Multiple platform build/check report for BioC 3.20 - INSTALL results for nanotatoR on palomino4

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This page was generated on 2024-05-10 11:37:20 -0400 (Fri, 10 May 2024).

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo2	Linux (Ubuntu 22.04.3 LTS)	x86_64	4.4.0 RC (2024-04-16 r86468) -- "Puppy Cup"	4662
palomino4	Windows Server 2022 Datacenter	x64	4.4.0 RC (2024-04-16 r86468 ucrt) -- "Puppy Cup"	4393
merida1	macOS 12.7.4 Monterey	x86_64	4.4.0 Patched (2024-04-24 r86482) -- "Puppy Cup"	4424
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

nanotatoR 1.21.0 (landing page)
Surajit Bhattacharya

Snapshot Date: 2024-05-08 14:05:06 -0400 (Wed, 08 May 2024)

git_url: https://git.bioconductor.org/packages/nanotatoR

git_branch: devel

git_last_commit: 9b33ad2

git_last_commit_date: 2024-04-30 11:14:34 -0400 (Tue, 30 Apr 2024)

nebbiolo2

Linux (Ubuntu 22.04.3 LTS) / x86_64

ERROR

skipped

palomino4

Windows Server 2022 Datacenter / x64

ERROR

skipped

merida1

macOS 12.7.4 Monterey / x86_64

ERROR

skipped

kjohnson1

macOS 13.6.6 Ventura / arm64

see weekly results here

INSTALL results for nanotatoR on palomino4

To the developers/maintainers of the nanotatoR package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/nanotatoR.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: nanotatoR

Version: 1.21.0

Command: F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD INSTALL nanotatoR

StartedAt: 2024-05-08 16:49:11 -0400 (Wed, 08 May 2024)

EndedAt: 2024-05-08 16:49:11 -0400 (Wed, 08 May 2024)

EllapsedTime: 0.4 seconds

RetCode: 1

Status: ERROR

Command output

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### Running command:
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###   F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD INSTALL nanotatoR
###
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* installing to library 'F:/biocbuild/bbs-3.20-bioc/R/library'
ERROR: dependencies 'VarfromPDB', 'XML2R' are not available for package 'nanotatoR'
* removing 'F:/biocbuild/bbs-3.20-bioc/R/library/nanotatoR'