851 iter 10 value 94.280623 iter 20 value 94.276398 iter 30 value 94.275515 iter 30 value 94.275514 final value 94.275514 converged Fitting Repeat 3 # weights: 305 initial value 95.151424 iter 10 value 94.280226 iter 20 value 94.275637 iter 30 value 88.295699 iter 40 value 86.690231 iter 50 value 84.876822 iter 60 value 84.875354 iter 70 value 84.875176 iter 80 value 84.749168 iter 90 value 84.600740 final value 84.600602 converged Fitting Repeat 4 # weights: 305 initial value 100.451129 iter 10 value 94.488822 iter 20 value 94.439680 iter 30 value 89.662181 iter 40 value 84.345139 iter 50 value 84.320367 iter 60 value 84.316505 iter 70 value 84.019986 iter 80 value 83.753921 iter 90 value 83.316427 iter 100 value 83.116734 final value 83.116734 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 98.111771 iter 10 value 94.488854 iter 20 value 91.834267 iter 30 value 84.474161 iter 40 value 83.904509 final value 83.902268 converged Fitting Repeat 1 # weights: 507 initial value 97.406565 iter 10 value 94.492387 iter 20 value 94.424913 iter 30 value 90.387674 iter 40 value 86.446931 iter 50 value 84.657143 iter 60 value 83.707978 iter 70 value 81.477967 iter 80 value 80.367673 iter 90 value 79.872400 iter 100 value 79.684274 final value 79.684274 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 103.068165 iter 10 value 86.434248 iter 20 value 86.125243 iter 30 value 86.115369 iter 40 value 85.564384 iter 50 value 85.449728 iter 60 value 85.447827 iter 70 value 85.445693 iter 80 value 85.444031 iter 90 value 85.443644 iter 100 value 85.443288 final value 85.443288 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 97.678997 iter 10 value 93.840373 iter 20 value 93.825428 iter 30 value 93.817034 iter 40 value 87.957413 iter 50 value 83.764909 iter 60 value 83.022234 iter 70 value 82.838474 iter 80 value 82.411554 iter 90 value 82.365823 iter 100 value 82.285064 final value 82.285064 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 131.846107 iter 10 value 94.283981 iter 20 value 94.276663 final value 94.275655 converged Fitting Repeat 5 # weights: 507 initial value 130.844769 iter 10 value 94.492006 iter 20 value 94.484655 iter 30 value 94.458298 iter 40 value 88.174716 iter 50 value 87.829942 iter 60 value 87.709443 iter 70 value 85.954682 iter 80 value 84.714192 iter 90 value 83.864474 final value 83.766752 converged Fitting Repeat 1 # weights: 103 initial value 96.736962 final value 94.052910 converged Fitting Repeat 2 # weights: 103 initial value 94.651454 final value 94.052910 converged Fitting Repeat 3 # weights: 103 initial value 95.148220 final value 94.052910 converged Fitting Repeat 4 # weights: 103 initial value 96.129983 final value 94.052910 converged Fitting Repeat 5 # weights: 103 initial value 110.350240 final value 94.052910 converged Fitting Repeat 1 # weights: 305 initial value 98.565305 final value 94.052910 converged Fitting Repeat 2 # weights: 305 initial value 103.504904 iter 10 value 94.010688 final value 94.008696 converged Fitting Repeat 3 # weights: 305 initial value 107.951683 final value 94.052910 converged Fitting Repeat 4 # weights: 305 initial value 93.922155 iter 10 value 91.610437 iter 20 value 90.760527 iter 20 value 90.760527 iter 20 value 90.760526 final value 90.760526 converged Fitting Repeat 5 # weights: 305 initial value 94.125958 final value 94.052910 converged Fitting Repeat 1 # weights: 507 initial value 96.459810 final value 93.671508 converged Fitting Repeat 2 # weights: 507 initial value 106.051928 final value 94.052910 converged Fitting Repeat 3 # weights: 507 initial value 95.048606 final value 94.052910 converged Fitting Repeat 4 # weights: 507 initial value 99.925099 iter 10 value 94.035089 final value 94.035088 converged Fitting Repeat 5 # weights: 507 initial value 95.667145 final value 94.038252 converged Fitting Repeat 1 # weights: 103 initial value 99.219311 iter 10 value 91.116750 iter 20 value 86.350587 iter 30 value 86.159889 iter 40 value 84.934955 iter 50 value 83.938448 iter 60 value 83.636983 iter 70 value 83.595825 iter 80 value 83.442583 final value 83.440206 converged Fitting Repeat 2 # weights: 103 initial value 116.615677 iter 10 value 93.499643 iter 20 value 90.455110 iter 30 value 87.357412 iter 40 value 86.747360 iter 50 value 86.484673 iter 60 value 84.265589 iter 70 value 83.479748 iter 80 value 83.464460 iter 90 value 83.440533 final value 83.440071 converged Fitting Repeat 3 # weights: 103 initial value 104.071739 iter 10 value 93.944889 iter 20 value 92.567460 iter 30 value 91.145173 iter 40 value 91.082386 iter 50 value 90.208704 iter 60 value 88.456267 iter 70 value 88.302146 iter 80 value 84.295868 iter 90 value 82.900698 iter 100 value 82.585712 final value 82.585712 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 108.135613 iter 10 value 94.069097 iter 20 value 93.970715 iter 30 value 90.929675 iter 40 value 89.403440 iter 50 value 89.123329 iter 60 value 88.247030 iter 70 value 87.654978 iter 80 value 84.320750 iter 90 value 83.695842 iter 100 value 83.499090 final value 83.499090 stopped after 100 iterations Fitting Repeat 5 # weights: 103 initial value 107.568570 iter 10 value 94.002047 iter 20 value 92.246830 iter 30 value 91.858871 iter 40 value 91.630930 iter 50 