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INSTALL report for ADaCGH2 on merida1

This page was generated on 2020-08-07 12:25:13 -0400 (Fri, 07 Aug 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE ADaCGH2 PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 15/1882HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ADaCGH2 2.29.0
Ramon Diaz-Uriarte
Snapshot Date: 2020-08-06 14:50:46 -0400 (Thu, 06 Aug 2020)
URL: https://git.bioconductor.org/packages/ADaCGH2
Branch: master
Last Commit: 31c21bb
Last Changed Date: 2020-04-27 14:23:32 -0400 (Mon, 27 Apr 2020)
malbec1 Linux (Ubuntu 18.04.4 LTS) / x86_64  ERROR  ERROR  skipped 
tokay1 Windows Server 2012 R2 Standard / x64  ERROR  ERROR  skipped  skipped 
merida1 macOS 10.14.6 Mojave / x86_64 [ ERROR ] ERROR  skipped  skipped 

Summary

Package: ADaCGH2
Version: 2.29.0
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL ADaCGH2
StartedAt: 2020-08-06 16:40:18 -0400 (Thu, 06 Aug 2020)
EndedAt: 2020-08-06 16:40:56 -0400 (Thu, 06 Aug 2020)
EllapsedTime: 37.8 seconds
RetCode: 1
Status:  ERROR 

Command output

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### Running command:
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###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL ADaCGH2
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* installing to library ‘/Library/Frameworks/R.framework/Versions/4.0/Resources/library’
* installing *source* package ‘ADaCGH2’ ...
** using staged installation
** libs
clang -mmacosx-version-min=10.13 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -I/usr/local/include   -fPIC  -Wall -g -O2  -c init.c -o init.o
clang -mmacosx-version-min=10.13 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -I/usr/local/include   -fPIC  -Wall -g -O2  -c r_haarseg.c -o r_haarseg.o
r_haarseg.c:65:12: warning: unused variable 'totalNorm' [-Wunused-variable]
    double totalNorm;
           ^
r_haarseg.c:152:8: warning: '/*' within block comment [-Wcomment]
                                         }/* for j */
                                          ^
r_haarseg.c:176:8: warning: '/*' within block comment [-Wcomment]
                                         }/* for j */
                                          ^
r_haarseg.c:128:9: warning: unused variable 'j' [-Wunused-variable]
         int k,j;
               ^
4 warnings generated.
clang -mmacosx-version-min=10.13 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o ADaCGH2.so init.o r_haarseg.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/4.0/Resources/library/00LOCK-ADaCGH2/00new/ADaCGH2/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Error: object ‘is.factor.ff’ is not exported by 'namespace:ff'
Execution halted
ERROR: lazy loading failed for package ‘ADaCGH2’
* removing ‘/Library/Frameworks/R.framework/Versions/4.0/Resources/library/ADaCGH2’
* restoring previous ‘/Library/Frameworks/R.framework/Versions/4.0/Resources/library/ADaCGH2’