Back to Multiple platform build/check report for BioC 3.20: simplified long |
|
This page was generated on 2024-05-03 11:38:27 -0400 (Fri, 03 May 2024).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.4.0 RC (2024-04-16 r86468) -- "Puppy Cup" | 4660 |
palomino4 | Windows Server 2022 Datacenter | x64 | 4.4.0 RC (2024-04-16 r86468 ucrt) -- "Puppy Cup" | 4391 |
merida1 | macOS 12.7.4 Monterey | x86_64 | 4.4.0 Patched (2024-04-24 r86482) -- "Puppy Cup" | 4422 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
Package 957/2230 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
HPiP 1.11.0 (landing page) Matineh Rahmatbakhsh
| nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | OK | OK | |||||||||
palomino4 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | |||||||||
merida1 | macOS 12.7.4 Monterey / x86_64 | OK | OK | OK | OK | |||||||||
kjohnson1 | macOS 13.6.6 Ventura / arm64 | see weekly results here | ||||||||||||
To the developers/maintainers of the HPiP package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/HPiP.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
Package: HPiP |
Version: 1.11.0 |
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:HPiP.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings HPiP_1.11.0.tar.gz |
StartedAt: 2024-05-02 05:49:53 -0400 (Thu, 02 May 2024) |
EndedAt: 2024-05-02 05:59:18 -0400 (Thu, 02 May 2024) |
EllapsedTime: 564.7 seconds |
RetCode: 0 |
Status: OK |
CheckDir: HPiP.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:HPiP.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings HPiP_1.11.0.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/Users/biocbuild/bbs-3.20-bioc/meat/HPiP.Rcheck’ * using R version 4.4.0 Patched (2024-04-24 r86482) * using platform: x86_64-apple-darwin20 * R was compiled by Apple clang version 14.0.0 (clang-1400.0.29.202) GNU Fortran (GCC) 12.2.0 * running under: macOS Monterey 12.7.4 * using session charset: UTF-8 * using option ‘--no-vignettes’ * checking for file ‘HPiP/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘HPiP’ version ‘1.11.0’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘HPiP’ can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... NOTE License stub is invalid DCF. * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... NOTE checkRd: (-1) getHPI.Rd:29: Lost braces 29 | then the Kronecker product is the code{(pm × qn)} block matrix | ^ * checking Rd metadata ... OK * checking Rd cross-references ... NOTE Package unavailable to check Rd xrefs: ‘ftrCOOL’ * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking R/sysdata.rda ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK Examples with CPU (user + system) or elapsed time > 5s user system elapsed var_imp 53.505 1.954 67.054 corr_plot 51.678 1.992 64.682 FSmethod 51.168 1.875 62.185 pred_ensembel 25.036 0.527 26.456 calculateTC 4.879 0.464 6.271 enrichfindP 0.919 0.089 14.017 * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘runTests.R’ OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking running R code from vignettes ... SKIPPED * checking re-building of vignette outputs ... SKIPPED * checking PDF version of manual ... OK * DONE Status: 3 NOTEs See ‘/Users/biocbuild/bbs-3.20-bioc/meat/HPiP.Rcheck/00check.log’ for details.
HPiP.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL HPiP ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library’ * installing *source* package ‘HPiP’ ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (HPiP)
HPiP.Rcheck/tests/runTests.Rout
R version 4.4.0 Patched (2024-04-24 r86482) -- "Puppy Cup" Copyright (C) 2024 The R Foundation for Statistical Computing Platform: x86_64-apple-darwin20 R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > BiocGenerics:::testPackage('HPiP') No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE avNNet Loading required package: ggplot2 Loading required package: lattice Fitting Repeat 1 # weights: 103 initial value 100.218086 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 99.584892 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 95.122582 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 99.064857 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 102.685841 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 104.568214 final value 94.484211 converged Fitting Repeat 2 # weights: 305 initial value 96.954001 final value 94.484211 converged Fitting Repeat 3 # weights: 305 initial value 97.408044 final value 93.783647 converged Fitting Repeat 4 # weights: 305 initial value 96.885250 final value 94.484211 converged Fitting Repeat 5 # weights: 305 initial value 104.159612 final value 94.026542 converged Fitting Repeat 1 # weights: 507 initial value 101.324884 iter 10 value 94.019051 final value 94.014407 converged Fitting Repeat 2 # weights: 507 initial value 110.033966 iter 10 value 92.517180 iter 20 value 91.785743 iter 30 value 91.554867 final value 91.533272 converged Fitting Repeat 3 # weights: 507 initial value 99.050664 iter 10 value 93.977500 final value 93.961942 converged Fitting Repeat 4 # weights: 507 initial value 120.147079 iter 10 value 93.991508 final value 93.822754 converged Fitting Repeat 5 # weights: 507 initial value 111.271396 final value 94.026542 converged Fitting Repeat 1 # weights: 103 initial value 114.726655 iter 10 value 94.525127 iter 20 value 94.452379 iter 30 value 93.385140 iter 40 value 88.627990 iter 50 value 84.692198 iter 60 value 84.471974 iter 70 value 83.579364 iter 80 value 83.496461 iter 90 value 83.482528 iter 100 value 83.476793 final value 83.476793 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 98.372012 iter 10 value 94.545774 iter 20 value 86.703038 iter 30 value 84.455522 iter 40 value 84.192163 iter 50 value 83.986261 iter 60 value 83.975590 final value 83.975588 converged Fitting Repeat 3 # weights: 103 initial value 97.640831 iter 10 value 94.016908 iter 20 value 93.682577 iter 30 value 91.430620 iter 40 value 89.935680 iter 50 value 89.358188 iter 60 value 89.128081 iter 70 value 83.761084 iter 80 value 82.846939 iter 90 value 81.995742 iter 100 value 81.349572 final value 81.349572 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 98.754275 iter 10 value 94.460249 iter 20 value 93.982586 iter 30 value 93.877501 iter 40 value 93.795762 iter 50 value 88.445503 iter 60 value 85.010650 iter 70 value 84.401468 iter 80 value 84.293967 iter 90 value 84.040936 iter 100 value 83.979787 final value 83.979787 stopped after 100 iterations Fitting Repeat 5 # weights: 103 initial value 101.049806 iter 10 value 94.486684 iter 20 value 94.145864 iter 30 value 94.139029 iter 40 value 93.964394 iter 50 value 88.542636 iter 60 value 86.460910 iter 70 value 86.446546 iter 80 value 86.441787 iter 90 value 86.440920 iter 100 value 86.085948 final value 86.085948 