Britta Velten
| Snapshot Date: 2024-04-30 20:18:44 -0400 (Tue, 30 Apr 2024) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: RELEASE_3_19 |
| git_last_commit: a4dfa52 |
| git_last_commit_date: 2024-04-30 11:11:42 -0400 (Tue, 30 Apr 2024) |
| Back to Multiple platform build/check report for BioC 3.19: simplified long |
|
This page was generated on 2024-05-01 11:35:54 -0400 (Wed, 01 May 2024).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.4.0 beta (2024-04-15 r86425) -- "Puppy Cup" | 4753 |
| lconway | macOS 12.7.1 Monterey | x86_64 | 4.4.0 beta (2024-04-14 r86421) -- "Puppy Cup" | 4518 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 908/2300 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.20.0 (landing page) Britta Velten
| nebbiolo1 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| lconway | macOS 12.7.1 Monterey / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| kjohnson3 | macOS 13.6.5 Ventura / arm64 | see weekly results here | ||||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.20.0 |
| Command: /home/biocbuild/bbs-3.19-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.19-bioc/R/site-library --timings graper_1.20.0.tar.gz |
| StartedAt: 2024-05-01 06:01:18 -0400 (Wed, 01 May 2024) |
| EndedAt: 2024-05-01 06:02:40 -0400 (Wed, 01 May 2024) |
| EllapsedTime: 82.3 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
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###
### Running command:
###
### /home/biocbuild/bbs-3.19-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.19-bioc/R/site-library --timings graper_1.20.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.19-bioc/meat/graper.Rcheck’
* using R version 4.4.0 beta (2024-04-15 r86425)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0
GNU Fortran (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0
* running under: Ubuntu 22.04.4 LTS
* using session charset: UTF-8
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.20.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0’
* checking C++ specification ... NOTE
Specified C++11: please drop specification unless essential
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 3 NOTEs
See
‘/home/biocbuild/bbs-3.19-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.19-bioc/R/bin/R CMD INSTALL graper
###
##############################################################################
##############################################################################
* installing to library ‘/home/biocbuild/bbs-3.19-bioc/R/site-library’
* installing *source* package ‘graper’ ...
** using staged installation
** libs
using C++ compiler: ‘g++ (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0’
using C++11
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.19-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.19-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.19-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.19-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.19-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.19-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.19-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.19-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -c fit_graper.cpp -o fit_graper.o
In file included from /home/biocbuild/bbs-3.19-bioc/R/site-library/BH/include/boost/math/special_functions/detail/round_fwd.hpp:11,
from /home/biocbuild/bbs-3.19-bioc/R/site-library/BH/include/boost/math/special_functions/math_fwd.hpp:29,
from /home/biocbuild/bbs-3.19-bioc/R/site-library/BH/include/boost/math/special_functions/digamma.hpp:15,
from graper_linear_dense_ff.h:2,
from fit_graper.cpp:4:
/home/biocbuild/bbs-3.19-bioc/R/site-library/BH/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp]
23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)"
| ^~~~~~~
g++ -std=gnu++11 -shared -L/home/biocbuild/bbs-3.19-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.19-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.19-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.19-bioc/R/site-library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.4.0 beta (2024-04-15 r86425) -- "Puppy Cup"
Copyright (C) 2024 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-828.652
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-585.78
ELB improved by 242.872
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-524.928
ELB improved by 60.8525
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-477.808
ELB improved by 47.1195
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.866
ELB improved by 22.9417
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.582
ELB improved by 8.28459
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.981
ELB improved by 3.60041
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.852
ELB improved by 2.12897
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.285
ELB improved by 1.56719
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.986
ELB improved by 1.29924
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.856
ELB improved by 1.12994
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.858
ELB improved by 0.998226
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.971
ELB improved by 0.887002
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.179
ELB improved by 0.791829
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.467
ELB improved by 0.711766
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.821
ELB improved by 0.646711
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.224
ELB improved by 0.596689
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.662
ELB improved by 0.561749
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.12
ELB improved by 0.542073
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.582
ELB improved by 0.538121
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.031
ELB improved by 0.550752
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.45
ELB improved by 0.581284
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.818
ELB improved by 0.631423
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.115
ELB improved by 0.703048
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.318
ELB improved by 0.797859
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.401
ELB improved by 0.917012
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.34
ELB improved by 1.06097
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.11
ELB improved by 1.22962
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.688
ELB improved by 1.42201
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.054
ELB improved by 1.63365
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.204
ELB improved by 1.85018
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.163
ELB improved by 2.04086
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415
ELB improved by 2.1628
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.815
ELB improved by 2.18518
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.704
ELB improved by 2.11091
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.752
ELB improved by 1.95268
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.083
ELB improved by 1.66885
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.836
ELB improved by 1.24732
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.973
ELB improved by 0.862263
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.366
ELB improved by 0.60727
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.931
ELB improved by 0.434627
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.63
ELB improved by 0.301351
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.425
ELB improved by 0.20483
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.282
ELB improved by 0.14347
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.175
ELB improved by 0.10634
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.092
ELB improved by 0.0832125
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.024
ELB improved by 0.0678997
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.967
ELB improved by 0.0570917
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.918
ELB improved by 0.0490336
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.875
ELB improved by 0.0427638
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.838
ELB improved by 0.0377275