value 91.610784 iter 60 value 88.606781 iter 70 value 88.223758 iter 80 value 87.664767 iter 90 value 87.288270 iter 100 value 86.603598 final value 86.603598 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 101.575494 iter 10 value 93.850911 iter 20 value 88.628194 iter 30 value 87.650711 iter 40 value 84.312715 iter 50 value 83.112957 iter 60 value 82.735179 iter 70 value 81.931458 iter 80 value 80.858898 iter 90 value 80.417083 iter 100 value 80.299315 final value 80.299315 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 100.496389 iter 10 value 94.375222 iter 20 value 92.213569 iter 30 value 88.220675 iter 40 value 84.880822 iter 50 value 83.733624 iter 60 value 82.548734 iter 70 value 82.117813 iter 80 value 81.605733 iter 90 value 80.373218 iter 100 value 80.110264 final value 80.110264 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 106.492060 iter 10 value 94.099129 iter 20 value 94.055131 iter 30 value 93.927003 iter 40 value 91.811650 iter 50 value 88.126895 iter 60 value 87.703910 iter 70 value 87.051681 iter 80 value 84.873322 iter 90 value 84.068901 iter 100 value 83.953041 final value 83.953041 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 112.774034 iter 10 value 94.326417 iter 20 value 94.039106 iter 30 value 90.574234 iter 40 value 89.985108 iter 50 value 86.256299 iter 60 value 83.209980 iter 70 value 82.929709 iter 80 value 82.746733 iter 90 value 82.697962 iter 100 value 82.656562 final value 82.656562 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 113.109075 iter 10 value 95.124189 iter 20 value 92.863325 iter 30 value 87.704959 iter 40 value 85.740692 iter 50 value 84.162334 iter 60 value 82.604749 iter 70 value 80.841387 iter 80 value 80.563068 iter 90 value 80.428561 iter 100 value 79.962233 final value 79.962233 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 107.706683 iter 10 value 94.079634 iter 20 value 88.104978 iter 30 value 86.752011 iter 40 value 84.961908 iter 50 value 82.537143 iter 60 value 82.216171 iter 70 value 81.368764 iter 80 value 81.084909 iter 90 value 80.837947 iter 100 value 80.340091 final value 80.340091 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 107.087212 iter 10 value 93.914041 iter 20 value 92.158779 iter 30 value 89.646852 iter 40 value 86.844164 iter 50 value 84.360672 iter 60 value 83.844949 iter 70 value 83.045868 iter 80 value 81.566807 iter 90 value 80.853249 iter 100 value 80.773038 final value 80.773038 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 112.343474 iter 10 value 94.356094 iter 20 value 90.914755 iter 30 value 88.230764 iter 40 value 83.731902 iter 50 value 82.075579 iter 60 value 81.514696 iter 70 value 80.272030 iter 80 value 79.810400 iter 90 value 79.647222 iter 100 value 79.454489 final value 79.454489 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 106.071155 iter 10 value 94.187905 iter 20 value 94.089643 iter 30 value 93.816181 iter 40 value 89.303141 iter 50 value 87.574247 iter 60 value 86.952286 iter 70 value 86.457865 iter 80 value 86.079310 iter 90 value 85.347409 iter 100 value 84.265984 final value 84.265984 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 115.358799 iter 10 value 95.194500 iter 20 value 93.927622 iter 30 value 89.360413 iter 40 value 88.568559 iter 50 value 87.374256 iter 60 value 86.812716 iter 70 value 86.663177 iter 80 value 85.043402 iter 90 value 82.171750 iter 100 value 80.995750 final value 80.995750 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 99.048277 final value 94.054326 converged Fitting Repeat 2 # weights: 103 initial value 107.845359 final value 94.054325 converged Fitting Repeat 3 # weights: 103 initial value 98.003507 final value 94.054419 converged Fitting Repeat 4 # weights: 103 initial value 109.444086 final value 94.054740 converged Fitting Repeat 5 # weights: 103 initial value 97.588785 final value 94.054611 converged Fitting Repeat 1 # weights: 305 initial value 95.025509 iter 10 value 94.053194 iter 20 value 87.096230 iter 30 value 85.880142 iter 40 value 83.736047 iter 50 value 82.296975 iter 60 value 80.113191 iter 70 value 78.097309 iter 80 value 77.776822 iter 90 value 77.747086 iter 100 value 77.705041 final value 77.705041 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 102.848236 iter 10 value 94.057357 iter 20 value 94.041670 iter 30 value 94.039258 final value 94.039210 converged Fitting Repeat 3 # weights: 305 initial value 97.487897 iter 10 value 94.057039 iter 20 value 94.055605 iter 30 value 94.052377 iter 40 value 94.051108 final value 94.051021 converged Fitting Repeat 4 # weights: 305 initial value 94.973969 iter 10 value 94.057349 iter 20 value 94.052917 iter 30 value 93.422604 iter 40 value 85.527589 iter 50 value 85.432960 iter 60 value 85.432557 iter 70 value 85.424790 iter 80 value 83.832599 iter 90 value 82.366647 iter 100 value 82.208984 final value 82.208984 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 95.998858 iter 10 value 94.058297 iter 20 value 94.053249 iter 30 value 87.580076 iter 40 value 87.250643 iter 50 value 87.214407 iter 60 value 87.213498 iter 70 value 86.505913 iter 80 value 83.551740 iter 90 value 83.526862 iter 100 value 83.330309 final value 83.330309 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 