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INSTALL report for biomvRCNS on tokay1

This page was generated on 2020-08-07 12:01:50 -0400 (Fri, 07 Aug 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE biomvRCNS PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 171/1882HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
biomvRCNS 1.29.0
Yang Du
Snapshot Date: 2020-08-06 14:50:46 -0400 (Thu, 06 Aug 2020)
URL: https://git.bioconductor.org/packages/biomvRCNS
Branch: master
Last Commit: a8eb7d4
Last Changed Date: 2020-04-27 14:33:11 -0400 (Mon, 27 Apr 2020)
malbec1 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida1 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: biomvRCNS
Version: 1.29.0
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.12/bioc/src/contrib/biomvRCNS_1.29.0.tar.gz && rm -rf biomvRCNS.buildbin-libdir && mkdir biomvRCNS.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=biomvRCNS.buildbin-libdir biomvRCNS_1.29.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL biomvRCNS_1.29.0.zip && rm biomvRCNS_1.29.0.tar.gz biomvRCNS_1.29.0.zip
StartedAt: 2020-08-06 18:54:40 -0400 (Thu, 06 Aug 2020)
EndedAt: 2020-08-06 18:56:28 -0400 (Thu, 06 Aug 2020)
EllapsedTime: 107.9 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.12/bioc/src/contrib/biomvRCNS_1.29.0.tar.gz && rm -rf biomvRCNS.buildbin-libdir && mkdir biomvRCNS.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=biomvRCNS.buildbin-libdir biomvRCNS_1.29.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL biomvRCNS_1.29.0.zip && rm biomvRCNS_1.29.0.tar.gz biomvRCNS_1.29.0.zip
###
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install for i386

* installing *source* package 'biomvRCNS' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c biomvRCNS.c -o biomvRCNS.o
C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o biomvRCNS.dll tmp.def biomvRCNS.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.12-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.12-bioc/meat/biomvRCNS.buildbin-libdir/00LOCK-biomvRCNS/00new/biomvRCNS/libs/i386
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'biomvRCNS'
    finding HTML links ... done
    biomvRCNS-class                         html  
    biomvRGviz                              html  
    biomvRhsmm                              html  
    biomvRmgmr                              html  
    biomvRseg                               html  
    coriell                                 html  
    encodeTP53                              html  
    hsmmRun                                 html  
    maxGapminRun                            html  
    regionSegAlphaNB                        html  
    regionSegCost                           html  
    simSegData                              html  
    sojournAnno                             html  
    splitFarNeighbour                       html  
    variosm                                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'biomvRCNS' ...
** libs
"C:/rtools40/mingw64/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c biomvRCNS.c -o biomvRCNS.o
C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o biomvRCNS.dll tmp.def biomvRCNS.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.12-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.12-bioc/meat/biomvRCNS.buildbin-libdir/biomvRCNS/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'biomvRCNS' as biomvRCNS_1.29.0.zip
* DONE (biomvRCNS)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'biomvRCNS' successfully unpacked and MD5 sums checked