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 131.197727 iter 10 value 94.300927 iter 20 value 93.131924 iter 30 value 86.573279 iter 40 value 86.064758 iter 50 value 84.771576 iter 60 value 84.291926 iter 70 value 82.399899 iter 80 value 81.504708 iter 90 value 80.729526 iter 100 value 80.185480 final value 80.185480 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 100.023924 iter 10 value 93.573536 iter 20 value 92.683058 iter 30 value 86.045002 iter 40 value 85.438632 iter 50 value 83.529178 iter 60 value 80.707664 iter 70 value 80.162749 iter 80 value 79.932144 iter 90 value 79.636395 iter 100 value 79.434341 final value 79.434341 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 101.299628 iter 10 value 94.483177 iter 20 value 94.182427 iter 30 value 94.029109 iter 40 value 91.422644 iter 50 value 84.537355 iter 60 value 84.072283 iter 70 value 82.456001 iter 80 value 81.779803 iter 90 value 81.572699 iter 100 value 80.960611 final value 80.960611 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 103.378486 iter 10 value 93.730195 iter 20 value 87.493840 iter 30 value 84.519530 iter 40 value 83.586527 iter 50 value 82.035266 iter 60 value 80.987203 iter 70 value 80.881274 iter 80 value 80.782679 iter 90 value 80.664977 iter 100 value 80.615195 final value 80.615195 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 100.307767 iter 10 value 94.720025 iter 20 value 92.940766 iter 30 value 91.872376 iter 40 value 91.367361 iter 50 value 85.159272 iter 60 value 84.031174 iter 70 value 82.294548 iter 80 value 82.148620 iter 90 value 82.081847 iter 100 value 82.023784 final value 82.023784 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 129.435809 iter 10 value 94.536608 iter 20 value 87.302782 iter 30 value 86.484549 iter 40 value 84.647718 iter 50 value 81.455036 iter 60 value 80.418628 iter 70 value 79.853234 iter 80 value 79.583543 iter 90 value 79.413963 iter 100 value 79.374227 final value 79.374227 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 104.215612 iter 10 value 94.506484 iter 20 value 94.295449 iter 30 value 91.886388 iter 40 value 86.485948 iter 50 value 82.274381 iter 60 value 82.057148 iter 70 value 81.089207 iter 80 value 79.853089 iter 90 value 79.488012 iter 100 value 79.328830 final value 79.328830 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 107.183966 iter 10 value 94.208476 iter 20 value 93.545603 iter 30 value 86.158271 iter 40 value 85.669956 iter 50 value 84.935611 iter 60 value 83.452077 iter 70 value 82.113856 iter 80 value 82.001495 iter 90 value 81.353694 iter 100 value 80.181909 final value 80.181909 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 110.520432 iter 10 value 94.556678 iter 20 value 88.146791 iter 30 value 85.254236 iter 40 value 84.992706 iter 50 value 84.378118 iter 60 value 82.600528 iter 70 value 81.955943 iter 80 value 81.002308 iter 90 value 80.611118 iter 100 value 80.185373 final value 80.185373 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 115.998824 iter 10 value 94.679501 iter 20 value 89.896547 iter 30 value 85.864399 iter 40 value 84.305055 iter 50 value 82.823220 iter 60 value 81.732215 iter 70 value 80.995632 iter 80 value 80.243817 iter 90 value 79.973602 iter 100 value 79.824884 final value 79.824884 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 96.611985 final value 94.486866 converged Fitting Repeat 2 # weights: 103 initial value 97.695439 final value 94.486049 converged Fitting Repeat 3 # weights: 103 initial value 107.565989 iter 10 value 94.485872 iter 20 value 94.484229 final value 94.484219 converged Fitting Repeat 4 # weights: 103 initial value 101.422671 final value 94.485655 converged Fitting Repeat 5 # weights: 103 initial value 99.166276 iter 10 value 94.486360 final value 94.484366 converged Fitting Repeat 1 # weights: 305 initial value 97.669837 iter 10 value 93.502422 iter 20 value 93.314632 iter 30 value 93.314217 iter 40 value 93.313018 iter 50 value 93.312275 iter 60 value 93.311793 iter 70 value 91.452160 iter 80 value 88.020228 iter 90 value 85.347675 iter 100 value 83.392590 final value 83.392590 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 130.302752 iter 10 value 94.489449 iter 20 value 94.484230 iter 30 value 94.031533 final value 94.027068 converged Fitting Repeat 3 # weights: 305 initial value 108.889211 iter 10 value 94.489155 iter 20 value 94.484262 iter 30 value 92.748672 iter 40 value 91.060124 iter 50 value 90.921801 iter 60 value 90.921644 final value 90.921529 converged Fitting Repeat 4 # weights: 305 initial value 104.483725 iter 10 value 94.488246 iter 20 value 93.907417 final value 93.851640 converged Fitting Repeat 5 # weights: 305 initial value 105.172250 iter 10 value 94.488979 iter 20 value 94.484288 iter 30 value 94.335446 iter 40 value 93.782313 iter 50 value 85.784229 iter 60 value 85.783088 final value 85.783066 converged Fitting Repeat 1 # weights: 507 initial value 98.909132 iter 10 value 94.493615 iter 20 value 94.478610 iter 30 value 94.048918 iter 40 value 94.047990 final value 94.047508 converged Fitting Repeat 2 # weights: 507 initial value 101.862808 iter 10 value 94.492887 iter 20 value 94.481709 iter 30 value 93.857605 iter 40 value 87.063867 iter 50 value 87.009469 iter 60 value 87.009398 iter 60 value 87.009397 iter 60 value 87.009397 final value 87.009397 converged Fitting Repeat 3 # weights: 507 initial value 108.184118 iter 10 value 94.271815 iter 20 value 94.265051 iter 30 value 93.838992 final value 93.763197 converged Fitting Repeat 4 # weights: 507 initial value 117.009432 iter 10 value 93.879801 iter 20 value 85.984423 iter 30 value 84.007890 iter 40 value 83.988866 iter 50 value 83.978669 iter 60 value 82.575217 iter 70 value 80.907629 iter 80 value 80.885061 iter 90 value 80.139988 iter 100 value 78.703291 final value 78.703291 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 107.508210 iter 10 value 93.831230 iter 20 value 93.826116 iter 30 value 93.180778 iter 40 value 84.410340 iter 50 value 83.759141 iter 60 value 83.583234 iter 70 value 83.545098 iter 80 value 83.425166 iter 90 value 82.235292 iter 100 value 81.890650 final value 81.890650 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 95.479812 final value 94.052910 converged Fitting Repeat 2 # weights: 103 initial value 93.395677 iter 10 value 90.711698 iter 20 value 90.692042 iter 30 value 90.691975 iter 30 value 90.691975 iter 30 value 90.691975 final value 90.691975 converged Fitting Repeat 3 # weights: 103 initial value 99.870736 final value 94.052910 converged Fitting Repeat 4 # weights: 103 initial value 99.165759 final value 94.052910 converged Fitting Repeat 5 # weights: 103 initial value 100.105283 final value 94.052910 converged Fitting Repeat 1 # weights: 305 initial value 101.736206 iter 10 value 91.536377 iter 20 value 91.227311 