122.691208 iter 10 value 94.047176 iter 20 value 94.039862 iter 30 value 91.264362 iter 40 value 86.144872 final value 86.087395 converged Fitting Repeat 2 # weights: 507 initial value 95.193413 iter 10 value 87.538811 iter 20 value 87.039092 iter 30 value 87.034488 final value 87.031497 converged Fitting Repeat 3 # weights: 507 initial value 101.169193 iter 10 value 94.046227 iter 20 value 94.038473 iter 30 value 86.388849 iter 40 value 86.016269 final value 86.012894 converged Fitting Repeat 4 # weights: 507 initial value 112.533679 iter 10 value 93.251810 iter 20 value 93.238574 iter 30 value 93.238068 iter 40 value 93.054856 iter 50 value 93.054296 iter 60 value 92.959640 iter 70 value 92.731290 iter 80 value 92.731020 iter 90 value 92.623770 iter 100 value 86.314978 final value 86.314978 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 100.745433 iter 10 value 94.047116 iter 20 value 94.037151 iter 30 value 94.034709 iter 40 value 86.294160 iter 50 value 84.645184 iter 60 value 81.149065 iter 70 value 80.780849 iter 80 value 80.702716 iter 90 value 80.702243 iter 100 value 80.699950 final value 80.699950 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 95.850384 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 104.699621 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 102.361913 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 101.889986 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 103.660516 final value 94.466823 converged Fitting Repeat 1 # weights: 305 initial value 98.642005 final value 94.484211 converged Fitting Repeat 2 # weights: 305 initial value 97.266930 final value 94.484211 converged Fitting Repeat 3 # weights: 305 initial value 108.416203 final value 94.484211 converged Fitting Repeat 4 # weights: 305 initial value 106.211607 final value 94.466823 converged Fitting Repeat 5 # weights: 305 initial value 120.600888 final value 94.484211 converged Fitting Repeat 1 # weights: 507 initial value 102.635110 final value 94.466823 converged Fitting Repeat 2 # weights: 507 initial value 106.087008 iter 10 value 94.484021 iter 20 value 94.468558 final value 94.466823 converged Fitting Repeat 3 # weights: 507 initial value 100.578646 final value 94.442072 converged Fitting Repeat 4 # weights: 507 initial value 101.016274 final value 94.466823 converged Fitting Repeat 5 # weights: 507 initial value 100.177723 final value 94.484211 converged Fitting Repeat 1 # weights: 103 initial value 115.627372 iter 10 value 94.490459 iter 20 value 94.375488 iter 30 value 91.296485 iter 40 value 88.381295 iter 50 value 85.205545 iter 60 value 82.429170 iter 70 value 82.150023 iter 80 value 82.141800 final value 82.141798 converged Fitting Repeat 2 # weights: 103 initial value 97.932889 iter 10 value 94.488634 iter 20 value 94.175238 iter 30 value 94.025024 iter 40 value 93.799274 iter 50 value 91.354853 iter 60 value 85.741374 iter 70 value 84.683474 iter 80 value 84.342639 iter 90 value 82.718227 iter 100 value 82.439835 final value 82.439835 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 103.518200 iter 10 value 94.346443 iter 20 value 92.591888 iter 30 value 92.362615 iter 40 value 92.238757 iter 50 value 86.426592 iter 60 value 84.542377 iter 70 value 84.346639 iter 80 value 82.413804 iter 90 value 82.353131 iter 100 value 82.350714 final value 82.350714 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 103.376862 iter 10 value 94.511533 iter 20 value 93.975304 iter 30 value 85.185641 iter 40 value 84.733501 iter 50 value 82.742264 iter 60 value 82.155575 iter 70 value 82.141839 final value 82.141795 converged Fitting Repeat 5 # weights: 103 initial value 100.727704 iter 10 value 94.165054 iter 20 value 87.333683 iter 30 value 81.392462 iter 40 value 80.451414 iter 50 value 80.100988 iter 60 value 80.028108 iter 70 value 79.946431 iter 80 value 79.873989 iter 90 value 79.866891 iter 90 value 79.866891 iter 90 value 79.866891 final value 79.866891 converged Fitting Repeat 1 # weights: 305 initial value 103.275749 iter 10 value 94.384372 iter 20 value 82.962276 iter 30 value 82.586138 iter 40 value 82.162182 iter 50 value 81.928643 iter 60 value 81.709343 iter 70 value 81.530369 iter 80 value 80.805844 iter 90 value 79.808482 iter 100 value 79.667810 final value 79.667810 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 103.483483 iter 10 value 87.349494 iter 20 value 82.825221 iter 30 value 81.700657 iter 40 value 80.726908 iter 50 value 80.246178 iter 60 value 79.807337 iter 70 value 78.958643 iter 80 value 78.600347 iter 90 value 78.575206 iter 100 value 78.528779 final value 78.528779 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 134.834483 iter 10 value 94.365595 iter 20 value 85.247922 iter 30 value 84.267754 iter 40 value 83.338067 iter 50 value 82.112754 iter 60 value 81.032496 iter 70 value 80.661337 iter 80 value 80.521683 iter 90 value 80.438755 iter 100 value 80.365768 final value 80.365768 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 110.931585 iter 10 value 94.779180 iter 20 value 87.735123 iter 30 value 83.877231 iter 40 value 80.916758 iter 50 value 80.780886 iter 60 value 80.695425 iter 70 value 80.606787 iter 80 value 80.531524 iter 90 value 80.462413 iter 100 value 80.396319 final value 80.396319 