| Back to Multiple platform build/check report for BioC 3.17: simplified long |
|
This page was generated on 2023-09-23 11:35:10 -0400 (Sat, 23 Sep 2023).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 22.04.2 LTS) | x86_64 | 4.3.1 (2023-06-16) -- "Beagle Scouts" | 4625 |
| palomino3 | Windows Server 2022 Datacenter | x64 | 4.3.1 (2023-06-16 ucrt) -- "Beagle Scouts" | 4378 |
| merida1 | macOS 12.6.4 Monterey | x86_64 | 4.3.1 (2023-06-16) -- "Beagle Scouts" | 4394 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1297/2230 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| MsBackendRawFileReader 1.6.0 (landing page) Christian Panse
| nebbiolo1 | Linux (Ubuntu 22.04.2 LTS) / x86_64 | OK | OK | OK |  | ||||||||
| palomino3 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 12.6.4 Monterey / x86_64 | OK | OK | OK | OK | | ||||||||
|
To the developers/maintainers of the MsBackendRawFileReader package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/MsBackendRawFileReader.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: MsBackendRawFileReader |
| Version: 1.6.0 |
| Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD check --install=check:MsBackendRawFileReader.install-out.txt --library=/home/biocbuild/bbs-3.17-bioc/R/site-library --timings MsBackendRawFileReader_1.6.0.tar.gz |
| StartedAt: 2023-09-22 23:25:51 -0400 (Fri, 22 Sep 2023) |
| EndedAt: 2023-09-22 23:30:46 -0400 (Fri, 22 Sep 2023) |
| EllapsedTime: 294.8 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: MsBackendRawFileReader.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD check --install=check:MsBackendRawFileReader.install-out.txt --library=/home/biocbuild/bbs-3.17-bioc/R/site-library --timings MsBackendRawFileReader_1.6.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.17-bioc/meat/MsBackendRawFileReader.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 11.3.0-1ubuntu1~22.04.1) 11.3.0
GNU Fortran (Ubuntu 11.3.0-1ubuntu1~22.04.1) 11.3.0
* running under: Ubuntu 22.04.3 LTS
* using session charset: UTF-8
* checking for file ‘MsBackendRawFileReader/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘MsBackendRawFileReader’ version ‘1.6.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘MsBackendRawFileReader’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking startup messages can be suppressed ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
ioBenchmark 40.777 4.318 12.210
MsBackendRawFileReader 5.262 1.387 5.838
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ...
‘MsBackendRawFileReader.Rmd’ using ‘UTF-8’... OK
NONE
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: OK
MsBackendRawFileReader.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD INSTALL MsBackendRawFileReader ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.17-bioc/R/site-library’ * installing *source* package ‘MsBackendRawFileReader’ ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MsBackendRawFileReader)
MsBackendRawFileReader.Rcheck/tests/testthat.Rout
R version 4.3.1 (2023-06-16) -- "Beagle Scouts"
Copyright (C) 2023 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library("testthat")