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.804
ELB improved by 0.0335856
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.774
ELB improved by 0.0301183
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.747
ELB improved by 0.0271756
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.722
ELB improved by 0.0246505
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.7
ELB improved by 0.0224639
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.679
ELB improved by 0.0205562
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.66
ELB improved by 0.0188808
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.643
ELB improved by 0.0174011
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.627
ELB improved by 0.0160879
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.612
ELB improved by 0.0149173
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.598
ELB improved by 0.0138701
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.585
ELB improved by 0.0129301
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.573
ELB improved by 0.0120837
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.562
ELB improved by 0.0113199
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.551
ELB improved by 0.0106289
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.541
ELB improved by 0.0100027
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.532
ELB improved by 0.00943421
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-885.168
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-581.18
ELB improved by 303.987
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-523.61
ELB improved by 57.5704
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-484.247
ELB improved by 39.3634
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-466.174
ELB improved by 18.0722
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.456
ELB improved by 7.71867
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.854
ELB improved by 4.60135
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.987
ELB improved by 3.86753
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.179
ELB improved by 3.80788
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.208
ELB improved by 3.9711
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.121
ELB improved by 4.08645
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.201
ELB improved by 3.92021
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.825
ELB improved by 3.37609
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.23
ELB improved by 2.59522
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.403
ELB improved by 1.82659
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.166
ELB improved by 1.23719
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.31
ELB improved by 0.856319
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.676
ELB improved by 0.633441
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.168
ELB improved by 0.50821
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.73
ELB improved by 0.438484
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.329
ELB improved by 0.400293
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.948
ELB improved by 0.381099
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.574
ELB improved by 0.374409
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.197
ELB improved by 0.3766
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.812
ELB improved by 0.385161
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.414
ELB improved by 0.397774
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.002
ELB improved by 0.412166
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.576
ELB improved by 0.426556
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.136
ELB improved by 0.440057
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.683
ELB improved by 0.4525
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.219
ELB improved by 0.464017
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.744
ELB improved by 0.474755
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.26
ELB improved by 0.484672
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.766
ELB improved by 0.493284
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.267
ELB improved by 0.499455
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.765
ELB improved by 0.501417
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.268
ELB improved by 0.497083
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.784
ELB improved by 0.484647
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.32
ELB improved by 0.463267
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.887
ELB improved by 0.433535
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.489
ELB improved by 0.397452
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.132
ELB improved by 0.357895
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.814
ELB improved by 0.317903
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.534
ELB improved by 0.280111
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.287
ELB improved by 0.246442
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.069
ELB improved by 0.217949
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.875
ELB improved by 0.194612
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.699
ELB improved by 0.175121
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.542
ELB improved by 0.15703
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.404
ELB improved by 0.137965
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.287
ELB improved by 0.117489
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.19
ELB improved by 0.0974241
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.11
ELB improved by 0.0799347
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.044
ELB improved by 0.0659113
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.989
ELB improved by 0.0550783
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.942
ELB improved by 0.0467556
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.902
ELB improved by 0.0403119
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.866
ELB improved by 0.0352754
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.835
ELB improved by 0.0313138
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.807
ELB improved by 0.0281938
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.781
ELB improved by 0.0257511
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.757
ELB improved by 0.0238723
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.735
ELB improved by 0.0224861
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.713
ELB improved by 0.02156
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.692
ELB improved by 0.0211039
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.671
ELB improved by 0.0211813
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.649
ELB improved by 0.0219359
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.625
ELB improved by 0.0236442
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.598
ELB improved by 0.0268263
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.566
ELB improved by 0.0324814
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.523
ELB improved by 0.0426068
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.462
ELB improved by 0.0613451
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.365
ELB improved by 0.0972257
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.2
ELB improved by 0.165219
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.921
ELB improved by 0.278716
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.485
ELB improved by 0.436
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.796
ELB improved by 0.688567
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.749
ELB improved by 1.04718
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.424
ELB improved by 1.32542
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.798
ELB improved by 1.62533
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.651
ELB improved by 1.147
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.163
ELB improved by 0.488496
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.945
ELB improved by 0.217422
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.781