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 100.154038 iter 10 value 94.611887 iter 20 value 94.084266 iter 30 value 85.224754 iter 40 value 81.347398 iter 50 value 80.971146 iter 60 value 80.267316 iter 70 value 79.897845 iter 80 value 79.510194 iter 90 value 79.274242 iter 100 value 79.231775 final value 79.231775 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 116.206327 iter 10 value 94.339539 iter 20 value 90.361108 iter 30 value 89.554065 iter 40 value 85.701883 iter 50 value 85.206216 iter 60 value 83.826909 iter 70 value 81.837704 iter 80 value 81.370269 iter 90 value 80.829967 iter 100 value 80.557948 final value 80.557948 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 103.961764 iter 10 value 93.412902 iter 20 value 83.423391 iter 30 value 82.764905 iter 40 value 81.460089 iter 50 value 80.743683 iter 60 value 80.326119 iter 70 value 79.850287 iter 80 value 79.565849 iter 90 value 78.954269 iter 100 value 78.801534 final value 78.801534 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 133.597410 iter 10 value 94.571602 iter 20 value 93.903319 iter 30 value 84.608897 iter 40 value 83.261398 iter 50 value 81.182839 iter 60 value 80.052793 iter 70 value 79.790402 iter 80 value 79.638431 iter 90 value 79.521171 iter 100 value 79.292814 final value 79.292814 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 123.638802 iter 10 value 94.434251 iter 20 value 89.091206 iter 30 value 87.146072 iter 40 value 82.343218 iter 50 value 81.113912 iter 60 value 80.693785 iter 70 value 79.550440 iter 80 value 78.972228 iter 90 value 78.721651 iter 100 value 78.662704 final value 78.662704 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 106.047769 iter 10 value 95.437262 iter 20 value 94.384763 iter 30 value 89.006945 iter 40 value 87.135123 iter 50 value 82.900426 iter 60 value 82.261313 iter 70 value 80.288268 iter 80 value 79.672191 iter 90 value 79.411864 iter 100 value 78.867952 final value 78.867952 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 99.918720 iter 10 value 94.485864 iter 20 value 94.484251 iter 30 value 93.300678 final value 93.300604 converged Fitting Repeat 2 # weights: 103 initial value 98.855020 final value 94.485752 converged Fitting Repeat 3 # weights: 103 initial value 95.028375 final value 94.486046 converged Fitting Repeat 4 # weights: 103 initial value 95.641996 final value 94.485839 converged Fitting Repeat 5 # weights: 103 initial value 95.573733 final value 94.485638 converged Fitting Repeat 1 # weights: 305 initial value 103.889960 iter 10 value 94.489758 iter 20 value 94.424456 iter 30 value 93.882253 iter 40 value 91.394389 iter 50 value 91.389746 iter 60 value 91.387656 iter 70 value 91.384617 iter 80 value 91.360260 iter 90 value 91.324457 iter 100 value 91.323436 final value 91.323436 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 101.004510 iter 10 value 94.488400 iter 20 value 85.160004 iter 30 value 83.944631 iter 40 value 83.941936 iter 40 value 83.941936 iter 40 value 83.941936 final value 83.941936 converged Fitting Repeat 3 # weights: 305 initial value 97.101186 iter 10 value 94.487786 iter 20 value 93.644074 iter 30 value 83.859264 iter 40 value 81.234557 iter 50 value 81.056315 iter 60 value 81.053744 iter 70 value 81.053589 iter 80 value 81.052610 iter 90 value 80.957031 iter 100 value 80.241425 final value 80.241425 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 98.201421 iter 10 value 94.489056 iter 20 value 92.225223 iter 30 value 85.483599 iter 40 value 85.244170 iter 50 value 84.458177 iter 60 value 84.229158 iter 70 value 84.209365 iter 80 value 84.208788 iter 90 value 84.206992 final value 84.206612 converged Fitting Repeat 5 # weights: 305 initial value 104.032546 iter 10 value 94.489119 iter 20 value 94.484225 final value 94.484217 converged Fitting Repeat 1 # weights: 507 initial value 123.647007 iter 10 value 94.492035 iter 20 value 94.472052 iter 30 value 90.816458 iter 40 value 88.682283 iter 50 value 87.381475 iter 60 value 84.872552 iter 70 value 84.579258 iter 80 value 84.126720 iter 90 value 83.822582 iter 100 value 83.812650 final value 83.812650 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 116.711142 iter 10 value 94.491919 iter 20 value 94.476345 iter 30 value 94.466803 final value 94.466745 converged Fitting Repeat 3 # weights: 507 initial value 96.858121 iter 10 value 94.492286 iter 20 value 94.408005 iter 30 value 93.183739 iter 40 value 88.324126 iter 50 value 87.227945 iter 60 value 85.207774 iter 70 value 84.432313 iter 80 value 84.432223 iter 90 value 82.841535 iter 100 value 80.026784 final value 80.026784 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 127.854533 iter 10 value 94.492333 iter 20 value 94.463848 iter 30 value 93.300620 iter 30 value 93.300620 iter 30 value 93.300620 final value 93.300620 converged Fitting Repeat 5 # weights: 507 initial value 97.712598 iter 10 value 94.492478 iter 20 value 94.476989 iter 30 value 84.419444 iter 40 value 84.416509 iter 50 value 84.207373 iter 60 value 84.188749 final value 84.188347 converged Fitting Repeat 1 # weights: 103 initial value 97.385510 final value 94.052910 converged Fitting Repeat 2 # weights: 103 initial value 97.840410 final value 94.052910 converged Fitting