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INSTALL report for ChIPpeakAnno on tokay1

This page was generated on 2020-08-07 11:58:50 -0400 (Fri, 07 Aug 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE ChIPpeakAnno PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 274/1882HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ChIPpeakAnno 3.23.4
Lihua Julie Zhu
Snapshot Date: 2020-08-06 14:50:46 -0400 (Thu, 06 Aug 2020)
URL: https://git.bioconductor.org/packages/ChIPpeakAnno
Branch: master
Last Commit: 538e556
Last Changed Date: 2020-08-04 12:43:36 -0400 (Tue, 04 Aug 2020)
malbec1 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida1 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: ChIPpeakAnno
Version: 3.23.4
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.12/bioc/src/contrib/ChIPpeakAnno_3.23.4.tar.gz && rm -rf ChIPpeakAnno.buildbin-libdir && mkdir ChIPpeakAnno.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ChIPpeakAnno.buildbin-libdir ChIPpeakAnno_3.23.4.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL ChIPpeakAnno_3.23.4.zip && rm ChIPpeakAnno_3.23.4.tar.gz ChIPpeakAnno_3.23.4.zip
StartedAt: 2020-08-06 18:40:49 -0400 (Thu, 06 Aug 2020)
EndedAt: 2020-08-06 18:43:00 -0400 (Thu, 06 Aug 2020)
EllapsedTime: 131.7 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.12/bioc/src/contrib/ChIPpeakAnno_3.23.4.tar.gz && rm -rf ChIPpeakAnno.buildbin-libdir && mkdir ChIPpeakAnno.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ChIPpeakAnno.buildbin-libdir ChIPpeakAnno_3.23.4.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL ChIPpeakAnno_3.23.4.zip && rm ChIPpeakAnno_3.23.4.tar.gz ChIPpeakAnno_3.23.4.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
 50 15.6M   50 8048k    0     0  53.7M      0 --:--:-- --:--:-- --:--:-- 54.5M
100 15.6M  100 15.6M    0     0  72.7M      0 --:--:-- --:--:-- --:--:-- 73.6M

install for i386

* installing *source* package 'ChIPpeakAnno' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'ChIPpeakAnno'
    finding HTML links ... done
    ChIPpeakAnno-deprecated                 html  
    ChIPpeakAnno-package                    html  
    EnsDb2GR                                html  
    ExonPlusUtr.human.GRCh37                html  
    HOT.spots                               html  
    IDRfilter                               html  
    Peaks.Ste12.Replicate1                  html  
    Peaks.Ste12.Replicate2                  html  
    Peaks.Ste12.Replicate3                  html  
    TSS.human.GRCh37                        html  
    TSS.human.GRCh38                        html  
    TSS.human.NCBI36                        html  
    TSS.mouse.GRCm38                        html  
    TSS.mouse.NCBIM37                       html  
    TSS.rat.RGSC3.4                         html  
    TSS.rat.Rnor_5.0                        html  
    TSS.zebrafish.Zv8                       html  
    TSS.zebrafish.Zv9                       html  
    TxDb2GR                                 html  
    addAncestors                            html  
    addGeneIDs                              html  
    addMetadata                             html  
    annoGR                                  html  
    annoPeaks                               html  
    annotatePeakInBatch                     html  
    annotatedPeak                           html  
    assignChromosomeRegion                  html  
    bdp                                     html  
    binOverFeature                          html  
    binOverGene                             html  
    binOverRegions                          html  
    bindist                                 html  
    cntOverlaps                             html  
    condenseMatrixByColnames                html  
    convert2EntrezID                        html  
    countPatternInSeqs                      html  
    cumulativePercentage                    html  
    egOrgMap                                html  
    enrichedGO                              html  
    estFragmentLength                       html  
    estLibSize                              html  
    featureAlignedDistribution              html  
    featureAlignedExtendSignal              html  
    featureAlignedHeatmap                   html  
    featureAlignedSignal                    html  
    findEnhancers                           html  
    findMotifsInPromoterSeqs                html  
    findOverlappingPeaks                    html  
    findOverlapsOfPeaks                     html  
    getAllPeakSequence                      html  
    getAnnotation                           html  
    getEnrichedGO                           html  
    getEnrichedPATH                         html  
    getGO                                   html  
    getGeneSeq                              html  
    getUniqueGOidCount                      html  
    getVennCounts                           html  
    hyperGtest                              html  
    makeVennDiagram                         html  
    mergePlusMinusPeaks                     html  
    myPeakList                              html  
    oligoFrequency                          html  
    oligoSummary                            html  
    peakPermTest                            html  
    peaksNearBDP                            html  
    permPool                                html  
    pie1                                    html  
    plotBinOverRegions                      html  
    preparePool                             html  
    reCenterPeaks                           html  
    summarizeOverlapsByBins                 html  
    summarizePatternInPeaks                 html  
    tileCount                               html  
    tileGRanges                             html  
    toGRanges                               html  
    translatePattern                        html  
    wgEncodeTfbsV3                          html  
    write2FASTA                             html  
    xget                                    html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'ChIPpeakAnno' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ChIPpeakAnno' as ChIPpeakAnno_3.23.4.zip
* DONE (ChIPpeakAnno)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'ChIPpeakAnno' successfully unpacked and MD5 sums checked