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This page was generated on 2024-05-22 11:36:38 -0400 (Wed, 22 May 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.3 LTS)x86_644.4.0 (2024-04-24) -- "Puppy Cup" 4751
palomino3Windows Server 2022 Datacenterx644.4.0 (2024-04-24 ucrt) -- "Puppy Cup" 4485
lconwaymacOS 12.7.1 Montereyx86_644.4.0 (2024-04-24) -- "Puppy Cup" 3444
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 947/2300HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
HDF5Array 1.32.0  (landing page)
Hervé Pagès
Snapshot Date: 2024-05-21 14:00:15 -0400 (Tue, 21 May 2024)
git_url: https://git.bioconductor.org/packages/HDF5Array
git_branch: RELEASE_3_19
git_last_commit: eea6c75
git_last_commit_date: 2024-04-30 14:09:32 -0400 (Tue, 30 Apr 2024)
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  ERROR    OK    ERROR    ERROR  
kjohnson3macOS 13.6.5 Ventura / arm64see weekly results here

CHECK results for HDF5Array on lconway


To the developers/maintainers of the HDF5Array package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/HDF5Array.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: HDF5Array
Version: 1.32.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:HDF5Array.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings HDF5Array_1.32.0.tar.gz
StartedAt: 2024-05-21 17:11:33 -0400 (Tue, 21 May 2024)
EndedAt: 2024-05-21 17:11:40 -0400 (Tue, 21 May 2024)
EllapsedTime: 7.0 seconds
RetCode: 1
Status:   ERROR  
CheckDir: HDF5Array.Rcheck
Warnings: NA

Command output

##############################################################################
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###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:HDF5Array.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings HDF5Array_1.32.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/Users/biocbuild/bbs-3.19-bioc/meat/HDF5Array.Rcheck’
* using R version 4.4.0 (2024-04-24)
* using platform: x86_64-apple-darwin20
* R was compiled by
    Apple clang version 14.0.0 (clang-1400.0.29.202)
    GNU Fortran (GCC) 12.2.0
* running under: macOS Monterey 12.7.1
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘HDF5Array/DESCRIPTION’ ... OK
* this is package ‘HDF5Array’ version ‘1.32.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘DelayedArray’

Packages suggested but not available:
  'SummarizedExperiment', 'zellkonverter', 'GenomicFeatures',
  'SingleCellExperiment', 'DelayedMatrixStats'

The suggested packages are required for a complete check.
Checking can be attempted without them by setting the environment
variable _R_CHECK_FORCE_SUGGESTS_ to a false value.

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE

Status: 1 ERROR
See
  ‘/Users/biocbuild/bbs-3.19-bioc/meat/HDF5Array.Rcheck/00check.log’
for details.


Installation output


Tests output


Example timings