Back to Multiple platform build/check report for BioC 3.19:   simplified   long
ABCDEFGHIJKLMNOPQR[S]TUVWXYZ

This page was generated on 2024-04-29 11:41:23 -0400 (Mon, 29 Apr 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.3 LTS)x86_644.4.0 beta (2024-04-15 r86425) -- "Puppy Cup" 4752
palomino3Windows Server 2022 Datacenterx644.4.0 beta (2024-04-15 r86425 ucrt) -- "Puppy Cup" 4486
lconwaymacOS 12.7.1 Montereyx86_644.4.0 beta (2024-04-14 r86421) -- "Puppy Cup" 4518
kunpeng2Linux (openEuler 22.03 LTS-SP1)aarch644.4.0 beta (2024-04-15 r86425) -- "Puppy Cup" 4475
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1938/2300HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
seq2pathway 1.35.0  (landing page)
Arjun Kinstlick
Snapshot Date: 2024-04-28 14:00:16 -0400 (Sun, 28 Apr 2024)
git_url: https://git.bioconductor.org/packages/seq2pathway
git_branch: devel
git_last_commit: 72781a1
git_last_commit_date: 2023-10-24 10:41:14 -0400 (Tue, 24 Oct 2023)
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
kunpeng2Linux (openEuler 22.03 LTS-SP1) / aarch64  OK    OK    WARNINGS  
kjohnson3macOS 13.6.5 Ventura / arm64see weekly results here

BUILD results for seq2pathway on kunpeng2


To the developers/maintainers of the seq2pathway package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/seq2pathway.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.
- See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host.

raw results


Summary

Package: seq2pathway
Version: 1.35.0
Command: /home/biocbuild/R/R-beta-2024-04-15_r86425/bin/R CMD build --keep-empty-dirs --no-resave-data seq2pathway
StartedAt: 2024-04-29 02:14:24 -0000 (Mon, 29 Apr 2024)
EndedAt: 2024-04-29 02:15:49 -0000 (Mon, 29 Apr 2024)
EllapsedTime: 85.1 seconds
RetCode: 0
Status:   OK  
PackageFile: seq2pathway_1.35.0.tar.gz
PackageFileSize: 1.409 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/R/R-beta-2024-04-15_r86425/bin/R CMD build --keep-empty-dirs --no-resave-data seq2pathway
###
##############################################################################
##############################################################################


* checking for file ‘seq2pathway/DESCRIPTION’ ... OK
* preparing ‘seq2pathway’:
* checking DESCRIPTION meta-information ... OK
* checking whether ‘INDEX’ is up-to-date ... OK
* installing the package to build vignettes
* creating vignettes ... OK
* excluding invalid files
Subdirectory 'R' contains invalid file names:
  ‘seq2pathway’ ‘seq2pathway.rdb’ ‘seq2pathway.rdx’
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
WARNING: Removing directory ‘seq2pathway/Meta’ which should only occur
  in an installed package
* looking to see if a ‘data/datalist’ file should be added
* building ‘seq2pathway_1.35.0.tar.gz’