Back to Multiple platform build/check report for BioC 3.18:   simplified   long
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This page was generated on 2024-03-01 11:35:36 -0500 (Fri, 01 Mar 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 22.04.3 LTS)x86_644.3.2 Patched (2023-11-13 r85521) -- "Eye Holes" 4692
palomino4Windows Server 2022 Datacenterx644.3.2 (2023-10-31 ucrt) -- "Eye Holes" 4445
lconwaymacOS 12.7.1 Montereyx86_644.3.2 Patched (2023-11-01 r85457) -- "Eye Holes" 4466
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

All results for package ShortRead


To the developers/maintainers of the ShortRead package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ShortRead.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Package 1943/2266HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ShortRead 1.60.0  (landing page)
Bioconductor Package Maintainer
Snapshot Date: 2024-02-29 14:05:06 -0500 (Thu, 29 Feb 2024)
git_url: https://git.bioconductor.org/packages/ShortRead
git_branch: RELEASE_3_18
git_last_commit: 4304db4
git_last_commit_date: 2023-10-24 09:39:49 -0500 (Tue, 24 Oct 2023)
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
palomino4Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.1 Ventura / arm64see weekly results here

Results for Bioconductor software packages that depend directly on package ShortRead

QUICK STATSOS / ArchINSTALLBUILDCHECKBUILD BIN
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64
0028
0028
01522
palomino4Windows Server 2022 Datacenter / x64
0027
0027
02421
0027
lconwaymacOS 12.7.1 Monterey / x86_64
0027
0027
01521
0027
Package 1/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
amplican 1.24.0  (landing page)
Eivind Valen
git_last_commit: 265b7ec
git_last_commit_date: 2023-10-24 10:59:34 -0500
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino4Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.1 Ventura / arm64see weekly results here
Package 2/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
basecallQC 1.26.0  (landing page)
Thomas Carroll
git_last_commit: 39cd7e8
git_last_commit_date: 2023-10-24 10:56:44 -0500
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino4Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.1 Ventura / arm64see weekly results here
Package 3/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
BEAT 1.40.0  (landing page)
Kemal Akman
git_last_commit: 27254d0
git_last_commit_date: 2023-10-24 09:57:14 -0500
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino4Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.1 Ventura / arm64see weekly results here
Package 4/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CellBarcode 1.8.1  (landing page)
Wenjie Sun
git_last_commit: a70f2d2
git_last_commit_date: 2024-02-20 03:53:33 -0500
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino4Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.1 Ventura / arm64see weekly results here
Package 5/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
chipseq 1.52.0  (landing page)
Bioconductor Package Maintainer
git_last_commit: 1092f8c
git_last_commit_date: 2023-10-24 09:42:03 -0500
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
palomino4Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.1 Ventura / arm64see weekly results here
Package 6/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ChIPseqR 1.56.0  (landing page)
Peter Humburg
git_last_commit: b474bac
git_last_commit_date: 2023-10-24 09:42:51 -0500
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino4Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.1 Ventura / arm64see weekly results here
Package 7/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ChIPsim 1.56.0  (landing page)
Peter Humburg
git_last_commit: c3ecaa6
git_last_commit_date: 2023-10-24 09:42:24 -0500
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino4Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.1 Ventura / arm64see weekly results here
Package 8/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CircSeqAlignTk 1.4.0  (landing page)
Jianqiang Sun
git_last_commit: 958204b
git_last_commit_date: 2023-10-24 11:44:28 -0500
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino4Windows Server 2022 Datacenter / x64  OK    OK    ERROR    OK  
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.1 Ventura / arm64see weekly results here
Package 9/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
dada2 1.30.0  (landing page)
Benjamin Callahan
git_last_commit: ec87892
git_last_commit_date: 2023-10-24 10:47:58 -0500
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino4Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.1 Ventura / arm64see weekly results here
Package 10/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
easyRNASeq 2.38.0  (landing page)
Nicolas Delhomme
git_last_commit: e7d99c2
git_last_commit_date: 2023-10-24 09:49:08 -0500
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino4Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.1 Ventura / arm64see weekly results here
Package 11/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
EDASeq 2.36.0  (landing page)
Davide Risso
git_last_commit: af70dab
git_last_commit_date: 2023-10-24 09:47:57 -0500
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino4Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.1 Ventura / arm64see weekly results here
Package 12/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
esATAC 1.24.0  (landing page)
Zheng Wei
git_last_commit: fc5274b
git_last_commit_date: 2023-10-24 11:01:27 -0500
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino4Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.1 Ventura / arm64see weekly results here