> library("MsBackendRawFileReader")
Loading required package: Spectra
Loading required package: S4Vectors
Loading required package: stats4
Loading required package: BiocGenerics
Attaching package: 'BiocGenerics'
The following objects are masked from 'package:stats':
IQR, mad, sd, var, xtabs
The following objects are masked from 'package:base':
Filter, Find, Map, Position, Reduce, anyDuplicated, aperm, append,
as.data.frame, basename, cbind, colnames, dirname, do.call,
duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted,
lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin,
pmin.int, rank, rbind, rownames, sapply, setdiff, sort, table,
tapply, union, unique, unsplit, which.max, which.min
Attaching package: 'S4Vectors'
The following object is masked from 'package:utils':
findMatches
The following objects are masked from 'package:base':
I, expand.grid, unname
Loading required package: BiocParallel
Loading required package: ProtGenerics
Attaching package: 'ProtGenerics'
The following object is masked from 'package:stats':
smooth
> library("Spectra")
>
>
> sample_raw_file <- file.path(system.file(package = "rawrr"),
+ 'extdata', 'sample.raw')
>
> sample_mzXML_file <- file.path(path.package(package = 'MsBackendRawFileReader'),
+ 'extdata', 'sample.mzXML')
>
>
> sample_raw <- backendInitialize(MsBackendRawFileReader::MsBackendRawFileReader(), files = sample_raw_file)
>
>
> #sample_mzr <- backendInitialize(MsBackendMzR(), files = sample_mzXML_file)
>
>
> mgf_file <- file.path(system.file(package = "MsBackendRawFileReader"),
+ 'extdata', '3159619b11ed_4590_9594.mgf')
>
>
> rv <- lapply(1:2, function(x){
+ file.copy(from = sample_raw_file, to = tempfile(fileext='.raw'))})
>
>
> register(SnowParam(workers = 1, type = "SOCK") , default = TRUE);
> sample_raw_2 <- backendInitialize(MsBackendRawFileReader(),
+ files = file.path(tempdir(),
+ list.files(path = tempdir(), pattern = 'raw$')))
>
>
> test_check("MsBackendRawFileReader")
[ FAIL 0 | WARN 1 | SKIP 2 | PASS 20 ]
══ Skipped tests (2) ═══════════════════════════════════════════════════════════
• isFALSE(file.exists(sample_mzXML_file)) is TRUE (1):
'test_MsBackendMzR_MsBackendRawFileReader.R:1:1'
• isFALSE(require(MsBackendRawMgf)) is TRUE (1): 'test_top_n_mgf.R:1:1'
[ FAIL 0 | WARN 1 | SKIP 2 | PASS 20 ]
>
>
> be <- Spectra::backendInitialize(MsBackendRawFileReader::MsBackendRawFileReader(),
+ files = c(sample_raw_file))
>
> ## Run the MsBackend spectra variable test suite
> test_suite <- system.file("test_backends", "test_MsBackend",
+ package = "Spectra")
>
> #res <- test_file(paste0(test_suite, "/test_spectra_variables.R"),
> # reporter = check_reporter(), stop_on_failure = TRUE)
>
>
> ## Run the whole suite.
> res <- test_dir(test_suite, stop_on_failure = TRUE)
✔ | F W S OK | Context
⠏ | 0 | spectra_subsetting
⠋ | 1 | spectra_subsetting
⠸ | 14 | spectra_subsetting
⠇ | 29 | spectra_subsetting
⠹ | 43 | spectra_subsetting
⠴ | 56 | spectra_subsetting
⠏ | 70 | spectra_subsetting
⠼ | 85 | spectra_subsetting
⠏ | 100 | spectra_subsetting
⠼ | 115 | spectra_subsetting
⠏ | 130 | spectra_subsetting
⠙ | 142 | spectra_subsetting
⠦ | 157 | spectra_subsetting
⠙ | 172 | spectra_subsetting
