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This page was generated on 2024-02-22 12:48:39 -0500 (Thu, 22 Feb 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.3 LTS)x86_64R Under development (unstable) (2024-01-16 r85808) -- "Unsuffered Consequences" 4657
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2024-01-14 r85805 ucrt) -- "Unsuffered Consequences" 4397
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 985/2244HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
iChip 1.57.0  (landing page)
Qianxing Mo
Snapshot Date: 2024-02-21 14:10:10 -0500 (Wed, 21 Feb 2024)
git_url: https://git.bioconductor.org/packages/iChip
git_branch: devel
git_last_commit: 49c678c
git_last_commit_date: 2023-10-24 09:43:17 -0500 (Tue, 24 Oct 2023)
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

BUILD BIN results for iChip on palomino3


To the developers/maintainers of the iChip package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/iChip.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: iChip
Version: 1.57.0
Command: rm -rf iChip.buildbin-libdir && mkdir iChip.buildbin-libdir && F:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD INSTALL --build --library=iChip.buildbin-libdir iChip_1.57.0.tar.gz
StartedAt: 2024-02-22 10:19:09 -0500 (Thu, 22 Feb 2024)
EndedAt: 2024-02-22 10:19:18 -0500 (Thu, 22 Feb 2024)
EllapsedTime: 9.6 seconds
RetCode: 0
Status:   OK  
PackageFile: iChip_1.57.0.zip
PackageFileSize: 1.823 MiB

Command output

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### Running command:
###
###   rm -rf iChip.buildbin-libdir && mkdir iChip.buildbin-libdir && F:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD INSTALL --build --library=iChip.buildbin-libdir iChip_1.57.0.tar.gz
###
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* installing *source* package 'iChip' ...
** using staged installation
** libs
using C compiler: 'gcc.exe (GCC) 12.3.0'
gcc  -I"F:/biocbuild/bbs-3.19-bioc/R/include" -DNDEBUG     -I"C:/rtools43/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c iChip.c -o iChip.o
iChip.c: In function 'iChip2':
iChip.c:23:51: warning: variable 'nrowm1' set but not used [-Wunused-but-set-variable]
   23 |   int sampleSize,LB,RB,i,j,r,nnoise,nsignal,state,nrowm1,wtsum;
      |                                                   ^~~~~~
gcc  -I"F:/biocbuild/bbs-3.19-bioc/R/include" -DNDEBUG     -I"C:/rtools43/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c registerDynamicSymbol.c -o registerDynamicSymbol.o
gcc -shared -s -static-libgcc -o iChip.dll tmp.def iChip.o registerDynamicSymbol.o -LC:/rtools43/x86_64-w64-mingw32.static.posix/lib/x64 -LC:/rtools43/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.19-bioc/R/bin/x64 -lR
installing to F:/biocbuild/bbs-3.19-bioc/meat/iChip.buildbin-libdir/00LOCK-iChip/00new/iChip/libs/x64
** R
** data
*** moving datasets to lazyload DB
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'iChip' as iChip_1.57.0.zip
* DONE (iChip)