Package 13/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
FastqCleaner 1.20.0  (landing page)
Leandro Roser
git_last_commit: 358c1ad
git_last_commit_date: 2023-10-24 11:05:49 -0500
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino4Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.1 Ventura / arm64see weekly results here
Package 14/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
girafe 1.54.0  (landing page)
J. Toedling
git_last_commit: 15a7530
git_last_commit_date: 2023-10-24 09:43:38 -0500
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino4Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.1 Ventura / arm64see weekly results here
Package 15/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GOTHiC 1.38.0  (landing page)
Borbala Mifsud
git_last_commit: 809ce7c
git_last_commit_date: 2023-10-24 11:15:00 -0500
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino4Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.1 Ventura / arm64see weekly results here
Package 16/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
HTSeqGenie 4.32.0  (landing page)
Jens Reeder
git_last_commit: 9a84f3d
git_last_commit_date: 2023-10-24 09:51:39 -0500
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino4Windows Server 2022 Datacenter / x64... NOT SUPPORTED ...
lconwaymacOS 12.7.1 Monterey / x86_64... NOT SUPPORTED ...
kjohnson1macOS 13.6.1 Ventura / arm64see weekly results here
Package 17/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
icetea 1.20.0  (landing page)
Vivek Bhardwaj
git_last_commit: 7b58dbe
git_last_commit_date: 2023-10-24 11:06:09 -0500
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
palomino4Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.1 Ventura / arm64see weekly results here
Package 18/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
IONiseR 2.26.0  (landing page)
Mike Smith
git_last_commit: 44d1bbb
git_last_commit_date: 2023-10-24 10:44:01 -0500
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino4Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.1 Ventura / arm64see weekly results here
Package 19/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
nucleR 2.34.0  (landing page)
Alba Sala
git_last_commit: 49b3021
git_last_commit_date: 2023-10-24 09:47:23 -0500
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
palomino4Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.1 Ventura / arm64see weekly results here
Package 20/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
OTUbase 1.52.0  (landing page)
Daniel Beck
git_last_commit: e02b2a4
git_last_commit_date: 2023-10-24 09:44:51 -0500
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino4Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.1 Ventura / arm64see weekly results here
Package 21/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
QuasR 1.42.1  (landing page)
Michael Stadler
git_last_commit: 04c8406
git_last_commit_date: 2023-11-01 08:10:31 -0500
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
palomino4Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.1 Ventura / arm64see weekly results here
Package 22/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
R453Plus1Toolbox 1.52.0  (landing page)
Hans-Ulrich Klein
git_last_commit: f72252b
git_last_commit_date: 2023-10-24 09:45:08 -0500
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino4Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.1 Ventura / arm64see weekly results here
Package 23/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
Rqc 1.36.0  (landing page)
Welliton Souza
git_last_commit: 500f192
git_last_commit_date: 2023-10-24 10:40:04 -0500
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino4Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.1 Ventura / arm64see weekly results here
Package 24/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
RSVSim 1.42.0  (landing page)
Christoph Bartenhagen
git_last_commit: 3cc9f3d
git_last_commit_date: 2023-10-24 09:52:21 -0500
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino4Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.1 Ventura / arm64see weekly results here
Package 25/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
scruff 1.20.0  (landing page)
Zhe Wang
git_last_commit: 9c5a572
git_last_commit_date: 2023-10-24 11:06:39 -0500
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino4Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.1 Ventura / arm64see weekly results here
Package 26/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
segmentSeq 2.36.0  (landing page)
Thomas J. Hardcastle
git_last_commit: 4116a42
git_last_commit_date: 2023-10-24 09:43:27 -0500
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
palomino4Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.1 Ventura / arm64see weekly results here
Package 27/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
systemPipeR 2.8.0  (landing page)
Thomas Girke
git_last_commit: 7cfd237
git_last_commit_date: 2023-10-24 10:38:27 -0500
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino4Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.1 Ventura / arm64see weekly results here
Package 28/28HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
UMI4Cats 1.12.0  (landing page)
Mireia Ramos-Rodriguez
git_last_commit: df941ac
git_last_commit_date: 2023-10-24 11:24:33 -0500
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    ERROR  
palomino4Windows Server 2022 Datacenter / x64  OK    OK    ERROR    OK  
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    ERROR    OK  
kjohnson1macOS 13.6.1 Ventura / arm64see weekly results here