iter 30 value 91.226771 iter 40 value 90.861537 iter 50 value 90.856923 final value 90.856802 converged Fitting Repeat 2 # weights: 305 initial value 99.532573 iter 10 value 93.915746 iter 10 value 93.915746 iter 10 value 93.915746 final value 93.915746 converged Fitting Repeat 3 # weights: 305 initial value 99.410332 iter 10 value 93.747884 iter 20 value 93.697144 iter 20 value 93.697144 iter 20 value 93.697144 final value 93.697144 converged Fitting Repeat 4 # weights: 305 initial value 100.689186 final value 93.915746 converged Fitting Repeat 5 # weights: 305 initial value 97.110176 final value 94.052910 converged Fitting Repeat 1 # weights: 507 initial value 97.721604 final value 94.052910 converged Fitting Repeat 2 # weights: 507 initial value 111.843643 iter 10 value 93.188103 iter 20 value 93.090599 iter 20 value 93.090599 iter 20 value 93.090599 final value 93.090599 converged Fitting Repeat 3 # weights: 507 initial value 98.582226 final value 93.915746 converged Fitting Repeat 4 # weights: 507 initial value 94.577197 iter 10 value 92.510597 iter 20 value 92.510181 final value 92.510177 converged Fitting Repeat 5 # weights: 507 initial value 106.220857 iter 10 value 85.343395 iter 20 value 82.903244 iter 30 value 82.884585 iter 40 value 82.837208 final value 82.837200 converged Fitting Repeat 1 # weights: 103 initial value 104.059992 iter 10 value 94.073657 iter 20 value 93.989285 iter 30 value 93.642478 iter 40 value 93.638532 iter 50 value 88.230685 iter 60 value 85.851626 iter 70 value 84.173539 iter 80 value 83.624722 iter 90 value 83.260470 iter 100 value 83.138627 final value 83.138627 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 97.424869 iter 10 value 93.825894 iter 20 value 87.193940 iter 30 value 83.906995 iter 40 value 83.430107 iter 50 value 83.098220 iter 60 value 82.868197 final value 82.860405 converged Fitting Repeat 3 # weights: 103 initial value 113.634044 iter 10 value 94.027078 iter 20 value 87.181962 iter 30 value 84.061907 iter 40 value 83.848580 iter 50 value 83.781478 iter 60 value 83.618708 iter 70 value 83.106740 iter 80 value 83.042486 iter 90 value 83.025385 iter 100 value 82.922629 final value 82.922629 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 100.419964 iter 10 value 93.692022 iter 20 value 89.054064 iter 30 value 84.350533 iter 40 value 82.833052 iter 50 value 81.254191 iter 60 value 80.695072 iter 70 value 80.579246 iter 80 value 80.569969 final value 80.569897 converged Fitting Repeat 5 # weights: 103 initial value 99.256179 iter 10 value 94.219449 iter 20 value 94.058498 iter 30 value 90.545189 iter 40 value 84.330909 iter 50 value 82.197588 iter 60 value 82.061609 iter 70 value 81.875487 iter 80 value 81.010637 iter 90 value 80.966238 iter 100 value 80.906639 final value 80.906639 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 103.740026 iter 10 value 93.787171 iter 20 value 86.234467 iter 30 value 85.500377 iter 40 value 85.412179 iter 50 value 83.399965 iter 60 value 82.540771 iter 70 value 81.071102 iter 80 value 80.866724 iter 90 value 80.736526 iter 100 value 80.639908 final value 80.639908 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 103.207981 iter 10 value 94.313006 iter 20 value 93.399130 iter 30 value 92.277538 iter 40 value 91.687868 iter 50 value 88.541657 iter 60 value 83.922692 iter 70 value 82.399036 iter 80 value 82.286071 iter 90 value 81.945150 iter 100 value 80.995656 final value 80.995656 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 120.268431 iter 10 value 93.107405 iter 20 value 88.607384 iter 30 value 81.875856 iter 40 value 80.887894 iter 50 value 80.343888 iter 60 value 80.084517 iter 70 value 80.059034 iter 80 value 80.022668 iter 90 value 79.928816 iter 100 value 79.868676 final value 79.868676 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 99.081460 iter 10 value 94.068204 iter 20 value 87.104747 iter 30 value 84.595866 iter 40 value 84.227292 iter 50 value 83.065472 iter 60 value 81.721330 iter 70 value 81.480963 iter 80 value 81.386876 iter 90 value 81.240961 iter 100 value 81.029098 final value 81.029098 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 107.241159 iter 10 value 93.966890 iter 20 value 87.134897 iter 30 value 84.673051 iter 40 value 83.566889 iter 50 value 81.692815 iter 60 value 81.469414 iter 70 value 81.144047 iter 80 value 80.233214 iter 90 value 79.877535 iter 100 value 79.671934 final value 79.671934 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 132.854628 iter 10 value 95.435194 iter 20 value 93.806038 iter 30 value 85.447496 iter 40 value 84.063690 iter 50 value 83.767903 iter 60 value 82.218405 iter 70 value 80.983469 iter 80 value 80.253065 iter 90 value 80.112251 iter 100 value 80.017234 final value 80.017234 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 121.315762 iter 10 value 94.347613 iter 20 value 88.416345 iter 30 value 87.072029 iter 40 value 86.474540 iter 50 value 86.200806 iter 60 value 84.481887 iter 70 value 82.486553 iter 80 value 81.377190 iter 90 value 80.342920 iter 100 value 79.994008 final value 79.994008 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 109.543198 iter 10 value 94.072562 iter 20 value 86.198624 iter 30 value 85.291084 iter 40 value 82.331802 iter 50 value 80.392708 iter 60 value 79.817151 iter 70 value 79.681017 iter 80 value 79.412977 iter 90 value 79.379120 iter 100 value 79.354385 final value 79.354385 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 113.347954 iter 10 value 88.452048 iter 20 value 84.371785 iter 30 value 83.919172 iter 40 value 82.763277 iter 50 value 81.723617 iter 60 value 80.805728 iter 70 value 80.465376 iter 80 value 80.027930 iter 90 value 79.931396 iter 100 value 79.889616 final value 79.889616 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 133.798395 iter 10 value 94.655087 iter 20 value 93.977382 iter 30 value 93.074899 iter 40 value 89.423091 iter 50 value 87.319257 iter 60 value 86.723142 iter 70 value 82.306136 iter 80 value 80.011627 iter 90 value 79.661125 iter 100 value 79.395574 final value 79.395574 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 99.387280 final value 94.004423 converged Fitting Repeat 2 # weights: 103 initial value 106.220321 final value 94.054566 converged Fitting Repeat 3 # weights: 103 initial value 107.404511 final value 94.054532 converged Fitting Repeat 4 # weights: 103 initial value 104.689756 iter 10 value 93.921647 iter 20 value 93.916954 iter 30 value 93.699459 iter 40 value 86.919217 iter 50 value 86.273249 iter 60 value 86.272846 iter 70 value 86.272339 iter 80 value 85.891238 iter 90 value 82.635061 iter 100 value 81.568429 final value 81.568429 stopped after 100 iterations Fitting Repeat 5 # weights: 103 initial value 112.780340 iter 10 value 94.055182 final value 94.053163 converged Fitting Repeat 