Repeat 3 # weights: 103 initial value 96.003001 final value 94.052910 converged Fitting Repeat 4 # weights: 103 initial value 107.688501 final value 94.032967 converged Fitting Repeat 5 # weights: 103 initial value 97.098357 final value 94.017143 converged Fitting Repeat 1 # weights: 305 initial value 112.154446 final value 94.052910 converged Fitting Repeat 2 # weights: 305 initial value 98.155440 final value 94.052910 converged Fitting Repeat 3 # weights: 305 initial value 98.490248 final value 94.052910 converged Fitting Repeat 4 # weights: 305 initial value 96.236131 iter 10 value 93.877694 iter 20 value 93.720941 iter 20 value 93.720940 iter 20 value 93.720940 final value 93.720940 converged Fitting Repeat 5 # weights: 305 initial value 114.572725 final value 94.032967 converged Fitting Repeat 1 # weights: 507 initial value 102.721383 final value 94.052910 converged Fitting Repeat 2 # weights: 507 initial value 93.089043 iter 10 value 89.424389 iter 20 value 89.391363 iter 20 value 89.391362 final value 89.391362 converged Fitting Repeat 3 # weights: 507 initial value 123.863052 final value 94.052910 converged Fitting Repeat 4 # weights: 507 initial value 96.086128 final value 94.052910 converged Fitting Repeat 5 # weights: 507 initial value 100.471313 iter 10 value 93.647829 final value 93.647673 converged Fitting Repeat 1 # weights: 103 initial value 117.010941 iter 10 value 94.069306 iter 20 value 92.465143 iter 30 value 89.081585 iter 40 value 85.956764 iter 50 value 84.851669 iter 60 value 84.771338 iter 70 value 84.399949 iter 80 value 84.382300 final value 84.382288 converged Fitting Repeat 2 # weights: 103 initial value 103.526983 iter 10 value 94.145971 iter 20 value 93.028196 iter 30 value 86.663587 iter 40 value 86.513660 iter 50 value 85.613615 iter 60 value 85.027459 iter 70 value 85.020993 iter 70 value 85.020993 iter 70 value 85.020993 final value 85.020993 converged Fitting Repeat 3 # weights: 103 initial value 102.207300 iter 10 value 94.056819 iter 20 value 93.601287 iter 30 value 88.758074 iter 40 value 88.467363 iter 50 value 87.162237 iter 60 value 85.508750 iter 70 value 83.857282 iter 80 value 83.784478 final value 83.782287 converged Fitting Repeat 4 # weights: 103 initial value 108.566015 iter 10 value 94.055887 iter 20 value 93.433458 iter 30 value 87.079061 iter 40 value 86.356441 iter 50 value 84.787269 iter 60 value 84.394771 iter 70 value 83.846205 final value 83.802224 converged Fitting Repeat 5 # weights: 103 initial value 111.919080 iter 10 value 93.547900 iter 20 value 85.601553 iter 30 value 84.602630 iter 40 value 84.267971 iter 50 value 83.607331 iter 60 value 83.386085 final value 83.385625 converged Fitting Repeat 1 # weights: 305 initial value 101.572486 iter 10 value 94.051967 iter 20 value 88.027517 iter 30 value 86.785573 iter 40 value 84.874410 iter 50 value 83.965916 iter 60 value 83.277360 iter 70 value 83.143638 iter 80 value 83.091291 iter 90 value 83.012055 iter 100 value 82.403615 final value 82.403615 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 101.260041 iter 10 value 93.873308 iter 20 value 85.687883 iter 30 value 83.735395 iter 40 value 82.333484 iter 50 value 82.248407 iter 60 value 82.131905 iter 70 value 81.288193 iter 80 value 80.628100 iter 90 value 80.381438 iter 100 value 80.263326 final value 80.263326 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 111.791244 iter 10 value 94.102512 iter 20 value 93.993773 iter 30 value 90.794850 iter 40 value 86.487710 iter 50 value 85.967370 iter 60 value 85.083699 iter 70 value 82.543130 iter 80 value 81.478878 iter 90 value 80.853657 iter 100 value 80.743885 final value 80.743885 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 134.338961 iter 10 value 93.990873 iter 20 value 92.539293 iter 30 value 85.492998 iter 40 value 83.235288 iter 50 value 82.775315 iter 60 value 82.722745 iter 70 value 82.644449 iter 80 value 82.151150 iter 90 value 81.768536 iter 100 value 81.598956 final value 81.598956 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 110.679593 iter 10 value 93.945587 iter 20 value 88.252154 iter 30 value 87.665830 iter 40 value 87.294916 iter 50 value 86.634174 iter 60 value 85.004679 iter 70 value 83.245517 iter 80 value 82.592639 iter 90 value 82.124511 iter 100 value 82.081373 final value 82.081373 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 118.166552 iter 10 value 94.654613 iter 20 value 91.494825 iter 30 value 86.734809 iter 40 value 85.344058 iter 50 value 83.580269 iter 60 value 82.869391 iter 70 value 81.758824 iter 80 value 81.737997 iter 90 value 81.688942 iter 100 value 81.466407 final value 81.466407 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 107.668318 iter 10 value 93.916252 iter 20 value 92.967733 iter 30 value 92.861672 iter 40 value 90.118400 iter 50 value 89.549424 iter 60 value 88.391885 iter 70 value 83.888736 iter 80 value 81.625383 iter 90 value 81.190707 iter 100 value 80.938577 final value 80.938577 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 115.212685 iter 10 value 93.074026 iter 20 value 86.569169 iter 30 value 83.723666 iter 40 value 82.626038 iter 50 value 82.311962 iter 60 value 82.026876 iter 70 value 81.998179 iter 80 value 81.979874 iter 90 value 81.545612 iter 100 