Back to Multiple platform build/check report for BioC 3.12
A[B]CDEFGHIJKLMNOPQRSTUVWXYZ

INSTALL report for BUS on tokay1

This page was generated on 2020-08-12 11:38:38 -0400 (Wed, 12 Aug 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE BUS PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 209/1885HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
BUS 1.45.0
Yuanhua Liu
Snapshot Date: 2020-08-11 14:50:16 -0400 (Tue, 11 Aug 2020)
URL: https://git.bioconductor.org/packages/BUS
Branch: master
Last Commit: 91dd3f0
Last Changed Date: 2020-04-27 14:19:39 -0400 (Mon, 27 Apr 2020)
malbec1 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
nebbiolo1 Linux (Ubuntu 20.04.1 LTS) / x86_64  OK  OK  OK 
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida1 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: BUS
Version: 1.45.0
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.12/bioc/src/contrib/BUS_1.45.0.tar.gz && rm -rf BUS.buildbin-libdir && mkdir BUS.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BUS.buildbin-libdir BUS_1.45.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL BUS_1.45.0.zip && rm BUS_1.45.0.tar.gz BUS_1.45.0.zip
StartedAt: 2020-08-11 16:36:09 -0400 (Tue, 11 Aug 2020)
EndedAt: 2020-08-11 16:36:41 -0400 (Tue, 11 Aug 2020)
EllapsedTime: 31.2 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.12/bioc/src/contrib/BUS_1.45.0.tar.gz && rm -rf BUS.buildbin-libdir && mkdir BUS.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BUS.buildbin-libdir BUS_1.45.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL BUS_1.45.0.zip && rm BUS_1.45.0.tar.gz BUS_1.45.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 1683k  100 1683k    0     0  14.9M      0 --:--:-- --:--:-- --:--:-- 15.5M

install for i386

* installing *source* package 'BUS' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c BUS.cpp -o BUS.o
C:/rtools40/mingw32/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o BUS.dll tmp.def BUS.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.12-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.12-bioc/meat/BUS.buildbin-libdir/00LOCK-BUS/00new/BUS/libs/i386
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'BUS'
    finding HTML links ... done
    BUS-package                             html  
    BUS                                     html  
    copasi                                  html  
    gene.pvalue                             html  
    gene.similarity                         html  
    gene.trait.pvalue                       html  
    gene.trait.similarity                   html  
    pred.network                            html  
    tumors.mRNA                             html  
    tumors.miRNA                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'BUS' ...
** libs
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c BUS.cpp -o BUS.o
C:/rtools40/mingw64/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o BUS.dll tmp.def BUS.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.12-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.12-bioc/meat/BUS.buildbin-libdir/BUS/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'BUS' as BUS_1.45.0.zip
* DONE (BUS)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'BUS' successfully unpacked and MD5 sums checked