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BUILD BIN report for BioTIP on tokay1

This page was generated on 2020-07-29 11:43:53 -0400 (Wed, 29 Jul 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE BioTIP PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 178/1879HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
BioTIP 1.3.0
Zhezhen Wang , X Holly Yang < xyang2@uchicago> and Yuxi (Jennifer) Sun
Snapshot Date: 2020-07-28 14:50:55 -0400 (Tue, 28 Jul 2020)
URL: https://git.bioconductor.org/packages/BioTIP
Branch: master
Last Commit: b00b2f8
Last Changed Date: 2020-07-20 18:48:03 -0400 (Mon, 20 Jul 2020)
malbec1 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64  OK  OK  WARNINGS [ OK ]UNNEEDED, same version exists in internal repository
merida1 macOS 10.14.6 Mojave / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: BioTIP
Version: 1.3.0
Command: rm -rf BioTIP.buildbin-libdir && mkdir BioTIP.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BioTIP.buildbin-libdir BioTIP_1.3.0.tar.gz
StartedAt: 2020-07-29 08:42:25 -0400 (Wed, 29 Jul 2020)
EndedAt: 2020-07-29 08:43:17 -0400 (Wed, 29 Jul 2020)
EllapsedTime: 51.5 seconds
RetCode: 0
Status:  OK  
PackageFile: BioTIP_1.3.0.zip
PackageFileSize: 2.431 MiB

Command output

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### Running command:
###
###   rm -rf BioTIP.buildbin-libdir && mkdir BioTIP.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BioTIP.buildbin-libdir BioTIP_1.3.0.tar.gz
###
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install for i386

* installing *source* package 'BioTIP' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
Warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpqmRNr1/R.INSTALL361c2e1a2ad2/BioTIP/man/optimize.sd_selection.Rd:40: unknown macro '\item'
Warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpqmRNr1/R.INSTALL361c2e1a2ad2/BioTIP/man/optimize.sd_selection.Rd:52: unknown macro '\item'
Warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpqmRNr1/R.INSTALL361c2e1a2ad2/BioTIP/man/optimize.sd_selection.Rd:55: unknown macro '\item'
Warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpqmRNr1/R.INSTALL361c2e1a2ad2/BioTIP/man/optimize.sd_selection.Rd:58: unexpected section header '\value'
Warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpqmRNr1/R.INSTALL361c2e1a2ad2/BioTIP/man/optimize.sd_selection.Rd:63: unexpected section header '\description'
Warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpqmRNr1/R.INSTALL361c2e1a2ad2/BioTIP/man/optimize.sd_selection.Rd:68: unexpected section header '\examples'
Warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpqmRNr1/R.INSTALL361c2e1a2ad2/BioTIP/man/optimize.sd_selection.Rd:78: unexpected section header '\seealso'
Warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpqmRNr1/R.INSTALL361c2e1a2ad2/BioTIP/man/optimize.sd_selection.Rd:81: unexpected section header '\author'
Warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpqmRNr1/R.INSTALL361c2e1a2ad2/BioTIP/man/optimize.sd_selection.Rd:84: unexpected END_OF_INPUT '
'
Warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpqmRNr1/R.INSTALL361c2e1a2ad2/BioTIP/man/sd_selection.Rd:29: unknown macro '\item'
Warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpqmRNr1/R.INSTALL361c2e1a2ad2/BioTIP/man/sd_selection.Rd:41: unknown macro '\item'
Warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpqmRNr1/R.INSTALL361c2e1a2ad2/BioTIP/man/sd_selection.Rd:44: unknown macro '\item'
Warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpqmRNr1/R.INSTALL361c2e1a2ad2/BioTIP/man/sd_selection.Rd:47: unexpected section header '\value'
Warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpqmRNr1/R.INSTALL361c2e1a2ad2/BioTIP/man/sd_selection.Rd:54: unexpected section header '\description'
Warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpqmRNr1/R.INSTALL361c2e1a2ad2/BioTIP/man/sd_selection.Rd:61: unexpected section header '\examples'
Warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpqmRNr1/R.INSTALL361c2e1a2ad2/BioTIP/man/sd_selection.Rd:71: unexpected section header '\seealso'
Warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpqmRNr1/R.INSTALL361c2e1a2ad2/BioTIP/man/sd_selection.Rd:74: unexpected section header '\author'
Warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpqmRNr1/R.INSTALL361c2e1a2ad2/BioTIP/man/sd_selection.Rd:77: unexpected END_OF_INPUT '
'
*** installing help indices
  converting help for package 'BioTIP'
    finding HTML links ... done
    BioTIP-package                          html  
    GSE6136_cli                             html  
    GSE6136_matrix                          html  
    ILEF                                    html  
    avg.cor.shrink                          html  
    cod                                     html  
    cor.shrink                              html  
    gencode                                 html  
    getBiotypes                             html  
    getCTS                                  html  
    getCluster_methods                      html  
    getIc                                   html  
    getIc.new                               html  
    getMCI                                  html  
    finding level-2 HTML links ... done

    getMCI_inner                            html  
    getMaxMCImember                         html  
    getMaxStats                             html  
    getNetwork                              html  
    getReadthrough                          html  
    intron                                  html  
    optimize.sd_selection                   html  
    plotBar_MCI                             html  
    plotIc                                  html  
    plotMaxMCI                              html  
    plot_Ic_Simulation                      html  
    plot_MCI_Simulation                     html  
    plot_SS_Simulation                      html  
    sd_selection                            html  
    simulationMCI                           html  
    simulation_Ic                           html  
    simulation_Ic_sample                    html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'BioTIP' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'BioTIP' as BioTIP_1.3.0.zip
* DONE (BioTIP)