⠴ | 186 | spectra_subsetting
⠙ | 202 | spectra_subsetting
⠦ | 217 | spectra_subsetting
⠏ | 230 | spectra_subsetting
⠼ | 245 | spectra_subsetting
⠇ | 259 | spectra_subsetting
⠙ | 272 | spectra_subsetting
⠇ | 289 | spectra_subsetting
⠸ | 304 | spectra_subsetting
⠦ | 317 | spectra_subsetting
⠙ | 332 | spectra_subsetting
⠴ | 346 | spectra_subsetting
⠋ | 361 | spectra_subsetting
⠴ | 376 | spectra_subsetting
⠙ | 382 | spectra_subsetting
⠦ | 397 | spectra_subsetting
⠹ | 413 | spectra_subsetting
⠧ | 428 | spectra_subsetting
⠙ | 442 | spectra_subsetting
⠦ | 457 | spectra_subsetting
⠙ | 472 | spectra_subsetting
⠼ | 485 | spectra_subsetting
⠇ | 499 | spectra_subsetting
⠸ | 514 | spectra_subsetting
⠇ | 529 | spectra_subsetting
⠸ | 544 | spectra_subsetting
⠇ | 559 | spectra_subsetting
⠋ | 571 | spectra_subsetting
⠹ | 583 | spectra_subsetting
⠧ | 598 | spectra_subsetting
⠹ | 613 | spectra_subsetting
⠴ | 626 | spectra_subsetting
⠋ | 641 | spectra_subsetting
⠴ | 656 | spectra_subsetting
⠧ | 668 | spectra_subsetting
⠙ | 682 | spectra_subsetting
⠧ | 698 | spectra_subsetting
⠙ | 712 | spectra_subsetting
⠦ | 727 | spectra_subsetting
⠙ | 742 | spectra_subsetting
⠦ | 757 | spectra_subsetting
⠇ | 769 | spectra_subsetting
⠼ | 785 | spectra_subsetting
⠏ | 800 | spectra_subsetting
⠸ | 814 | spectra_subsetting
⠏ | 830 | spectra_subsetting
⠼ | 845 | spectra_subsetting
⠇ | 859 | spectra_subsetting
⠼ | 875 | spectra_subsetting
⠋ | 891 | spectra_subsetting
⠙ | 902 | spectra_subsetting
⠴ | 916 | spectra_subsetting
⠙ | 932 | spectra_subsetting
⠴ | 946 | spectra_subsetting
⠋ | 961 | spectra_subsetting
⠧ | 978 | spectra_subsetting
⠋ | 991 | spectra_subsetting
⠴ | 1006 | spectra_subsetting
⠙ | 1022 | spectra_subsetting
⠴ | 1036 | spectra_subsetting
⠋ | 1051 | spectra_subsetting
⠦ | 1067 | spectra_subsetting
⠙ | 1082 | spectra_subsetting
⠴ | 1096 | spectra_subsetting
⠙ | 1112 | spectra_subsetting
⠴ | 1126 | spectra_subsetting
⠧ | 1138 | spectra_subsetting
⠹ | 1153 | spectra_subsetting
⠏ | 1170 | spectra_subsetting
⠹ | 1183 | spectra_subsetting
⠇ | 1199 | spectra_subsetting
⠴ | 1216 | spectra_subsetting
⠇ | 1229 | spectra_subsetting
⠹ | 1243 | spectra_subsetting
⠇ | 1259 | spectra_subsetting
⠹ | 1273 | spectra_subsetting
⠧ | 1288 | spectra_subsetting
⠸ | 1304 | spectra_subsetting
⠧ | 1318 | spectra_subsetting
⠹ | 1333 | spectra_subsetting
⠧ | 1348 | spectra_subsetting
⠸ | 1354 | spectra_subsetting
⠙ | 1372 | spectra_subsetting
⠇ | 1389 | spectra_subsetting
⠼ | 1405 | spectra_subsetting
⠹ | 1423 | spectra_subsetting
⠏ | 1440 | spectra_subsetting
⠸ | 1454 | spectra_subsetting
⠋ | 1471 | spectra_subsetting
⠇ | 1489 | spectra_subsetting
⠼ | 1505 | spectra_subsetting
⠙ | 1522 | spectra_subsetting
⠦ | 1537 | spectra_subsetting
⠹ | 1553 | spectra_subsetting
⠏ | 1570 | spectra_subsetting
⠧ | 1588 | spectra_subsetting
⠹ | 1603 | spectra_subsetting
⠧ | 1618 | spectra_subsetting
⠹ | 1633 | spectra_subsetting
⠧ | 1648 | spectra_subsetting
⠹ | 1663 | spectra_subsetting
⠋ | 1681 | spectra_subsetting
⠇ | 1699 | spectra_subsetting
⠦ | 1717 | spectra_subsetting
⠸ | 1724 | spectra_subsetting
⠴ | 1726 | spectra_subsetting
⠧ | 1728 | spectra_subsetting