value 81.266840 final value 81.266840 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 111.147542 iter 10 value 94.138803 iter 20 value 93.959428 iter 30 value 90.544232 iter 40 value 86.518871 iter 50 value 84.662803 iter 60 value 83.379360 iter 70 value 82.937363 iter 80 value 82.746599 iter 90 value 82.191993 iter 100 value 81.384139 final value 81.384139 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 104.135041 iter 10 value 93.942126 iter 20 value 90.456502 iter 30 value 85.259554 iter 40 value 84.062347 iter 50 value 82.717409 iter 60 value 81.854276 iter 70 value 81.539318 iter 80 value 81.178076 iter 90 value 80.671627 iter 100 value 80.467060 final value 80.467060 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 97.015135 iter 10 value 94.054808 iter 20 value 94.048883 iter 30 value 91.610434 iter 40 value 91.269364 iter 50 value 91.242228 iter 60 value 91.241922 iter 70 value 91.238656 final value 91.238571 converged Fitting Repeat 2 # weights: 103 initial value 110.660561 final value 94.054679 converged Fitting Repeat 3 # weights: 103 initial value 94.789891 iter 10 value 94.034882 iter 20 value 92.703888 iter 30 value 86.178102 iter 40 value 86.079780 iter 50 value 86.079447 final value 86.079436 converged Fitting Repeat 4 # weights: 103 initial value 115.891593 final value 94.054638 converged Fitting Repeat 5 # weights: 103 initial value 104.685651 final value 94.054425 converged Fitting Repeat 1 # weights: 305 initial value 119.599886 iter 10 value 94.212869 iter 20 value 94.188866 iter 30 value 91.331076 iter 40 value 91.261026 iter 50 value 91.227372 iter 60 value 90.710959 iter 70 value 90.405340 iter 80 value 85.862002 iter 90 value 85.174146 iter 100 value 85.170975 final value 85.170975 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 109.217348 iter 10 value 91.473116 iter 20 value 88.972270 iter 30 value 87.970166 final value 87.918920 converged Fitting Repeat 3 # weights: 305 initial value 102.580078 iter 10 value 94.038498 iter 20 value 94.035827 iter 30 value 94.020714 iter 40 value 91.518477 iter 50 value 91.515114 iter 60 value 91.513842 iter 70 value 91.512244 iter 80 value 91.512193 iter 90 value 91.434682 iter 100 value 91.434086 final value 91.434086 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 95.931264 final value 94.059606 converged Fitting Repeat 5 # weights: 305 initial value 97.442516 iter 10 value 94.022019 iter 20 value 94.017556 final value 94.017226 converged Fitting Repeat 1 # weights: 507 initial value 127.083030 iter 10 value 94.040464 iter 20 value 93.655051 iter 30 value 93.654303 iter 40 value 93.576703 iter 50 value 93.532630 final value 93.532240 converged Fitting Repeat 2 # weights: 507 initial value 103.772396 iter 10 value 94.061226 iter 20 value 94.046675 iter 30 value 85.742722 iter 40 value 85.171259 iter 50 value 85.154236 iter 60 value 84.194072 iter 70 value 83.983244 final value 83.983235 converged Fitting Repeat 3 # weights: 507 initial value 112.133087 iter 10 value 94.060446 iter 20 value 94.003045 iter 30 value 93.810720 final value 93.810658 converged Fitting Repeat 4 # weights: 507 initial value 95.351779 iter 10 value 94.057352 iter 20 value 93.228007 iter 30 value 85.659987 iter 40 value 85.654136 iter 50 value 85.266833 final value 85.261321 converged Fitting Repeat 5 # weights: 507 initial value 104.308281 iter 10 value 88.004996 iter 20 value 86.506496 iter 30 value 85.667474 iter 40 value 85.643469 iter 50 value 84.355902 iter 60 value 83.928302 iter 70 value 83.926654 iter 80 value 83.856828 iter 90 value 83.820685 iter 100 value 83.815763 final value 83.815763 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 105.569746 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 95.260394 iter 10 value 94.277469 final value 94.275364 converged Fitting Repeat 3 # weights: 103 initial value 98.026420 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 106.372988 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 96.567457 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 98.235133 final value 93.320225 converged Fitting Repeat 2 # weights: 305 initial value 95.974321 final value 94.484211 converged Fitting Repeat 3 # weights: 305 initial value 101.181821 final value 94.484211 converged Fitting Repeat 4 # weights: 305 initial value 106.314993 final value 94.484211 converged Fitting Repeat 5 # weights: 305 initial value 96.468993 final value 94.484211 converged Fitting Repeat 1 # weights: 507 initial value 106.650201 iter 10 value 93.215707 final value 93.153558 converged Fitting Repeat 2 # weights: 507 initial value 118.622887 iter 10 value 92.552761 iter 20 value 92.507819 final value 92.507816 converged Fitting Repeat 3 # weights: 507 initial value 98.667959 iter 10 value 94.484211 iter 10 value 94.484211 iter 10 value 94.484211 final value 94.484211 converged Fitting Repeat 4 # weights: 507 initial value 106.619833 iter 10 value 93.394938 final value 93.394928 converged Fitting Repeat 5 # weights: 507 initial value 98.349435 iter 10 value 90.541343 iter 20 value 90.367454 final value 90.367204 converged Fitting Repeat 1 # weights: 103 initial value 99.869552 iter 10 value 93.807596 iter 20 value 86.447950 iter 30 value 86.337654 iter 40 value 84.680888 iter 