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INSTALL report for ABSSeq on tokay1

This page was generated on 2020-09-21 11:12:31 -0400 (Mon, 21 Sep 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE ABSSeq PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 10/1912HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ABSSeq 1.43.0
Wentao Yang
Snapshot Date: 2020-09-20 14:41:51 -0400 (Sun, 20 Sep 2020)
URL: https://git.bioconductor.org/packages/ABSSeq
Branch: master
Last Commit: 2181a4f
Last Changed Date: 2020-04-27 14:39:30 -0400 (Mon, 27 Apr 2020)
malbec1 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
nebbiolo1 Linux (Ubuntu 20.04.1 LTS) / x86_64  OK  OK  OK 
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
riesling1 Windows Server 2019 Standard / x64  OK  OK  OK  OK 
merida1 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: ABSSeq
Version: 1.43.0
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.12/bioc/src/contrib/ABSSeq_1.43.0.tar.gz && rm -rf ABSSeq.buildbin-libdir && mkdir ABSSeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ABSSeq.buildbin-libdir ABSSeq_1.43.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL ABSSeq_1.43.0.zip && rm ABSSeq_1.43.0.tar.gz ABSSeq_1.43.0.zip
StartedAt: 2020-09-20 17:31:49 -0400 (Sun, 20 Sep 2020)
EndedAt: 2020-09-20 17:32:18 -0400 (Sun, 20 Sep 2020)
EllapsedTime: 28.4 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.12/bioc/src/contrib/ABSSeq_1.43.0.tar.gz && rm -rf ABSSeq.buildbin-libdir && mkdir ABSSeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ABSSeq.buildbin-libdir ABSSeq_1.43.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL ABSSeq_1.43.0.zip && rm ABSSeq_1.43.0.tar.gz ABSSeq_1.43.0.zip
###
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100  223k  100  223k    0     0  6369k      0 --:--:-- --:--:-- --:--:-- 7214k

install for i386

* installing *source* package 'ABSSeq' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'ABSSeq'
    finding HTML links ... done
    ABSDataSet                              html  
    ABSSeq                                  html  
    ABSSeqlm                                html  
    LevelstoNormFC                          html  
    ReplaceOutliersByMAD                    html  
    aFoldcomplexDesign                      html  
    callDEs                                 html  
    callParameter                           html  
    callParameterwithoutReplicates          html  
    counts                                  html  
    estimateSizeFactorsForMatrix            html  
    excounts                                html  
    genAFold                                html  
    groups                                  html  
    maxRates                                html  
    minRates                                html  
    minimalDispersion                       html  
    normMethod                              html  
    normalFactors                           html  
    paired                                  html  
    plotDifftoBase                          html  
    qtotalNormalized                        html  
    results                                 html  
    sFactors                                html  
    simuN5                                  html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'ABSSeq' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ABSSeq' as ABSSeq_1.43.0.zip
* DONE (ABSSeq)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'ABSSeq' successfully unpacked and MD5 sums checked