⠏ | 1730 | spectra_subsetting
⠙ | 1732 | spectra_subsetting
⠸ | 1734 | spectra_subsetting
⠴ | 1736 | spectra_subsetting
⠧ | 1738 | spectra_subsetting
⠏ | 1740 | spectra_subsetting
⠙ | 1742 | spectra_subsetting
⠸ | 1744 | spectra_subsetting
⠴ | 1746 | spectra_subsetting
⠧ | 1748 | spectra_subsetting
⠏ | 1750 | spectra_subsetting
⠙ | 1752 | spectra_subsetting
⠸ | 1754 | spectra_subsetting
⠴ | 1756 | spectra_subsetting
⠧ | 1758 | spectra_subsetting
⠏ | 1760 | spectra_subsetting
⠙ | 1762 | spectra_subsetting
⠸ | 1764 | spectra_subsetting
⠴ | 1766 | spectra_subsetting
⠧ | 1768 | spectra_subsetting
⠏ | 1770 | spectra_subsetting
⠙ | 1772 | spectra_subsetting
⠸ | 1774 | spectra_subsetting
⠴ | 1776 | spectra_subsetting
⠧ | 1778 | spectra_subsetting
⠏ | 1780 | spectra_subsetting
⠙ | 1782 | spectra_subsetting
⠸ | 1784 | spectra_subsetting
⠴ | 1786 | spectra_subsetting
⠧ | 1788 | spectra_subsetting
⠏ | 1790 | spectra_subsetting
⠙ | 1792 | spectra_subsetting
⠸ | 1794 | spectra_subsetting
⠴ | 1796 | spectra_subsetting
⠧ | 1798 | spectra_subsetting
⠏ | 1800 | spectra_subsetting
⠙ | 1802 | spectra_subsetting
⠸ | 1804 | spectra_subsetting
⠴ | 1806 | spectra_subsetting
⠧ | 1808 | spectra_subsetting
⠏ | 1810 | spectra_subsetting
⠙ | 1812 | spectra_subsetting
⠸ | 1814 | spectra_subsetting
⠴ | 1816 | spectra_subsetting
⠧ | 1818 | spectra_subsetting
⠏ | 1820 | spectra_subsetting
⠙ | 1822 | spectra_subsetting
⠸ | 1824 | spectra_subsetting
⠴ | 1826 | spectra_subsetting
⠧ | 1828 | spectra_subsetting
⠏ | 1830 | spectra_subsetting
⠙ | 1832 | spectra_subsetting
⠸ | 1834 | spectra_subsetting
⠴ | 1836 | spectra_subsetting
⠧ | 1838 | spectra_subsetting
⠏ | 1840 | spectra_subsetting
⠙ | 1842 | spectra_subsetting
⠸ | 1844 | spectra_subsetting
⠴ | 1846 | spectra_subsetting
⠧ | 1848 | spectra_subsetting
⠏ | 1850 | spectra_subsetting
⠙ | 1852 | spectra_subsetting
⠸ | 1854 | spectra_subsetting
⠴ | 1856 | spectra_subsetting
⠧ | 1858 | spectra_subsetting
⠏ | 1860 | spectra_subsetting
⠙ | 1862 | spectra_subsetting
⠸ | 1864 | spectra_subsetting
⠴ | 1866 | spectra_subsetting
⠧ | 1868 | spectra_subsetting
⠏ | 1870 | spectra_subsetting
⠙ | 1872 | spectra_subsetting
⠸ | 1874 | spectra_subsetting
⠴ | 1876 | spectra_subsetting
⠧ | 1878 | spectra_subsetting
⠏ | 1880 | spectra_subsetting
⠙ | 1882 | spectra_subsetting
⠸ | 1884 | spectra_subsetting
⠴ | 1886 | spectra_subsetting
⠧ | 1888 | spectra_subsetting
⠏ | 1890 | spectra_subsetting
⠙ | 1892 | spectra_subsetting
⠸ | 1894 | spectra_subsetting
⠴ | 1896 | spectra_subsetting
⠧ | 1898 | spectra_subsetting
⠏ | 1900 | spectra_subsetting
⠙ | 1902 | spectra_subsetting
⠸ | 1904 | spectra_subsetting
⠴ | 1906 | spectra_subsetting
⠧ | 1908 | spectra_subsetting
⠏ | 1910 | spectra_subsetting
⠙ | 1912 | spectra_subsetting
⠸ | 1914 | spectra_subsetting
⠴ | 1916 | spectra_subsetting
⠧ | 1918 | spectra_subsetting
⠏ | 1920 | spectra_subsetting
⠙ | 1922 | spectra_subsetting
⠸ | 1924 | spectra_subsetting
⠴ | 1926 | spectra_subsetting
⠧ | 1928 | spectra_subsetting
⠏ | 1930 | spectra_subsetting
⠙ | 1932 | spectra_subsetting
⠸ | 1934 | spectra_subsetting
⠴ | 1936 | spectra_subsetting
⠧ | 1938 | spectra_subsetting
⠏ | 1940 | spectra_subsetting