1 # weights: 305 initial value 95.041607 iter 10 value 94.057706 iter 20 value 94.052924 iter 30 value 86.120307 iter 40 value 86.002885 iter 50 value 85.811918 iter 60 value 84.151829 iter 70 value 82.083929 iter 80 value 81.998080 iter 90 value 81.710575 iter 100 value 81.698344 final value 81.698344 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 100.724005 iter 10 value 94.056974 iter 20 value 94.013769 final value 93.915852 converged Fitting Repeat 3 # weights: 305 initial value 98.398526 iter 10 value 94.058854 iter 20 value 94.044385 iter 30 value 84.910452 iter 40 value 82.518620 iter 50 value 79.936506 iter 60 value 79.317220 iter 70 value 79.234698 final value 79.234121 converged Fitting Repeat 4 # weights: 305 initial value 102.447150 iter 10 value 94.057741 iter 20 value 94.046928 iter 30 value 88.726660 iter 40 value 88.250644 iter 50 value 83.321436 iter 60 value 83.319725 iter 70 value 83.319513 iter 80 value 83.284835 final value 83.284797 converged Fitting Repeat 5 # weights: 305 initial value 95.961473 iter 10 value 90.214807 iter 20 value 90.130508 final value 90.129388 converged Fitting Repeat 1 # weights: 507 initial value 99.727557 iter 10 value 93.875598 iter 20 value 93.660689 iter 30 value 93.457376 iter 40 value 93.074051 iter 50 value 91.561579 iter 60 value 83.443364 iter 70 value 80.471668 iter 80 value 79.945221 iter 90 value 79.708882 final value 79.708786 converged Fitting Repeat 2 # weights: 507 initial value 109.483835 iter 10 value 94.062172 iter 20 value 93.527165 iter 30 value 88.001220 iter 40 value 84.915432 iter 50 value 83.917745 iter 60 value 83.914937 iter 70 value 83.357192 final value 83.357184 converged Fitting Repeat 3 # weights: 507 initial value 106.698715 iter 10 value 93.924078 iter 20 value 93.916456 iter 30 value 92.078845 iter 40 value 91.223872 iter 50 value 90.620558 final value 90.162300 converged Fitting Repeat 4 # weights: 507 initial value 95.676716 iter 10 value 93.188903 iter 20 value 93.185905 iter 30 value 89.617342 iter 40 value 88.337856 iter 50 value 87.899053 iter 60 value 87.859491 iter 70 value 86.992122 iter 80 value 86.877205 iter 90 value 86.872560 iter 100 value 86.872049 final value 86.872049 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 109.753340 iter 10 value 93.924254 iter 20 value 93.701089 iter 30 value 87.119641 iter 40 value 86.456320 iter 50 value 86.447700 iter 60 value 85.238151 iter 70 value 84.471176 final value 84.470797 converged Fitting Repeat 1 # weights: 103 initial value 107.088939 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 100.496857 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 103.232811 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 101.164169 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 98.132960 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 115.063573 final value 94.484211 converged Fitting Repeat 2 # weights: 305 initial value 105.306015 iter 10 value 93.017564 iter 20 value 85.158647 iter 30 value 84.876847 iter 40 value 84.717959 iter 50 value 84.578266 iter 60 value 84.575761 final value 84.575742 converged Fitting Repeat 3 # weights: 305 initial value 95.666749 iter 10 value 94.469182 final value 94.423530 converged Fitting Repeat 4 # weights: 305 initial value 97.265591 final value 94.484211 converged Fitting Repeat 5 # weights: 305 initial value 95.518345 final value 94.484211 converged Fitting Repeat 1 # weights: 507 initial value 112.270163 iter 10 value 88.268513 iter 20 value 87.242755 final value 87.242754 converged Fitting Repeat 2 # weights: 507 initial value 100.226179 iter 10 value 89.080657 iter 20 value 86.233078 iter 30 value 86.186813 iter 40 value 86.186670 final value 86.186667 converged Fitting Repeat 3 # weights: 507 initial value 109.443120 final value 94.325945 converged Fitting Repeat 4 # weights: 507 initial value 100.244600 iter 10 value 94.326062 final value 94.325945 converged Fitting Repeat 5 # weights: 507 initial value 101.830102 final value 94.484211 converged Fitting Repeat 1 # weights: 103 initial value 105.336169 iter 10 value 94.523388 iter 20 value 94.486841 iter 30 value 92.200985 iter 40 value 91.361489 iter 50 value 88.128703 iter 60 value 86.838339 iter 70 value 84.991558 iter 80 value 83.776110 iter 90 value 83.095583 iter 100 value 82.337402 final value 82.337402 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 98.679428 iter 10 value 94.487643 iter 20 value 94.415543 iter 30 value 92.034279 iter 40 value 87.554691 iter 50 value 84.357847 iter 60 value 83.638363 iter 70 value 83.474432 iter 80 value 83.317948 iter 90 value 82.901412 iter 100 value 82.291839 final value 82.291839 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 100.734195 iter 10 value 94.487199 iter 20 value 92.903499 iter 30 value 89.490433 iter 40 value 88.838325 iter 50 value 85.854561 iter 60 value 84.688613 iter 70 value 84.202394 iter 80 value 83.813494 iter 90 value 83.433891 final value 83.431341 converged Fitting Repeat 4 # weights: 103 initial value 102.229115 iter 10 value 94.481776 iter 20 value 94.217936 iter 30 value 94.191501 iter 40 value 94.183541 iter 50 value 94.104181 iter 60 value 88.367715 iter 70 value 87.479049 iter 80 value 87.081675 iter 90 value 86.245895 iter 100 value 85.746574 final value 85.746574 stopped after 100 iterations Fitting Repeat 5 # weights: 103 initial value 97.873182 iter 10 value 94.505273 iter 20 value 94.251899 iter 30 value 94.081304 iter 40 value 89.099157 iter 50 value 85.334753 iter 60 value 85.188736 iter 70 value 84.869536 iter 80 value 84.020720 iter 90 value 83.534821 iter 100 value 83.350508 final value 83.350508 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 123.711703 iter 10 value 94.509149 iter 20 value 90.770705 iter 30 value 89.720567 iter 40 value 89.596177 iter 50 value 86.469891 iter 60 value 83.284340 iter 70 value 82.977706 iter 80 value 82.508473 iter 90 value 82.037958 iter 100 value 81.671463 final value 81.671463 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 115.120685 iter 10 value 94.487541 iter 20 value 94.343475 iter 30 value 90.683629 iter 40 value 90.533050 iter 50 value 87.871479 iter 60 value 86.123745 iter 70 value 85.718289 iter 80 value 84.944653 iter 90 value 84.295478 iter 100 value 82.254882 final value 82.254882 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 105.328340 iter 10 value 92.801706 iter 20 value 87.987634 iter 30 value 86.109477 iter 40 value 85.623242 iter 50 value 84.789241 iter 60 value 81.782629 iter 70 value 81.294810 iter 80 value 81.109191 iter 90 value 80.947350 iter 100 value 80.910038 final value 80.910038 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 113.202320 iter 10 value 94.565294 iter 20 value 93.873281 iter 30 value 91.208230 iter 40 value 87.926616 iter 50 value 85.255872 iter 60 