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This page was generated on 2024-05-01 11:36:46 -0400 (Wed, 01 May 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.3 LTS)x86_644.4.0 beta (2024-04-15 r86425) -- "Puppy Cup" 4753
lconwaymacOS 12.7.1 Montereyx86_644.4.0 beta (2024-04-14 r86421) -- "Puppy Cup" 4518
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 2185/2300HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
tpSVG 1.0.0  (landing page)
Boyi Guo
Snapshot Date: 2024-04-30 20:18:44 -0400 (Tue, 30 Apr 2024)
git_url: https://git.bioconductor.org/packages/tpSVG
git_branch: RELEASE_3_19
git_last_commit: 59acc73
git_last_commit_date: 2024-04-30 11:54:40 -0400 (Tue, 30 Apr 2024)
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    ERROR  skipped
lconwaymacOS 12.7.1 Monterey / x86_64  OK    ERROR  skippedskipped
kjohnson3macOS 13.6.5 Ventura / arm64see weekly results here

BUILD results for tpSVG on lconway


To the developers/maintainers of the tpSVG package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/tpSVG.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: tpSVG
Version: 1.0.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data tpSVG
StartedAt: 2024-05-01 01:22:44 -0400 (Wed, 01 May 2024)
EndedAt: 2024-05-01 01:23:29 -0400 (Wed, 01 May 2024)
EllapsedTime: 44.2 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data tpSVG
###
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* checking for file ‘tpSVG/DESCRIPTION’ ... OK
* preparing ‘tpSVG’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘intro_to_tpSVG.Rmd’ using rmarkdown

Quitting from lines  at lines 75-91 [data_preprocess] (intro_to_tpSVG.Rmd)
Error: processing vignette 'intro_to_tpSVG.Rmd' failed with diagnostics:
"Visium_humanDLPFC" matches more than 1 ExperimentHub resource
--- failed re-building ‘intro_to_tpSVG.Rmd’

SUMMARY: processing the following file failed:
  ‘intro_to_tpSVG.Rmd’

Error: Vignette re-building failed.
Execution halted