⠙ | 1942 | spectra_subsetting
⠸ | 1944 | spectra_subsetting
⠴ | 1946 | spectra_subsetting
⠧ | 1948 | spectra_subsetting
⠏ | 1950 | spectra_subsetting
⠙ | 1952 | spectra_subsetting
⠸ | 1954 | spectra_subsetting
⠴ | 1956 | spectra_subsetting
⠧ | 1958 | spectra_subsetting
⠏ | 1960 | spectra_subsetting
⠙ | 1962 | spectra_subsetting
⠸ | 1964 | spectra_subsetting
⠴ | 1966 | spectra_subsetting
⠧ | 1968 | spectra_subsetting
⠏ | 1970 | spectra_subsetting
⠙ | 1972 | spectra_subsetting
⠸ | 1974 | spectra_subsetting
⠴ | 1976 | spectra_subsetting
⠧ | 1978 | spectra_subsetting
⠏ | 1980 | spectra_subsetting
⠙ | 1982 | spectra_subsetting
⠸ | 1984 | spectra_subsetting
⠴ | 1986 | spectra_subsetting
⠧ | 1988 | spectra_subsetting
⠏ | 1990 | spectra_subsetting
⠙ | 1992 | spectra_subsetting
⠸ | 1994 | spectra_subsetting
⠴ | 1996 | spectra_subsetting
⠧ | 1998 | spectra_subsetting
⠏ | 2000 | spectra_subsetting
⠙ | 2002 | spectra_subsetting
⠸ | 2004 | spectra_subsetting
⠴ | 2006 | spectra_subsetting
⠧ | 2008 | spectra_subsetting
⠏ | 2010 | spectra_subsetting
⠙ | 2012 | spectra_subsetting
⠸ | 2014 | spectra_subsetting
⠴ | 2016 | spectra_subsetting
⠧ | 2018 | spectra_subsetting
⠏ | 2020 | spectra_subsetting
⠙ | 2022 | spectra_subsetting
⠸ | 2024 | spectra_subsetting
⠴ | 2026 | spectra_subsetting
⠧ | 2028 | spectra_subsetting
⠏ | 2030 | spectra_subsetting
⠙ | 2032 | spectra_subsetting
⠸ | 2034 | spectra_subsetting
⠴ | 2036 | spectra_subsetting
⠧ | 2038 | spectra_subsetting
⠏ | 2040 | spectra_subsetting
⠙ | 2042 | spectra_subsetting
⠸ | 2044 | spectra_subsetting
⠴ | 2046 | spectra_subsetting
⠧ | 2048 | spectra_subsetting
⠏ | 2050 | spectra_subsetting
⠙ | 2052 | spectra_subsetting
⠸ | 2054 | spectra_subsetting
⠴ | 2056 | spectra_subsetting
⠧ | 2058 | spectra_subsetting
⠏ | 2060 | spectra_subsetting
⠙ | 2062 | spectra_subsetting
⠸ | 2064 | spectra_subsetting
⠴ | 2066 | spectra_subsetting
⠧ | 2068 | spectra_subsetting
⠏ | 2070 | spectra_subsetting
⠙ | 2072 | spectra_subsetting
⠸ | 2074 | spectra_subsetting
⠴ | 2076 | spectra_subsetting
⠧ | 2078 | spectra_subsetting
⠏ | 2080 | spectra_subsetting
⠙ | 2082 | spectra_subsetting
⠸ | 2084 | spectra_subsetting
⠴ | 2086 | spectra_subsetting
⠧ | 2088 | spectra_subsetting
⠏ | 2090 | spectra_subsetting
⠙ | 2092 | spectra_subsetting
⠸ | 2094 | spectra_subsetting
⠴ | 2096 | spectra_subsetting
⠧ | 2098 | spectra_subsetting
⠏ | 2100 | spectra_subsetting
⠙ | 2102 | spectra_subsetting
⠸ | 2104 | spectra_subsetting
⠴ | 2106 | spectra_subsetting
⠧ | 2108 | spectra_subsetting
⠏ | 2110 | spectra_subsetting
⠙ | 2112 | spectra_subsetting
⠸ | 2114 | spectra_subsetting
⠴ | 2116 | spectra_subsetting
⠧ | 2118 | spectra_subsetting
⠏ | 2120 | spectra_subsetting
⠙ | 2122 | spectra_subsetting
⠸ | 2124 | spectra_subsetting
⠴ | 2126 | spectra_subsetting
⠧ | 2128 | spectra_subsetting
⠏ | 2130 | spectra_subsetting
⠙ | 2132 | spectra_subsetting
⠸ | 2134 | spectra_subsetting
⠴ | 2136 | spectra_subsetting
⠧ | 2138 | spectra_subsetting
⠏ | 2140 | spectra_subsetting
⠙ | 2142 | spectra_subsetting
⠸ | 2144 | spectra_subsetting
⠴ | 2146 | spectra_subsetting
⠧ | 2148 | spectra_subsetting
⠏ | 2150 | spectra_subsetting