value 84.329991 iter 70 value 83.773583 iter 80 value 81.791908 iter 90 value 81.626370 iter 100 value 81.603907 final value 81.603907 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 108.665333 iter 10 value 94.965530 iter 20 value 91.918390 iter 30 value 90.841717 iter 40 value 89.616912 iter 50 value 85.855243 iter 60 value 84.878302 iter 70 value 83.893633 iter 80 value 83.827196 iter 90 value 83.646397 iter 100 value 83.313405 final value 83.313405 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 111.294420 iter 10 value 94.587973 iter 20 value 86.810983 iter 30 value 85.529941 iter 40 value 84.138192 iter 50 value 83.338017 iter 60 value 82.944739 iter 70 value 82.689745 iter 80 value 81.964852 iter 90 value 81.483402 iter 100 value 81.250510 final value 81.250510 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 153.663107 iter 10 value 95.241532 iter 20 value 91.695728 iter 30 value 90.064650 iter 40 value 88.339972 iter 50 value 86.039752 iter 60 value 83.969985 iter 70 value 83.026161 iter 80 value 82.658363 iter 90 value 82.223101 iter 100 value 81.694743 final value 81.694743 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 107.566435 iter 10 value 94.499780 iter 20 value 92.805264 iter 30 value 87.600147 iter 40 value 86.492697 iter 50 value 85.345867 iter 60 value 83.601595 iter 70 value 82.332380 iter 80 value 81.864737 iter 90 value 81.619409 iter 100 value 81.519527 final value 81.519527 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 110.206091 iter 10 value 94.616656 iter 20 value 94.360359 iter 30 value 86.570975 iter 40 value 85.184455 iter 50 value 81.984205 iter 60 value 81.420395 iter 70 value 81.142015 iter 80 value 80.962251 iter 90 value 80.929055 iter 100 value 80.821506 final value 80.821506 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 109.271896 iter 10 value 96.841213 iter 20 value 93.121712 iter 30 value 90.823389 iter 40 value 85.747704 iter 50 value 84.379962 iter 60 value 83.023109 iter 70 value 82.052298 iter 80 value 81.382247 iter 90 value 81.277107 iter 100 value 81.058227 final value 81.058227 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 96.272890 final value 94.485886 converged Fitting Repeat 2 # weights: 103 initial value 104.027791 final value 94.485898 converged Fitting Repeat 3 # weights: 103 initial value 99.140289 iter 10 value 94.486113 iter 20 value 94.173623 iter 30 value 92.944583 iter 40 value 92.919499 iter 50 value 91.119189 iter 60 value 90.495710 iter 70 value 90.405739 iter 80 value 90.381789 iter 90 value 90.370827 iter 100 value 89.894237 final value 89.894237 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 95.077580 final value 94.485763 converged Fitting Repeat 5 # weights: 103 initial value 100.351231 iter 10 value 94.469867 iter 20 value 94.468134 iter 30 value 94.450431 iter 40 value 87.155272 iter 50 value 87.106937 iter 60 value 87.102096 iter 70 value 87.100103 iter 70 value 87.100102 iter 70 value 87.100101 final value 87.100101 converged Fitting Repeat 1 # weights: 305 initial value 125.886672 iter 10 value 94.489533 iter 20 value 94.220547 iter 30 value 84.949809 iter 40 value 84.884786 iter 50 value 84.884344 iter 60 value 84.797241 iter 70 value 84.522090 iter 80 value 84.519548 iter 90 value 84.519090 iter 100 value 84.518725 final value 84.518725 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 96.438989 iter 10 value 94.471418 iter 20 value 94.430153 iter 30 value 86.698515 iter 40 value 86.401575 iter 50 value 86.401447 iter 60 value 86.389489 final value 86.389488 converged Fitting Repeat 3 # weights: 305 initial value 97.634195 iter 10 value 94.064485 iter 20 value 90.846901 iter 30 value 89.375012 iter 40 value 89.344054 iter 50 value 88.524696 final value 88.523834 converged Fitting Repeat 4 # weights: 305 initial value 103.300154 iter 10 value 94.489131 iter 20 value 94.484220 iter 20 value 94.484220 iter 20 value 94.484220 final value 94.484220 converged Fitting Repeat 5 # weights: 305 initial value 97.562544 iter 10 value 94.488554 iter 20 value 93.929577 iter 30 value 84.463829 iter 40 value 84.033132 iter 50 value 84.027604 final value 84.027602 converged Fitting Repeat 1 # weights: 507 initial value 108.135072 iter 10 value 94.491328 iter 20 value 94.323669 iter 30 value 87.931244 iter 40 value 87.885708 iter 50 value 87.051254 iter 60 value 84.049636 iter 70 value 84.024678 iter 80 value 84.022616 iter 90 value 83.984594 iter 100 value 83.976883 final value 83.976883 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 102.983676 iter 10 value 94.489770 iter 20 value 94.474469 iter 30 value 94.466946 iter 40 value 94.241946 iter 50 value 84.815749 iter 60 value 84.763033 iter 70 value 83.467529 iter 80 value 83.077553 iter 90 value 82.587482 iter 100 value 82.501278 final value 82.501278 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 116.283192 iter 10 value 93.743618 iter 20 value 92.888627 iter 30 value 92.869205 final value 92.869082 converged Fitting Repeat 4 # weights: 507 initial value 107.510229 iter 10 value 94.464049 iter 20 value 94.053939 iter 30 value 93.383670 iter 40 value 87.794965 iter 50 value 81.586303 iter 60 value 81.405301 iter 70 value 80.906466 iter 80 value 80.455180 iter 90 value 80.377204 iter 100 value 80.334562 final value 80.334562 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 93.235117 iter 10 value 91.183995 iter 20 value 90.387707 iter 30 value 90.256832 iter 40 value 90.254918 iter 50 value 90.250970 iter 60 value 89.886903 final value 89.853908 converged Fitting Repeat 1 # weights: 103 initial value 94.971422 final value 94.467391 converged Fitting Repeat 2 # weights: 103 initial value 100.152284 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 98.255290 final value 94.467391 converged Fitting Repeat 4 # weights: 103 initial value 97.048210 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 102.574292 iter 10 value 84.000886 iter 20 value 83.291746 final value 83.289849 converged Fitting Repeat 1 # weights: 305 initial value 98.538937 final value 94.467391 converged Fitting Repeat 2 # weights: 305 initial value 105.335023 final value 94.467391 converged Fitting Repeat 3 # weights: 305 initial value 105.212325 final value 94.484211 converged Fitting Repeat 4 # weights: 305 initial value 110.458194 final value 94.484211 converged Fitting Repeat 5 # weights: 305 initial value 96.254752 iter 10 value 93.701645 iter 20 value 93.674331 final value 93.674286 converged Fitting Repeat 1 # weights: 507 initial value 106.247207 final value 94.484211 converged Fitting Repeat 2 # weights: 507 initial value 118.325986 final value 94.484211 converged Fitting Repeat 3 # weights: 507 initial value 123.521976 final value 94.467391 converged Fitting Repeat 4 # weights: 507 initial value 102.470166 iter 10 value 93.016303 final