Greg Finak
| Snapshot Date: 2024-03-27 14:00:18 -0400 (Wed, 27 Mar 2024) |
| git_url: https://git.bioconductor.org/packages/flowWorkspace |
| git_branch: devel |
| git_last_commit: 3951e19 |
| git_last_commit_date: 2024-03-16 19:33:52 -0400 (Sat, 16 Mar 2024) |
| Back to Multiple platform build/check report for BioC 3.19: simplified long |
|
This page was generated on 2024-03-28 11:40:43 -0400 (Thu, 28 Mar 2024).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | R Under development (unstable) (2024-03-18 r86148) -- "Unsuffered Consequences" | 4708 |
| palomino3 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2024-03-16 r86144 ucrt) -- "Unsuffered Consequences" | 4446 |
| lconway | macOS 12.7.1 Monterey | x86_64 | R Under development (unstable) (2024-03-18 r86148) -- "Unsuffered Consequences" | 4471 |
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) | aarch64 | R Under development (unstable) (2024-03-19 r86153) -- "Unsuffered Consequences" | 4426 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 750/2270 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| flowWorkspace 4.15.5 (landing page) Greg Finak
| nebbiolo1 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| palomino3 | Windows Server 2022 Datacenter / x64 | OK | OK | WARNINGS | OK | | ||||||||
| lconway | macOS 12.7.1 Monterey / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) / aarch64 | OK | OK | WARNINGS | ||||||||||
|
To the developers/maintainers of the flowWorkspace package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/flowWorkspace.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. - See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host. |
| Package: flowWorkspace |
| Version: 4.15.5 |
| Command: /home/biocbuild/R/R-4.4-devel-2024.03.20/bin/R CMD INSTALL flowWorkspace |
| StartedAt: 2024-03-27 19:38:59 -0000 (Wed, 27 Mar 2024) |
| EndedAt: 2024-03-27 19:42:48 -0000 (Wed, 27 Mar 2024) |
| EllapsedTime: 228.5 seconds |
| RetCode: 0 |
| Status: OK |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/R/R-4.4-devel-2024.03.20/bin/R CMD INSTALL flowWorkspace
###
##############################################################################
##############################################################################
* installing to library ‘/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library’
* installing *source* package ‘flowWorkspace’ ...
** using staged installation
** libs
using C++ compiler: ‘g++ (GCC) 10.3.1’
using C++17
g++ -std=gnu++17 -I"/home/biocbuild/R/R-4.4-devel-2024.03.20/include" -DNDEBUG -DROUT -I../inst/include -DBOOST_NO_AUTO_PTR -Wno-pedantic -w -Wfatal-errors -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cpp11/include' -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/BH/include' -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/RProtoBufLib/include' -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include' -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/Rhdf5lib/include' -I/usr/local/include -fPIC -g -O2 -Wall -c R_API.cpp -o R_API.o
In file included from /home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include/cytolib/GatingHierarchy.hpp:21,
from /home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include/cytolib/GatingSet.hpp:14,
from R_API.cpp:9:
/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include/cytolib/CytoFrameView.hpp: In member function ‘std::pair<double, double> cytolib::CytoFrameView::get_range(const string&, cytolib::ColType, cytolib::RangeType) const’:
/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include/cytolib/CytoFrameView.hpp:260:2: note: parameter passing for argument of type ‘std::pair<double, double>’ when C++17 is enabled changed to match C++14 in GCC 10.1
260 | {
| ^
g++ -std=gnu++17 -I"/home/biocbuild/R/R-4.4-devel-2024.03.20/include" -DNDEBUG -DROUT -I../inst/include -DBOOST_NO_AUTO_PTR -Wno-pedantic -w -Wfatal-errors -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cpp11/include' -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/BH/include' -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/RProtoBufLib/include' -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include' -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/Rhdf5lib/include' -I/usr/local/include -fPIC -g -O2 -Wall -c R_GatingHierarchy.cpp -o R_GatingHierarchy.o
In file included from /home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include/cytolib/GatingHierarchy.hpp:21,
from /home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include/cytolib/GatingSet.hpp:14,
from R_GatingHierarchy.cpp:18:
/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include/cytolib/CytoFrameView.hpp: In member function ‘std::pair<double, double> cytolib::CytoFrameView::get_range(const string&, cytolib::ColType, cytolib::RangeType) const’:
/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include/cytolib/CytoFrameView.hpp:260:2: note: parameter passing for argument of type ‘std::pair<double, double>’ when C++17 is enabled changed to match C++14 in GCC 10.1
260 | {
| ^
In file included from /usr/include/c++/10.3.1/bits/stl_algobase.h:64,
from /usr/include/c++/10.3.1/bits/specfun.h:45,
from /usr/include/c++/10.3.1/cmath:1927,
from /home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cpp11/include/cpp11/as.hpp:3,
from /home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cpp11/include/cpp11.hpp:5,
from R_GatingHierarchy.cpp:16:
/usr/include/c++/10.3.1/bits/stl_pair.h: In instantiation of ‘constexpr std::pair<typename std::__strip_reference_wrapper<typename std::decay<_Tp>::type>::__type, typename std::__strip_reference_wrapper<typename std::decay<_Tp2>::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = float; _T2 = float; typename std::__strip_reference_wrapper<typename std::decay<_Tp2>::type>::__type = float; typename std::__strip_reference_wrapper<typename std::decay<_Tp>::type>::__type = float]’:
R_GatingHierarchy.cpp:825:65: required from here
/usr/include/c++/10.3.1/bits/stl_pair.h:567:5: note: parameter passing for argument of type ‘std::pair<float, float>’ when C++17 is enabled changed to match C++14 in GCC 10.1
567 | make_pair(_T1&& __x, _T2&& __y)
| ^~~~~~~~~
In file included from /home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include/cytolib/CytoFrameView.hpp:13,
from /home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include/cytolib/GatingHierarchy.hpp:21,
from /home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include/cytolib/GatingSet.hpp:14,
from R_GatingHierarchy.cpp:18:
/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include/cytolib/H5CytoFrame.hpp: In member function ‘virtual void cytolib::H5CytoFrame::set_range(const string&, cytolib::ColType, std::pair<double, double>, bool)’:
/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include/cytolib/H5CytoFrame.hpp:204:7: note: parameter passing for argument of type ‘std::pair<double, double>’ when C++17 is enabled changed to match C++14 in GCC 10.1
204 | void set_range(const string & colname, ColType ctype, pair<EVENT_DATA_TYPE, EVENT_DATA_TYPE> new_range, bool is_update_keywords = true){
| ^~~~~~~~~
g++ -std=gnu++17 -I"/home/biocbuild/R/R-4.4-devel-2024.03.20/include" -DNDEBUG -DROUT -I../inst/include -DBOOST_NO_AUTO_PTR -Wno-pedantic -w -Wfatal-errors -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cpp11/include' -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/BH/include' -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/RProtoBufLib/include' -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include' -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/Rhdf5lib/include' -I/usr/local/include -fPIC -g -O2 -Wall -c R_GatingSet.cpp -o R_GatingSet.o
In file included from flowWorkspace_types.h:7,
from R_GatingSet.cpp:10:
/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include/cytolib/CytoFrameView.hpp: In member function ‘std::pair<double, double> cytolib::CytoFrameView::get_range(const string&, cytolib::ColType, cytolib::RangeType) const’:
/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include/cytolib/CytoFrameView.hpp:260:2: note: parameter passing for argument of type ‘std::pair<double, double>’ when C++17 is enabled changed to match C++14 in GCC 10.1
260 | {
| ^
g++ -std=gnu++17 -I"/home/biocbuild/R/R-4.4-devel-2024.03.20/include" -DNDEBUG -DROUT -I../inst/include -DBOOST_NO_AUTO_PTR -Wno-pedantic -w -Wfatal-errors -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cpp11/include' -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/BH/include' -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/RProtoBufLib/include' -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include' -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/Rhdf5lib/include' -I/usr/local/include -fPIC -g -O2 -Wall -c cpp11.cpp -o cpp11.o
In file included from flowWorkspace_types.h:7,
from cpp11.cpp:4:
/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include/cytolib/CytoFrameView.hpp: In member function ‘std::pair<double, double> cytolib::CytoFrameView::get_range(const string&, cytolib::ColType, cytolib::RangeType) const’:
/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include/cytolib/CytoFrameView.hpp:260:2: note: parameter passing for argument of type ‘std::pair<double, double>’ when C++17 is enabled changed to match C++14 in GCC 10.1
260 | {
| ^
g++ -std=gnu++17 -I"/home/biocbuild/R/R-4.4-devel-2024.03.20/include" -DNDEBUG -DROUT -I../inst/include -DBOOST_NO_AUTO_PTR -Wno-pedantic -w -Wfatal-errors -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cpp11/include' -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/BH/include' -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/RProtoBufLib/include' -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include' -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/Rhdf5lib/include' -I/usr/local/include -fPIC -g -O2 -Wall -c cytoframeAPI.cpp -o cytoframeAPI.o
