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INSTALL report for bacon on tokay1

This page was generated on 2020-12-01 11:57:55 -0500 (Tue, 01 Dec 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE bacon PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 107/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
bacon 1.18.0
Maarten van Iterson
Snapshot Date: 2020-11-30 14:42:56 -0500 (Mon, 30 Nov 2020)
URL: https://git.bioconductor.org/packages/bacon
Branch: RELEASE_3_12
Last Commit: 8eb9db7
Last Changed Date: 2020-10-27 11:12:21 -0500 (Tue, 27 Oct 2020)
malbec1 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
nebbiolo1 Linux (Ubuntu 20.04.1 LTS) / x86_64  OK  OK  OK 
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida1 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: bacon
Version: 1.18.0
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.12/bioc/src/contrib/bacon_1.18.0.tar.gz && rm -rf bacon.buildbin-libdir && mkdir bacon.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=bacon.buildbin-libdir bacon_1.18.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL bacon_1.18.0.zip && rm bacon_1.18.0.tar.gz bacon_1.18.0.zip
StartedAt: 2020-11-30 17:55:46 -0500 (Mon, 30 Nov 2020)
EndedAt: 2020-11-30 17:56:02 -0500 (Mon, 30 Nov 2020)
EllapsedTime: 16.7 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.12/bioc/src/contrib/bacon_1.18.0.tar.gz && rm -rf bacon.buildbin-libdir && mkdir bacon.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=bacon.buildbin-libdir bacon_1.18.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL bacon_1.18.0.zip && rm bacon_1.18.0.tar.gz bacon_1.18.0.zip
###
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100 16361  100 16361    0     0   442k      0 --:--:-- --:--:-- --:--:--  499k

install for i386

* installing *source* package 'bacon' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c Rinit.c -o Rinit.o
Rinit.c:9:40: warning: missing braces around initializer [-Wmissing-braces]
 static const R_CMethodDef cMethods[] = {
                                        ^
"C:/rtools40/mingw32/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c bacon.c -o bacon.o
C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o bacon.dll tmp.def Rinit.o bacon.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.12-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.12-bioc/meat/bacon.buildbin-libdir/00LOCK-bacon/00new/bacon/libs/i386
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'bacon'
    finding HTML links ... done
    Bacon-class                             html  
    bacon                                   html  
    bias-methods                            html  
    dnormmix                                html  
    es-methods                              html  
    estimates-methods                       html  
    fit-methods                             html  
    inflation-methods                       html  
    meta-methods                            html  
    plot-Bacon-method                       html  
    plotnormmix                             html  
    posteriors-methods                      html  
    pval-methods                            html  
    rnormmix                                html  
    se-methods                              html  
    topTable-methods                        html  
    traces-methods                          html  
    tstat-methods                           html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'bacon' ...
** libs
"C:/rtools40/mingw64/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c Rinit.c -o Rinit.o
Rinit.c:9:40: warning: missing braces around initializer [-Wmissing-braces]
 static const R_CMethodDef cMethods[] = {
                                        ^
"C:/rtools40/mingw64/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c bacon.c -o bacon.o
C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o bacon.dll tmp.def Rinit.o bacon.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.12-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.12-bioc/meat/bacon.buildbin-libdir/bacon/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'bacon' as bacon_1.18.0.zip
* DONE (bacon)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'bacon' successfully unpacked and MD5 sums checked