value 93.016092 converged Fitting Repeat 5 # weights: 507 initial value 94.823302 iter 10 value 94.246785 iter 20 value 94.089294 final value 94.089150 converged Fitting Repeat 1 # weights: 103 initial value 102.242570 iter 10 value 94.604599 iter 20 value 94.467067 iter 30 value 93.281315 iter 40 value 93.221303 iter 50 value 93.208318 iter 60 value 88.295499 iter 70 value 87.610687 iter 80 value 87.404689 iter 90 value 87.231970 iter 100 value 86.976525 final value 86.976525 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 99.544510 iter 10 value 94.488798 iter 20 value 90.124898 iter 30 value 85.470319 iter 40 value 85.265635 iter 50 value 83.288343 iter 60 value 82.877789 iter 70 value 82.870095 iter 80 value 82.490962 iter 90 value 82.410881 final value 82.410761 converged Fitting Repeat 3 # weights: 103 initial value 97.715100 iter 10 value 94.489096 iter 20 value 91.787299 iter 30 value 86.878776 iter 40 value 84.031616 iter 50 value 83.791951 iter 60 value 83.597178 iter 70 value 83.302555 iter 80 value 83.186150 final value 83.186123 converged Fitting Repeat 4 # weights: 103 initial value 101.225419 iter 10 value 94.704342 iter 20 value 94.443984 iter 30 value 93.565606 iter 40 value 93.283631 iter 50 value 91.663224 iter 60 value 84.371249 iter 70 value 82.539132 iter 80 value 82.001751 iter 90 value 81.601632 iter 100 value 81.135104 final value 81.135104 stopped after 100 iterations Fitting Repeat 5 # weights: 103 initial value 109.063586 iter 10 value 94.492158 iter 20 value 94.429007 iter 30 value 93.662844 iter 40 value 84.340284 iter 50 value 83.432373 iter 60 value 83.096864 iter 70 value 82.873783 iter 80 value 82.855023 final value 82.853968 converged Fitting Repeat 1 # weights: 305 initial value 104.448576 iter 10 value 94.767943 iter 20 value 94.431991 iter 30 value 91.876726 iter 40 value 87.255069 iter 50 value 86.846169 iter 60 value 86.361329 iter 70 value 86.271883 iter 80 value 86.092432 iter 90 value 84.568350 iter 100 value 82.440551 final value 82.440551 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 108.968476 iter 10 value 94.439810 iter 20 value 93.362475 iter 30 value 92.131902 iter 40 value 86.865257 iter 50 value 82.069393 iter 60 value 80.981588 iter 70 value 80.245339 iter 80 value 80.065485 iter 90 value 79.965715 iter 100 value 79.889136 final value 79.889136 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 111.156221 iter 10 value 87.674453 iter 20 value 83.889366 iter 30 value 83.293744 iter 40 value 82.820588 iter 50 value 82.594138 iter 60 value 82.483271 iter 70 value 82.083602 iter 80 value 80.986900 iter 90 value 80.465725 iter 100 value 80.379992 final value 80.379992 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 119.929130 iter 10 value 94.698223 iter 20 value 88.376422 iter 30 value 87.671370 iter 40 value 87.301008 iter 50 value 84.688369 iter 60 value 82.937303 iter 70 value 81.369333 iter 80 value 81.286990 iter 90 value 81.162228 iter 100 value 81.128878 final value 81.128878 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 109.274878 iter 10 value 94.317090 iter 20 value 93.755166 iter 30 value 93.083307 iter 40 value 86.466591 iter 50 value 83.647294 iter 60 value 83.391999 iter 70 value 82.383698 iter 80 value 80.898693 iter 90 value 80.333054 iter 100 value 80.098992 final value 80.098992 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 105.889582 iter 10 value 94.655111 iter 20 value 93.221320 iter 30 value 90.952828 iter 40 value 84.021938 iter 50 value 83.012743 iter 60 value 82.905209 iter 70 value 82.586830 iter 80 value 82.196097 iter 90 value 81.265151 iter 100 value 80.991176 final value 80.991176 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 110.418414 iter 10 value 94.506235 iter 20 value 92.988885 iter 30 value 87.332891 iter 40 value 85.438375 iter 50 value 82.038471 iter 60 value 80.238992 iter 70 value 79.756507 iter 80 value 79.257786 iter 90 value 79.165539 iter 100 value 79.088460 final value 79.088460 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 114.069242 iter 10 value 94.999697 iter 20 value 94.419249 iter 30 value 89.494273 iter 40 value 83.787242 iter 50 value 82.468190 iter 60 value 81.602557 iter 70 value 81.169259 iter 80 value 79.984695 iter 90 value 79.532545 iter 100 value 79.329462 final value 79.329462 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 144.156355 iter 10 value 93.793729 iter 20 value 93.303243 iter 30 value 92.894334 iter 40 value 90.933909 iter 50 value 83.201871 iter 60 value 81.441440 iter 70 value 80.701017 iter 80 value 80.248139 iter 90 value 79.972760 iter 100 value 79.682138 final value 79.682138 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 108.649107 iter 10 value 94.576964 iter 20 value 94.140590 iter 30 value 90.853278 iter 40 value 86.500636 iter 50 value 83.603562 iter 60 value 81.496888 iter 70 value 80.716101 iter 80 value 79.956314 iter 90 value 79.630357 iter 100 value 79.480571 final value 79.480571 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 98.300061 final value 94.485507 converged Fitting Repeat 2 # weights: 103 initial value 102.386380 final value 94.486023 converged Fitting Repeat 3 # weights: 103 initial value 98.630965 final value 94.485800 converged Fitting Repeat 4 # weights: 103 initial value 98.715147 final value 94.485763 converged Fitting Repeat 5 # weights: 103 initial value 95.540125 final value 94.485907 converged Fitting Repeat 1 # weights: 305 initial value 101.754359 iter 10 value 94.471788 iter 20 value 94.467446 final value 94.467406 converged Fitting Repeat 2 # weights: 305 initial value 97.851899 iter 10 value 94.488370 iter 20 value 93.598512 iter 30 value 93.035703 iter 40 value 93.024984 iter 50 value 93.024087 iter 60 value 92.969896 iter 70 value 92.738512 iter 80 value 92.737920 iter 90 value 92.736950 iter 100 value 92.736708 final value 92.736708 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 95.982239 iter 10 value 94.489018 iter 20 value 92.204375 iter 30 value 90.522898 iter 40 value 90.497455 iter 50 value 90.497120 iter 60 value 90.496628 iter 70 value 90.496455 iter 80 value 85.706462 iter 90 value 83.014192 iter 100 value 81.886058 final value 81.886058 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 96.888949 iter 10 value 94.489114 iter 20 value 94.479438 iter 30 value 87.819822 iter 40 value 86.964307 iter 50 value 85.770233 iter 60 value 84.710764 iter 70 value 83.981655 iter 80 value 83.931982 iter 90 value 82.307623 iter 100 value 81.201373 final value 81.201373 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 102.996495 iter 10 value 94.472170 iter 20 value 94.468267 iter 30 value 94.467409 final value 94.467405 converged Fitting Repeat 1 # weights: 507 initial value 94.582998 final value 94.492809 converged Fitting Repeat 2 # weights: 507 initial