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This page was generated on 2024-04-29 11:38:34 -0400 (Mon, 29 Apr 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.3 LTS)x86_644.4.0 beta (2024-04-15 r86425) -- "Puppy Cup" 4752
palomino3Windows Server 2022 Datacenterx644.4.0 beta (2024-04-15 r86425 ucrt) -- "Puppy Cup" 4486
lconwaymacOS 12.7.1 Montereyx86_644.4.0 beta (2024-04-14 r86421) -- "Puppy Cup" 4518
kunpeng2Linux (openEuler 22.03 LTS-SP1)aarch644.4.0 beta (2024-04-15 r86425) -- "Puppy Cup" 4475
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1552/2300HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
phemd 1.19.1  (landing page)
William S Chen
Snapshot Date: 2024-04-28 14:00:16 -0400 (Sun, 28 Apr 2024)
git_url: https://git.bioconductor.org/packages/phemd
git_branch: devel
git_last_commit: b26beb4
git_last_commit_date: 2024-04-09 08:43:49 -0400 (Tue, 09 Apr 2024)
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    ERROR  skipped
palomino3Windows Server 2022 Datacenter / x64  OK    ERROR  skippedskipped
lconwaymacOS 12.7.1 Monterey / x86_64  OK    ERROR  skippedskipped
kunpeng2Linux (openEuler 22.03 LTS-SP1) / aarch64  OK    ERROR  skipped
kjohnson3macOS 13.6.5 Ventura / arm64see weekly results here

BUILD results for phemd on palomino3


To the developers/maintainers of the phemd package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/phemd.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: phemd
Version: 1.19.1
Command: chmod a+r phemd -R && F:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data phemd
StartedAt: 2024-04-28 20:59:44 -0400 (Sun, 28 Apr 2024)
EndedAt: 2024-04-28 21:01:31 -0400 (Sun, 28 Apr 2024)
EllapsedTime: 106.8 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   chmod a+r phemd -R && F:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data phemd
###
##############################################################################
##############################################################################


* checking for file 'phemd/DESCRIPTION' ... OK
* preparing 'phemd':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'phemd.Rmd' using rmarkdown

Quitting from lines  at lines 72-74 [unnamed-chunk-4] (phemd.Rmd)
Error: processing vignette 'phemd.Rmd' failed with diagnostics:
invalid class "Phemd" object: invalid object for slot "version" in class "Phemd": got class "object", should be or extend class "package_version"
--- failed re-building 'phemd.Rmd'

SUMMARY: processing the following file failed:
  'phemd.Rmd'

Error: Vignette re-building failed.
Execution halted