ELB improved by 0.164023
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.576
ELB improved by 0.20505
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.293
ELB improved by 0.283047
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.957
ELB improved by 0.336731
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.623
ELB improved by 0.333512
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.307
ELB improved by 0.315762
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.962
ELB improved by 0.345456
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.552
ELB improved by 0.409903
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.121
ELB improved by 0.430772
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.735
ELB improved by 0.385783
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.43
ELB improved by 0.305145
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.21
ELB improved by 0.219734
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.052
ELB improved by 0.158571
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.922
ELB improved by 0.129546
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.802
ELB improved by 0.120863
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.684
ELB improved by 0.117304
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.573
ELB improved by 0.111269
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.469
ELB improved by 0.103951
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.371
ELB improved by 0.0980705
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.278
ELB improved by 0.0928169
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.193
ELB improved by 0.085178
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.119
ELB improved by 0.0736747
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.059
ELB improved by 0.0599748
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.012
ELB improved by 0.0469679
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.976
ELB improved by 0.036443
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.947
ELB improved by 0.0287254
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.924
ELB improved by 0.0233808
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.904
ELB improved by 0.0198149
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.886
ELB improved by 0.0175327
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.87
ELB improved by 0.0161979
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.855
ELB improved by 0.0156198
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.839
ELB improved by 0.0157329
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.822
ELB improved by 0.0165905
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.804
ELB improved by 0.0183833
iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.782
ELB improved by 0.0214881
iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.756
ELB improved by 0.0265485
iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.721
ELB improved by 0.0345497
iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.675
ELB improved by 0.0467159
iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.611
ELB improved by 0.0637594
iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.527
ELB improved by 0.0838889
iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.426
ELB improved by 0.100718
iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.32
ELB improved by 0.105769
iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.224
ELB improved by 0.0963013
iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.146
ELB improved by 0.0780504
iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.087
ELB improved by 0.0590305
iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.043
ELB improved by 0.0437472
iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.01
ELB improved by 0.0328988
iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.985
ELB improved by 0.0255659
iteration 132
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.964
ELB improved by 0.0206823
iteration 133
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.947
ELB improved by 0.0174578
iteration 134
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.931
ELB improved by 0.0153748
iteration 135
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.917
ELB improved by 0.0141071
iteration 136
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.904
ELB improved by 0.0134526
iteration 137
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.89
ELB improved by 0.0132868
iteration 138
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.877
ELB improved by 0.013528
iteration 139
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.863
ELB improved by 0.0141062
iteration 140
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.848
ELB improved by 0.0149275
iteration 141
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.832
ELB improved by 0.0158358
iteration 142
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.816
ELB improved by 0.0165825
iteration 143
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.799
ELB improved by 0.0168407
iteration 144
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.782
ELB improved by 0.0163003
iteration 145
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.768
ELB improved by 0.0148332
iteration 146
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.755
ELB improved by 0.012616
iteration 147
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.745
ELB improved by 0.010076
iteration 148
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.737
ELB improved by 0.00767673
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-877.352
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-579.536
ELB improved by 297.815
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-520.932
ELB improved by 58.6043
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-485.371
ELB improved by 35.5608
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-469.544
ELB improved by 15.8276
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.346
ELB improved by 7.19739
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.798
ELB improved by 4.54873
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.708
ELB improved by 4.08989
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.471
ELB improved by 4.23681
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445
ELB improved by 4.4706
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.551
ELB improved by 4.44967
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.582
ELB improved by 3.96884
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.416
ELB improved by 3.16629
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.054
ELB improved by 2.36141
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.329
ELB improved by 1.72525
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.043
ELB improved by 1.28596
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.027
ELB improved by 1.01571
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.169
ELB improved by 0.858731
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.4
ELB improved by 0.768996
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.679
ELB improved by 0.72044
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.978
ELB improved by 0.700956
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.273
ELB improved by 0.704956
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.547
ELB improved by 0.726182
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.793
ELB improved by 0.75413
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.01
ELB improved by 0.78292
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.185
ELB improved by 0.824664
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.289
ELB improved by 0.895834
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.321
ELB improved by 0.968433
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.341
ELB improved by 0.979701
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.393
ELB improved by 0.947832
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.472
ELB improved by 0.921874
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.565
ELB improved by 0.906258
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.676
ELB improved by 0.889537
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.814