value 113.493436 iter 10 value 94.492381 iter 20 value 94.078647 iter 30 value 89.502898 iter 40 value 89.331673 iter 50 value 88.305963 iter 60 value 88.303615 iter 60 value 88.303615 final value 88.303615 converged Fitting Repeat 3 # weights: 507 initial value 126.328052 iter 10 value 94.492021 iter 20 value 94.286296 iter 30 value 91.768896 iter 40 value 91.466534 iter 50 value 91.444066 iter 60 value 88.656034 iter 70 value 86.159627 iter 80 value 84.308172 iter 90 value 83.284213 iter 100 value 83.275814 final value 83.275814 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 104.438041 iter 10 value 94.476191 iter 20 value 93.201618 iter 30 value 92.957037 iter 40 value 92.956524 iter 50 value 92.956205 iter 60 value 92.923861 iter 70 value 84.909788 iter 80 value 84.894486 iter 90 value 84.281641 iter 100 value 84.246574 final value 84.246574 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 96.655082 iter 10 value 87.525912 iter 20 value 84.919321 iter 30 value 84.587638 iter 40 value 84.584251 iter 50 value 82.579889 iter 60 value 81.942570 iter 70 value 81.853014 iter 80 value 81.762834 iter 90 value 81.762322 final value 81.762278 converged Fitting Repeat 1 # weights: 103 initial value 106.387271 final value 94.052910 converged Fitting Repeat 2 # weights: 103 initial value 94.471463 final value 94.052910 converged Fitting Repeat 3 # weights: 103 initial value 96.684791 final value 94.052910 converged Fitting Repeat 4 # weights: 103 initial value 106.041618 final value 94.052910 converged Fitting Repeat 5 # weights: 103 initial value 95.280364 final value 94.052910 converged Fitting Repeat 1 # weights: 305 initial value 112.134563 iter 10 value 93.907062 final value 93.904720 converged Fitting Repeat 2 # weights: 305 initial value 97.958525 final value 94.052910 converged Fitting Repeat 3 # weights: 305 initial value 99.862747 iter 10 value 93.225585 iter 20 value 93.012279 iter 30 value 92.956644 final value 92.956640 converged Fitting Repeat 4 # weights: 305 initial value 102.904623 final value 94.052910 converged Fitting Repeat 5 # weights: 305 initial value 95.520530 final value 94.052902 converged Fitting Repeat 1 # weights: 507 initial value 106.555047 iter 10 value 93.937271 iter 20 value 93.302565 iter 30 value 93.300441 final value 93.300433 converged Fitting Repeat 2 # weights: 507 initial value 99.922024 iter 10 value 93.690084 final value 93.672973 converged Fitting Repeat 3 # weights: 507 initial value 129.290006 iter 10 value 85.046970 iter 20 value 84.591420 iter 30 value 84.583113 final value 84.577375 converged Fitting Repeat 4 # weights: 507 initial value 112.943585 iter 10 value 92.746246 iter 20 value 92.644560 final value 92.644454 converged Fitting Repeat 5 # weights: 507 initial value 102.953775 final value 94.052910 converged Fitting Repeat 1 # weights: 103 initial value 130.111675 iter 10 value 93.984883 iter 20 value 86.966853 iter 30 value 84.680423 iter 40 value 83.858893 iter 50 value 83.069372 iter 60 value 82.915233 iter 70 value 82.850729 final value 82.850544 converged Fitting Repeat 2 # weights: 103 initial value 101.646282 iter 10 value 93.962377 iter 20 value 92.490340 iter 30 value 92.185096 iter 40 value 92.107572 iter 50 value 92.075598 iter 60 value 92.063920 iter 70 value 92.017078 iter 80 value 91.969244 iter 90 value 84.568700 iter 100 value 84.389969 final value 84.389969 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 102.288437 iter 10 value 93.922991 iter 20 value 86.493072 iter 30 value 86.072166 iter 40 value 85.264586 iter 50 value 84.272617 iter 60 value 83.852608 iter 70 value 83.850496 final value 83.850427 converged Fitting Repeat 4 # weights: 103 initial value 98.715832 iter 10 value 94.100496 iter 20 value 93.671552 iter 30 value 92.704745 iter 40 value 85.863595 iter 50 value 85.657048 iter 60 value 85.353205 iter 70 value 84.621931 iter 80 value 83.618036 iter 90 value 83.404515 iter 100 value 83.402053 final value 83.402053 stopped after 100 iterations Fitting Repeat 5 # weights: 103 initial value 97.240962 iter 10 value 94.044337 iter 20 value 86.405697 iter 30 value 84.775895 iter 40 value 83.726675 iter 50 value 83.057132 iter 60 value 82.783497 iter 70 value 82.741749 iter 80 value 82.718517 iter 90 value 82.652080 iter 100 value 82.620307 final value 82.620307 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 105.888488 iter 10 value 94.665396 iter 20 value 94.072181 iter 30 value 94.060733 iter 40 value 90.522011 iter 50 value 86.503492 iter 60 value 85.381790 iter 70 value 84.426903 iter 80 value 84.084532 iter 90 value 83.981192 iter 100 value 83.866376 final value 83.866376 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 109.915982 iter 10 value 94.175510 iter 20 value 94.047757 iter 30 value 87.201505 iter 40 value 86.000179 iter 50 value 84.665234 iter 60 value 84.451330 iter 70 value 82.804108 iter 80 value 81.919507 iter 90 value 80.510922 iter 100 value 80.171728 final value 80.171728 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 115.188611 iter 10 value 94.141885 iter 20 value 93.654262 iter 30 value 87.140282 iter 40 value 86.588189 iter 50 value 85.557519 iter 60 value 84.555976 iter 70 value 83.582879 iter 80 value 83.373679 iter 90 value 83.320621 iter 100 value 82.060392 final value 82.060392 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 100.513575 iter 10 value 94.791805 iter 20 value 93.451838 iter 30 value 87.947286 iter 40 value 86.079199 iter 50 value 84.782003 iter 60 value 84.376126 iter 70 value 83.608391 iter 80 value 83.390665 iter 90 value 83.348345 iter 100 value 83.025630 final value 83.025630 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 106.500619 iter 10 value 87.970312 iter 20 value 86.787952 iter 30 value 85.468724 iter 40 value 84.667649 iter 50 value 84.227436 iter 60 value 82.980544 iter 70 value 81.241145 iter 80 value 80.427610 iter 90 value 80.227107 iter 100 value 80.109484 final value 80.109484 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 103.359664 iter 10 value 94.134807 iter 20 value 86.019294 iter 30 value 85.279791 iter 40 value 84.165676 iter 50 value 82.969300 iter 60 value 82.627098 iter 70 value 82.045699 iter 80 value 80.715506 iter 90 value 80.354105 iter 100 value 80.314753 final value 80.314753 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 106.965938 iter 10 value 94.926679 iter 20 value 93.524005 iter 30 value 92.489539 iter 40 value 87.581855 iter 50 value 83.072590 iter 60 value 81.872955 iter 70 value 81.474592 iter 80 value 80.983631 iter 90 value 80.379769 iter 100 value 80.222841 final value 80.222841 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 102.988392 iter 10 value 92.793297 iter 20 value 91.997677 iter 30 value 91.827843 iter 40 value 91.699614 iter 50 value 91.573647 iter 60 value 88.557004 