Back to Multiple platform build/check report for BioC 3.17
ABCDEFGHIJKLMNOPQR[S]TUVWXYZ

This page was generated on 2022-11-29 11:10:41 -0500 (Tue, 29 Nov 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.1 LTS)x86_64R Under development (unstable) (2022-10-25 r83175) -- "Unsuffered Consequences" 4462
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2022-10-11 r83083 ucrt) -- "Unsuffered Consequences" 4201
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-11-13 r83342) -- "Unsuffered Consequences" 4231
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for SpatialDecon on merida1


To the developers/maintainers of the SpatialDecon package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/SpatialDecon.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1904/2154HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SpatialDecon 1.9.0  (landing page)
Maddy Griswold
Snapshot Date: 2022-11-28 14:00:12 -0500 (Mon, 28 Nov 2022)
git_url: https://git.bioconductor.org/packages/SpatialDecon
git_branch: master
git_last_commit: 3430c17
git_last_commit_date: 2022-11-01 11:23:08 -0500 (Tue, 01 Nov 2022)
nebbiolo1Linux (Ubuntu 22.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  NO, package depends on 'GeomxTools' which is not available
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  NO, package depends on 'GeomxTools' which is not available

Summary

Package: SpatialDecon
Version: 1.9.0
Command: rm -rf SpatialDecon.buildbin-libdir && mkdir SpatialDecon.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh SpatialDecon_1.9.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R SpatialDecon.buildbin-libdir
StartedAt: 2022-11-29 09:29:22 -0500 (Tue, 29 Nov 2022)
EndedAt: 2022-11-29 09:30:44 -0500 (Tue, 29 Nov 2022)
EllapsedTime: 82.0 seconds
RetCode: 0
Status:   OK  
PackageFile: SpatialDecon_1.9.0.tgz
PackageFileSize: 4.147 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf SpatialDecon.buildbin-libdir && mkdir SpatialDecon.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh SpatialDecon_1.9.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R SpatialDecon.buildbin-libdir
###
##############################################################################
##############################################################################


>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=SpatialDecon.buildbin-libdir SpatialDecon_1.9.0.tar.gz'
>>>>>>> 

* installing *source* package ‘SpatialDecon’ ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (SpatialDecon)