Aaron Taudt
| Snapshot Date: 2023-12-06 14:00:17 -0500 (Wed, 06 Dec 2023) |
| git_url: https://git.bioconductor.org/packages/chromstaR |
| git_branch: devel |
| git_last_commit: 1a8d1f3 |
| git_last_commit_date: 2023-10-24 10:51:00 -0500 (Tue, 24 Oct 2023) |
| Back to Multiple platform build/check report for BioC 3.19: simplified long |
|
This page was generated on 2023-12-07 12:27:16 -0500 (Thu, 07 Dec 2023).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 22.04.2 LTS) | x86_64 | R Under development (unstable) (2023-11-11 r85510) -- "Unsuffered Consequences" | 4609 |
| palomino3 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2023-11-14 r85524 ucrt) -- "Unsuffered Consequences" | 4369 |
| merida1 | macOS 12.7.1 Monterey | x86_64 | R Under development (unstable) (2023-11-11 r85510) -- "Unsuffered Consequences" | 4375 |
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) | aarch64 | R Under development (unstable) (2023-11-01 r85459) -- "Unsuffered Consequences" | 4262 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 343/2229 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| chromstaR 1.29.0 (landing page) Aaron Taudt
| nebbiolo1 | Linux (Ubuntu 22.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||||
| palomino3 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 12.7.1 Monterey / x86_64 | OK | OK | OK | OK | | ||||||||
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) / aarch64 | OK | ERROR | skipped | ||||||||||
|
To the developers/maintainers of the chromstaR package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/chromstaR.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. - See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host. |
| Package: chromstaR |
| Version: 1.29.0 |
| Command: /home/biocbuild/R/R-4.4-devel-2023.11.02/bin/R CMD build --keep-empty-dirs --no-resave-data chromstaR |
| StartedAt: 2023-12-06 22:20:30 -0000 (Wed, 06 Dec 2023) |
| EndedAt: 2023-12-06 22:26:41 -0000 (Wed, 06 Dec 2023) |
| EllapsedTime: 371.1 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
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### Running command:
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### /home/biocbuild/R/R-4.4-devel-2023.11.02/bin/R CMD build --keep-empty-dirs --no-resave-data chromstaR
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* checking for file ‘chromstaR/DESCRIPTION’ ... OK
* preparing ‘chromstaR’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘chromstaR.Rnw’ using knitr
Error: processing vignette 'chromstaR.Rnw' failed with diagnostics:
Running 'texi2dvi' on 'chromstaR.tex' failed.
LaTeX errors:
! LaTeX Error: Unknown graphics extension: .2-1.
See the LaTeX manual or LaTeX Companion for explanation.
Type H <return> for immediate help.
...
! Emergency stop.
...
l.311 ...th]{figure/univariate_braod_H4K20me1.2-1}
\end{adjustwidth}
! ==> Fatal error occurred, no output PDF file produced!
--- failed re-building ‘chromstaR.Rnw’
SUMMARY: processing the following file failed:
‘chromstaR.Rnw’
Error: Vignette re-building failed.
Execution halted