iter 70 value 85.126867 iter 80 value 83.733335 iter 90 value 83.208845 iter 100 value 83.098828 final value 83.098828 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 126.276445 iter 10 value 93.945852 iter 20 value 86.509067 iter 30 value 84.334661 iter 40 value 82.482119 iter 50 value 81.211618 iter 60 value 80.493627 iter 70 value 80.016156 iter 80 value 79.811394 iter 90 value 79.691132 iter 100 value 79.626281 final value 79.626281 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 110.619480 iter 10 value 94.818229 iter 20 value 94.427652 iter 30 value 91.799580 iter 40 value 88.193200 iter 50 value 84.035249 iter 60 value 81.637271 iter 70 value 81.166790 iter 80 value 80.474559 iter 90 value 80.262159 iter 100 value 80.228885 final value 80.228885 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 97.010071 iter 10 value 94.054813 iter 20 value 92.803202 iter 30 value 91.947865 iter 40 value 91.944534 iter 50 value 91.944367 iter 50 value 91.944367 iter 50 value 91.944367 final value 91.944367 converged Fitting Repeat 2 # weights: 103 initial value 95.687887 final value 94.054658 converged Fitting Repeat 3 # weights: 103 initial value 97.241729 iter 10 value 93.906399 iter 20 value 93.195563 iter 30 value 91.946222 iter 40 value 91.944471 iter 50 value 85.300784 iter 60 value 82.969721 iter 70 value 82.724601 iter 80 value 82.623444 final value 82.622048 converged Fitting Repeat 4 # weights: 103 initial value 97.014256 final value 94.054239 converged Fitting Repeat 5 # weights: 103 initial value 101.082307 iter 10 value 94.054372 iter 20 value 94.052968 final value 94.052914 converged Fitting Repeat 1 # weights: 305 initial value 102.667829 iter 10 value 94.057730 iter 20 value 93.933968 iter 30 value 93.500142 final value 93.492073 converged Fitting Repeat 2 # weights: 305 initial value 97.019300 iter 10 value 88.125082 iter 20 value 83.845914 iter 30 value 83.812499 final value 83.812252 converged Fitting Repeat 3 # weights: 305 initial value 106.653988 iter 10 value 94.058174 iter 20 value 94.052982 iter 30 value 92.671433 iter 40 value 84.298251 iter 50 value 82.297442 iter 60 value 80.646892 iter 70 value 79.081649 iter 80 value 78.552946 iter 90 value 78.533495 iter 100 value 78.525263 final value 78.525263 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 106.959826 iter 10 value 94.055943 iter 20 value 92.825983 iter 30 value 91.610753 iter 40 value 91.540591 iter 50 value 91.493476 final value 91.493459 converged Fitting Repeat 5 # weights: 305 initial value 101.853811 iter 10 value 94.057787 iter 20 value 93.966552 iter 30 value 93.587448 iter 40 value 93.582800 final value 93.582710 converged Fitting Repeat 1 # weights: 507 initial value 95.068295 iter 10 value 93.682003 iter 20 value 93.676768 iter 30 value 93.562479 iter 40 value 93.561804 iter 50 value 87.415403 iter 60 value 86.497064 iter 70 value 86.357404 iter 80 value 86.352788 iter 90 value 86.263085 iter 90 value 86.263085 iter 90 value 86.263084 final value 86.263084 converged Fitting Repeat 2 # weights: 507 initial value 127.316802 iter 10 value 93.577865 iter 20 value 93.572856 iter 30 value 93.571066 iter 40 value 86.649001 iter 50 value 85.697543 iter 60 value 85.582205 iter 70 value 84.498445 final value 84.442625 converged Fitting Repeat 3 # weights: 507 initial value 113.377651 iter 10 value 94.060395 iter 20 value 94.028971 iter 30 value 93.673302 iter 30 value 93.673302 iter 30 value 93.673302 final value 93.673302 converged Fitting Repeat 4 # weights: 507 initial value 99.349506 iter 10 value 94.061856 iter 20 value 93.602757 iter 30 value 93.536256 iter 40 value 91.557116 iter 50 value 83.721495 iter 60 value 82.436400 iter 70 value 82.329674 iter 80 value 82.323592 iter 90 value 82.319963 final value 82.258237 converged Fitting Repeat 5 # weights: 507 initial value 95.027773 iter 10 value 93.681533 iter 20 value 93.677941 iter 30 value 93.574652 iter 40 value 93.559258 iter 50 value 93.559108 final value 93.558997 converged Fitting Repeat 1 # weights: 305 initial value 153.999022 iter 10 value 117.764022 iter 20 value 117.759741 final value 117.759024 converged Fitting Repeat 2 # weights: 305 initial value 120.833133 iter 10 value 117.895313 iter 20 value 117.890604 iter 30 value 115.387940 iter 40 value 107.010215 iter 50 value 107.004155 final value 107.004148 converged Fitting Repeat 3 # weights: 305 initial value 120.678648 iter 10 value 117.894156 iter 20 value 117.648230 final value 117.549863 converged Fitting Repeat 4 # weights: 305 initial value 123.780736 iter 10 value 117.894896 iter 20 value 117.890307 iter 30 value 117.682482 iter 40 value 107.004994 iter 50 value 107.003609 iter 60 value 106.838811 iter 70 value 106.655627 iter 80 value 106.647799 iter 90 value 106.647676 iter 100 value 105.019331 final value 105.019331 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 123.446092 iter 10 value 117.732823 iter 20 value 117.730806 iter 30 value 117.595069 iter 40 value 117.594756 iter 50 value 117.500072 final value 117.500066 converged svmRadial ranger Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases RUNIT TEST PROTOCOL -- Thu May 2 05:59:01 2024 *********************************************** Number of test functions: 7 Number of errors: 0 Number of failures: 0 1 Test Suite : HPiP RUnit Tests - 7 test functions, 0 errors, 0 failures Number of test functions: 7 Number of errors: 0 Number of failures: 0 Warning messages: 1: `repeats` has no meaning for this resampling method. 2: executing %dopar% sequentially: no parallel backend registered > > > > > proc.time() user system elapsed 72.234 2.265 89.127
HPiP.Rcheck/HPiP-Ex.timings
name | user | system | elapsed | |
FSmethod | 51.168 | 1.875 | 62.185 | |
FreqInteractors | 0.508 | 0.033 | 0.649 | |
calculateAAC | 0.077 | 0.016 | 0.109 | |
calculateAutocor | 0.863 | 0.104 | 1.141 | |
calculateCTDC | 0.160 | 0.010 | 0.196 | |
calculateCTDD | 1.327 | 0.039 | 1.582 | |
calculateCTDT | 0.450 | 0.012 | 0.524 | |
calculateCTriad | 0.821 | 0.040 | 0.986 | |
calculateDC | 0.261 | 0.028 | 0.314 | |
calculateF | 0.752 | 0.018 | 0.871 | |
calculateKSAAP | 0.294 | 0.024 | 0.359 | |
calculateQD_Sm | 3.659 | 0.178 | 4.387 | |
calculateTC | 4.879 | 0.464 | 6.271 | |
calculateTC_Sm | 0.554 | 0.026 | 0.645 | |
corr_plot | 51.678 | 1.992 | 64.682 | |
enrichfindP | 0.919 | 0.089 | 14.017 | |
enrichfind_hp | 0.142 | 0.026 | 1.230 | |
enrichplot | 0.854 | 0.016 | 1.018 | |
filter_missing_values | 0.002 | 0.001 | 0.007 | |
getFASTA | 0.122 | 0.018 | 3.741 | |
getHPI | 0.001 | 0.001 | 0.002 | |
get_negativePPI | 0.003 | 0.001 | 0.004 | |
get_positivePPI | 0.000 | 0.000 | 0.001 | |
impute_missing_data | 0.002 | 0.001 | 0.004 | |
plotPPI | 0.140 | 0.005 | 0.187 | |
pred_ensembel | 25.036 | 0.527 | 26.456 | |
var_imp | 53.505 | 1.954 | 67.054 | |