⠙ | 2152 | spectra_subsetting
⠸ | 2154 | spectra_subsetting
⠴ | 2156 | spectra_subsetting
⠧ | 2158 | spectra_subsetting
⠏ | 2160 | spectra_subsetting
⠙ | 2162 | spectra_subsetting
⠸ | 2164 | spectra_subsetting
⠴ | 2166 | spectra_subsetting
⠧ | 2168 | spectra_subsetting
⠏ | 2170 | spectra_subsetting
⠙ | 2172 | spectra_subsetting
⠸ | 2174 | spectra_subsetting
⠴ | 2176 | spectra_subsetting
⠧ | 2178 | spectra_subsetting
⠏ | 2180 | spectra_subsetting
⠙ | 2182 | spectra_subsetting
⠸ | 2184 | spectra_subsetting
⠴ | 2186 | spectra_subsetting
⠧ | 2188 | spectra_subsetting
⠏ | 2190 | spectra_subsetting
⠙ | 2192 | spectra_subsetting
⠸ | 2194 | spectra_subsetting
⠴ | 2196 | spectra_subsetting
⠧ | 2198 | spectra_subsetting
⠏ | 2200 | spectra_subsetting
⠙ | 2202 | spectra_subsetting
⠸ | 2204 | spectra_subsetting
⠴ | 2206 | spectra_subsetting
⠧ | 2208 | spectra_subsetting
⠏ | 2210 | spectra_subsetting
⠙ | 2212 | spectra_subsetting
⠸ | 2214 | spectra_subsetting
⠴ | 2216 | spectra_subsetting
⠧ | 2218 | spectra_subsetting
⠏ | 2220 | spectra_subsetting
⠙ | 2222 | spectra_subsetting
⠸ | 2224 | spectra_subsetting
⠴ | 2226 | spectra_subsetting
⠧ | 2228 | spectra_subsetting
⠏ | 2230 | spectra_subsetting
⠙ | 2232 | spectra_subsetting
⠸ | 2234 | spectra_subsetting
⠴ | 2236 | spectra_subsetting
⠧ | 2238 | spectra_subsetting
⠏ | 2240 | spectra_subsetting
⠙ | 2242 | spectra_subsetting
⠸ | 2244 | spectra_subsetting
⠴ | 2246 | spectra_subsetting
⠧ | 2248 | spectra_subsetting
⠏ | 2250 | spectra_subsetting
⠙ | 2252 | spectra_subsetting
⠸ | 2254 | spectra_subsetting
⠴ | 2256 | spectra_subsetting
⠧ | 2258 | spectra_subsetting
⠏ | 2260 | spectra_subsetting
⠙ | 2262 | spectra_subsetting
⠸ | 2264 | spectra_subsetting
⠴ | 2266 | spectra_subsetting
⠧ | 2268 | spectra_subsetting
⠏ | 2270 | spectra_subsetting
⠙ | 2272 | spectra_subsetting
⠸ | 2274 | spectra_subsetting
⠴ | 2276 | spectra_subsetting
⠧ | 2278 | spectra_subsetting
⠏ | 2280 | spectra_subsetting
⠙ | 2282 | spectra_subsetting
⠸ | 2284 | spectra_subsetting
⠴ | 2286 | spectra_subsetting
⠧ | 2288 | spectra_subsetting
⠏ | 2290 | spectra_subsetting
⠙ | 2292 | spectra_subsetting
⠸ | 2294 | spectra_subsetting
⠴ | 2296 | spectra_subsetting
⠏ | 2300 | spectra_subsetting
⠴ | 2306 | spectra_subsetting
⠹ | 2313 | spectra_subsetting
✔ | 2313 | spectra_subsetting [46.2s]
⠏ | 0 | spectra_variables
⠙ | 12 | spectra_variables
⠸ | 14 | spectra_variables
⠴ | 16 | spectra_variables
⠇ | 39 | spectra_variables
⠹ | 43 | spectra_variables
⠇ | 1 58 | spectra_variables
✔ | 1 62 | spectra_variables [8.2s]
══ Results ═════════════════════════════════════════════════════════════════════
Duration: 54.4 s
── Skipped tests (1) ───────────────────────────────────────────────────────────
• empty test (1): 'test_spectra_variables.R:262:1'
[ FAIL 0 | WARN 0 | SKIP 1 | PASS 2375 ]
>
> proc.time()
user system elapsed
82.285 4.745 84.675
MsBackendRawFileReader.Rcheck/MsBackendRawFileReader-Ex.timings
| name | user | system | elapsed | |
| MsBackendRawFileReader-class | 3.551 | 0.548 | 3.827 | |
| MsBackendRawFileReader | 5.262 | 1.387 | 5.838 | |
| hidden_aliases | 2.391 | 0.514 | 2.587 | |
| ioBenchmark | 40.777 | 4.318 | 12.210 | |