50 value 84.516104 iter 60 value 84.481370 final value 84.481206 converged Fitting Repeat 2 # weights: 103 initial value 106.962652 iter 10 value 94.197731 iter 20 value 92.753421 iter 30 value 92.685455 iter 40 value 92.665200 iter 50 value 84.167443 iter 60 value 83.599668 iter 70 value 81.963551 iter 80 value 81.701484 iter 90 value 81.240951 iter 100 value 80.780698 final value 80.780698 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 104.649875 iter 10 value 93.679904 iter 20 value 86.934655 iter 30 value 84.783269 iter 40 value 84.483484 iter 50 value 84.482168 iter 60 value 84.472132 iter 70 value 84.356691 final value 84.344239 converged Fitting Repeat 4 # weights: 103 initial value 103.626989 iter 10 value 92.949592 iter 20 value 92.346501 iter 30 value 90.435714 iter 40 value 85.909194 iter 50 value 85.638929 iter 60 value 84.611118 iter 70 value 83.489937 iter 80 value 81.044981 iter 90 value 80.565835 iter 100 value 80.540965 final value 80.540965 stopped after 100 iterations Fitting Repeat 5 # weights: 103 initial value 113.892664 iter 10 value 94.375341 iter 20 value 92.807729 iter 30 value 92.657556 iter 40 value 92.653918 iter 50 value 91.796552 iter 60 value 83.887399 iter 70 value 83.716817 iter 80 value 83.444527 iter 90 value 81.444063 iter 100 value 80.899279 final value 80.899279 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 105.080072 iter 10 value 96.984455 iter 20 value 92.748186 iter 30 value 84.657737 iter 40 value 84.528047 iter 50 value 83.947905 iter 60 value 82.432251 iter 70 value 81.191301 iter 80 value 80.610047 iter 90 value 80.299536 iter 100 value 80.104125 final value 80.104125 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 105.818603 iter 10 value 92.956186 iter 20 value 89.143901 iter 30 value 87.692442 iter 40 value 87.422270 iter 50 value 84.328910 iter 60 value 82.798863 iter 70 value 81.837075 iter 80 value 80.876435 iter 90 value 79.969750 iter 100 value 79.413602 final value 79.413602 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 105.394257 iter 10 value 94.238437 iter 20 value 92.880225 iter 30 value 92.660573 iter 40 value 91.126313 iter 50 value 86.609071 iter 60 value 82.519165 iter 70 value 81.168521 iter 80 value 80.581775 iter 90 value 79.886096 iter 100 value 79.474556 final value 79.474556 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 99.735206 iter 10 value 93.426851 iter 20 value 87.676426 iter 30 value 83.815189 iter 40 value 80.521481 iter 50 value 80.271935 iter 60 value 80.160825 iter 70 value 80.066356 iter 80 value 79.929660 iter 90 value 79.888522 iter 100 value 79.778296 final value 79.778296 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 108.936561 iter 10 value 96.758797 iter 20 value 87.150988 iter 30 value 84.442123 iter 40 value 83.778185 iter 50 value 83.403324 iter 60 value 81.931525 iter 70 value 81.038084 iter 80 value 80.018931 iter 90 value 79.745426 iter 100 value 79.549163 final value 79.549163 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 105.353567 iter 10 value 94.669987 iter 20 value 93.981977 iter 30 value 90.374433 iter 40 value 86.927562 iter 50 value 85.148063 iter 60 value 82.108584 iter 70 value 80.899747 iter 80 value 80.355093 iter 90 value 80.021888 iter 100 value 79.586069 final value 79.586069 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 109.141847 iter 10 value 94.679835 iter 20 value 84.468599 iter 30 value 83.451018 iter 40 value 83.372776 iter 50 value 81.681375 iter 60 value 80.216895 iter 70 value 79.766190 iter 80 value 79.610589 iter 90 value 79.497712 iter 100 value 79.393876 final value 79.393876 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 116.239069 iter 10 value 95.163304 iter 20 value 92.691854 iter 30 value 86.674127 iter 40 value 84.539127 iter 50 value 83.704687 iter 60 value 83.243860 iter 70 value 82.200441 iter 80 value 81.186429 iter 90 value 80.496485 iter 100 value 79.995576 final value 79.995576 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 105.328822 iter 10 value 91.732374 iter 20 value 91.106937 iter 30 value 86.340283 iter 40 value 81.352410 iter 50 value 80.593939 iter 60 value 80.301773 iter 70 value 79.766642 iter 80 value 79.205522 iter 90 value 79.076759 iter 100 value 78.867674 final value 78.867674 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 108.041737 iter 10 value 94.094162 iter 20 value 93.069579 iter 30 value 92.474099 iter 40 value 84.598255 iter 50 value 83.783119 iter 60 value 83.642604 iter 70 value 81.380870 iter 80 value 80.638754 iter 90 value 80.227445 iter 100 value 79.688084 final value 79.688084 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 100.545535 final value 94.485796 converged Fitting Repeat 2 # weights: 103 initial value 104.586600 final value 94.486301 converged Fitting Repeat 3 # weights: 103 initial value 98.324391 final value 94.485858 converged Fitting Repeat 4 # weights: 103 initial value 100.022665 final value 94.485923 converged Fitting Repeat 5 # weights: 103 initial value 106.854529 final value 94.485463 converged Fitting Repeat 1 # weights: 305 initial value 113.396358 iter 10 value 94.489105 iter 20 value 94.484454 iter 30 value 93.497623 final value 93.395473 converged Fitting Repeat 2 # weights: 305 initial