ELB improved by 0.862065
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.995
ELB improved by 0.818722
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.233
ELB improved by 0.76242
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.523
ELB improved by 0.709326
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.841
ELB improved by 0.682265
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.188
ELB improved by 0.652881
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.652
ELB improved by 0.536359
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.279
ELB improved by 0.372755
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.031
ELB improved by 0.24832
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.858
ELB improved by 0.172456
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.731
ELB improved by 0.127288
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.632
ELB improved by 0.0989655
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.552
ELB improved by 0.0799394
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.486
ELB improved by 0.0663497
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.43
ELB improved by 0.0561679
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.381
ELB improved by 0.0482605
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.339
ELB improved by 0.0419512
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.303
ELB improved by 0.0368113
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.27
ELB improved by 0.0325551
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.241
ELB improved by 0.0289844
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.215
ELB improved by 0.0259567
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.192
ELB improved by 0.0233672
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.171
ELB improved by 0.0211371
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.151
ELB improved by 0.0192057
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.134
ELB improved by 0.0175259
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.118
ELB improved by 0.0160604
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.103
ELB improved by 0.0147797
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.089
ELB improved by 0.0136603
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.077
ELB improved by 0.0126834
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.065
ELB improved by 0.0118345
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.054
ELB improved by 0.0111029
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.043
ELB improved by 0.0104818
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.033
ELB improved by 0.00996826
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-878.822
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-554.72
ELB improved by 324.102
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-502.091
ELB improved by 52.6295
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-472.854
ELB improved by 29.2366
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.918
ELB improved by 14.9358
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.133
ELB improved by 7.78529
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.85
ELB improved by 5.28304
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.117
ELB improved by 4.73255
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.261
ELB improved by 4.85638
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.956
ELB improved by 5.30458
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.171
ELB improved by 5.78492
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.473
ELB improved by 5.69835
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.758
ELB improved by 4.71528
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.352
ELB improved by 3.40624
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.014
ELB improved by 2.33801
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.409
ELB improved by 1.60503
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.273
ELB improved by 1.13582
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.417
ELB improved by 0.855814
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.72
ELB improved by 0.696942
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.111
ELB improved by 0.609116
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.549
ELB improved by 0.562191
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.009
ELB improved by 0.539558
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.477
ELB improved by 0.532064
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.943
ELB improved by 0.534458
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.399
ELB improved by 0.54371
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.841
ELB improved by 0.558322
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.262
ELB improved by 0.57809
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.658
ELB improved by 0.604037
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.02
ELB improved by 0.638485
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.334
ELB improved by 0.685462
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.583
ELB improved by 0.751747
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.735
ELB improved by 0.847762
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.755
ELB improved by 0.980457
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.633
ELB improved by 1.12115
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.435
ELB improved by 1.1983
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.231
ELB improved by 1.20435
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.021
ELB improved by 1.20925
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.739
ELB improved by 1.28262
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.35
ELB improved by 1.38852
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.054
ELB improved by 1.29607
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.998
ELB improved by 1.0559
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.236
ELB improved by 0.762309
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.757
ELB improved by 0.478769
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.457
ELB improved by 0.299836
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.253
ELB improved by 0.204541
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.101
ELB improved by 0.152322
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.98
ELB improved by 0.120867
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.88
ELB improved by 0.0993127
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.798
ELB improved by 0.0823369
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.73
ELB improved by 0.067676
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.676
ELB improved by 0.0548827
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.631
ELB improved by 0.0442059
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.596
ELB improved by 0.0357586
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.566
ELB improved by 0.0292986
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.542
ELB improved by 0.0244007
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.521
ELB improved by 0.02065
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.503
ELB improved by 0.0177234
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.488
ELB improved by 0.0153928
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.475
ELB improved by 0.013502
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.463
ELB improved by 0.0119438
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.452
ELB improved by 0.0106436
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.442
ELB improved by 0.0095477
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.051 0.187 2.227
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.053 | 0.023 | 0.077 | |
| getPIPs | 0.052 | 0.012 | 0.063 | |
| graper | 0.086 | 0.016 | 0.102 | |
| makeExampleData | 0.007 | 0.004 | 0.011 | |
| makeExampleDataWithUnequalGroups | 0.013 | 0.000 | 0.013 | |
| plotELBO | 0.204 | 0.039 | 0.244 | |
| plotGroupPenalties | 0.644 | 0.012 | 0.656 | |
| plotPosterior | 0.515 | 0.019 | 0.535 | |
| predict.graper | 2.075 | 0.065 | 2.139 | |
| print.graper | 0.052 | 0.011 | 0.063 | |