value 95.526967 iter 10 value 94.489151 final value 94.484213 converged Fitting Repeat 3 # weights: 305 initial value 97.765472 iter 10 value 93.232535 iter 20 value 93.146457 iter 30 value 93.143670 iter 40 value 93.131334 iter 50 value 84.554081 iter 60 value 82.790391 iter 70 value 82.639304 final value 82.634841 converged Fitting Repeat 4 # weights: 305 initial value 101.043017 iter 10 value 94.438851 iter 20 value 93.852504 iter 30 value 92.589059 iter 40 value 81.907455 iter 50 value 81.554006 iter 60 value 81.525892 final value 81.525807 converged Fitting Repeat 5 # weights: 305 initial value 105.312406 iter 10 value 94.487315 iter 20 value 92.218668 iter 30 value 85.401097 iter 40 value 85.362424 iter 50 value 85.351120 final value 85.347745 converged Fitting Repeat 1 # weights: 507 initial value 100.938279 iter 10 value 92.362591 iter 20 value 92.357816 iter 30 value 91.076099 iter 40 value 82.925759 iter 50 value 82.671906 iter 60 value 82.615474 iter 70 value 82.613611 iter 80 value 82.452397 iter 90 value 82.365826 iter 100 value 82.349504 final value 82.349504 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 99.938414 iter 10 value 94.492781 final value 94.485204 converged Fitting Repeat 3 # weights: 507 initial value 99.837349 iter 10 value 93.533223 iter 20 value 93.404930 iter 30 value 93.402534 iter 40 value 93.400313 iter 50 value 93.393173 iter 60 value 92.114561 iter 70 value 86.763045 iter 80 value 86.305022 iter 90 value 85.830762 iter 100 value 85.077522 final value 85.077522 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 99.952763 iter 10 value 94.487639 iter 20 value 94.213569 iter 30 value 87.880099 iter 40 value 87.815206 iter 50 value 87.802625 iter 60 value 86.063043 iter 70 value 81.679701 iter 80 value 81.678137 iter 90 value 81.675644 iter 100 value 80.528289 final value 80.528289 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 101.914171 iter 10 value 94.323734 iter 20 value 92.517701 iter 30 value 92.511342 iter 40 value 92.409746 final value 92.346106 converged Fitting Repeat 1 # weights: 507 initial value 130.883404 iter 10 value 117.908069 iter 20 value 117.885315 iter 30 value 116.432073 iter 40 value 115.188745 iter 50 value 115.184932 iter 60 value 113.704711 iter 70 value 107.233937 iter 80 value 107.009902 iter 90 value 106.913590 iter 100 value 106.905073 final value 106.905073 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 136.743804 iter 10 value 117.898824 iter 20 value 117.770394 iter 30 value 112.112966 iter 40 value 112.107808 iter 50 value 112.058973 iter 60 value 108.529009 iter 70 value 107.477415 iter 80 value 106.229303 iter 90 value 106.184653 iter 100 value 106.184441 final value 106.184441 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 126.113473 iter 10 value 117.898178 iter 20 value 117.688625 iter 30 value 105.526479 iter 40 value 104.285300 final value 104.284485 converged Fitting Repeat 4 # weights: 507 initial value 140.003348 iter 10 value 117.722668 iter 20 value 117.681562 iter 30 value 117.544278 iter 40 value 117.539339 iter 50 value 117.537806 iter 60 value 110.345157 iter 70 value 107.171933 iter 80 value 106.462803 iter 90 value 103.895795 iter 100 value 103.848618 final value 103.848618 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 168.879686 iter 10 value 117.900182 iter 20 value 117.891085 iter 30 value 117.861319 iter 40 value 110.796722 iter 50 value 107.006598 iter 60 value 107.004850 final value 107.004846 converged svmRadial ranger Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases RUNIT TEST PROTOCOL -- Mon Jul 15 21:15:51 2024 *********************************************** Number of test functions: 7 Number of errors: 0 Number of failures: 0 1 Test Suite : HPiP RUnit Tests - 7 test functions, 0 errors, 0 failures Number of test functions: 7 Number of errors: 0 Number of failures: 0 Warning messages: 1: `repeats` has no meaning for this resampling method. 2: executing %dopar% sequentially: no parallel backend registered > > > > > proc.time() user system elapsed 42.505 2.072 43.939
HPiP.Rcheck/HPiP-Ex.timings
name | user | system | elapsed | |
FSmethod | 35.325 | 1.639 | 37.241 | |
FreqInteractors | 0.261 | 0.015 | 0.280 | |
calculateAAC | 0.038 | 0.006 | 0.045 | |
calculateAutocor | 0.380 | 0.068 | 0.453 | |
calculateCTDC | 0.098 | 0.006 | 0.104 | |
calculateCTDD | 0.628 | 0.027 | 0.662 | |
calculateCTDT | 0.248 | 0.012 | 0.260 | |
calculateCTriad | 0.397 | 0.027 | 0.426 | |
calculateDC | 0.109 | 0.014 | 0.125 | |
calculateF | 0.372 | 0.012 | 0.387 | |
calculateKSAAP | 0.112 | 0.012 | 0.125 | |
calculateQD_Sm | 1.940 | 0.109 | 2.061 | |
calculateTC | 2.011 | 0.204 | 2.227 | |
calculateTC_Sm | 0.319 | 0.015 | 0.335 | |
corr_plot | 35.014 | 1.595 | 36.790 | |
enrichfindP | 0.516 | 0.067 | 7.870 | |
enrichfind_hp | 0.074 | 0.020 | 1.324 | |
enrichplot | 0.416 | 0.011 | 0.432 | |
filter_missing_values | 0.001 | 0.000 | 0.001 | |
getFASTA | 0.068 | 0.010 | 3.286 | |
getHPI | 0.001 | 0.001 | 0.001 | |
get_negativePPI | 0.002 | 0.001 | 0.002 | |
get_positivePPI | 0.001 | 0.000 | 0.000 | |
impute_missing_data | 0.002 | 0.000 | 0.002 | |
plotPPI | 0.075 | 0.002 | 0.078 | |
pred_ensembel | 14.465 | 0.508 | 10.923 | |
var_imp | 37.365 | 1.734 | 39.494 | |