In file included from cytoframeAPI.cpp:5:
/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include/cytolib/CytoFrameView.hpp: In member function ‘std::pair<double, double> cytolib::CytoFrameView::get_range(const string&, cytolib::ColType, cytolib::RangeType) const’:
/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include/cytolib/CytoFrameView.hpp:260:2: note: parameter passing for argument of type ‘std::pair<double, double>’ when C++17 is enabled changed to match C++14 in GCC 10.1
260 | {
| ^
g++ -std=gnu++17 -I"/home/biocbuild/R/R-4.4-devel-2024.03.20/include" -DNDEBUG -DROUT -I../inst/include -DBOOST_NO_AUTO_PTR -Wno-pedantic -w -Wfatal-errors -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cpp11/include' -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/BH/include' -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/RProtoBufLib/include' -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include' -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/Rhdf5lib/include' -I/usr/local/include -fPIC -g -O2 -Wall -c cytosetAPI.cpp -o cytosetAPI.o
In file included from /home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include/cytolib/GatingHierarchy.hpp:21,
from /home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include/cytolib/GatingSet.hpp:14,
from ../inst/include/flowWorkspace/pairVectorCpp11Convert.h:12,
from cytosetAPI.cpp:2:
/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include/cytolib/CytoFrameView.hpp: In member function ‘std::pair<double, double> cytolib::CytoFrameView::get_range(const string&, cytolib::ColType, cytolib::RangeType) const’:
/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include/cytolib/CytoFrameView.hpp:260:2: note: parameter passing for argument of type ‘std::pair<double, double>’ when C++17 is enabled changed to match C++14 in GCC 10.1
260 | {
| ^
g++ -std=gnu++17 -I"/home/biocbuild/R/R-4.4-devel-2024.03.20/include" -DNDEBUG -DROUT -I../inst/include -DBOOST_NO_AUTO_PTR -Wno-pedantic -w -Wfatal-errors -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cpp11/include' -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/BH/include' -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/RProtoBufLib/include' -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include' -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/Rhdf5lib/include' -I/usr/local/include -fPIC -g -O2 -Wall -c getDescendants.cpp -o getDescendants.o
In file included from /home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include/cytolib/GatingHierarchy.hpp:21,
from /home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include/cytolib/GatingSet.hpp:14,
from getDescendants.cpp:1:
/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include/cytolib/CytoFrameView.hpp: In member function ‘std::pair<double, double> cytolib::CytoFrameView::get_range(const string&, cytolib::ColType, cytolib::RangeType) const’:
/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include/cytolib/CytoFrameView.hpp:260:2: note: parameter passing for argument of type ‘std::pair<double, double>’ when C++17 is enabled changed to match C++14 in GCC 10.1
260 | {
| ^
g++ -std=gnu++17 -I"/home/biocbuild/R/R-4.4-devel-2024.03.20/include" -DNDEBUG -DROUT -I../inst/include -DBOOST_NO_AUTO_PTR -Wno-pedantic -w -Wfatal-errors -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cpp11/include' -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/BH/include' -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/RProtoBufLib/include' -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include' -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/Rhdf5lib/include' -I/usr/local/include -fPIC -g -O2 -Wall -c getPopStats.cpp -o getPopStats.o
In file included from /home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include/cytolib/GatingHierarchy.hpp:21,
from /home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include/cytolib/GatingSet.hpp:14,
from getPopStats.cpp:1:
/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include/cytolib/CytoFrameView.hpp: In member function ‘std::pair<double, double> cytolib::CytoFrameView::get_range(const string&, cytolib::ColType, cytolib::RangeType) const’:
/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include/cytolib/CytoFrameView.hpp:260:2: note: parameter passing for argument of type ‘std::pair<double, double>’ when C++17 is enabled changed to match C++14 in GCC 10.1
260 | {
| ^
g++ -std=gnu++17 -I"/home/biocbuild/R/R-4.4-devel-2024.03.20/include" -DNDEBUG -DROUT -I../inst/include -DBOOST_NO_AUTO_PTR -Wno-pedantic -w -Wfatal-errors -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cpp11/include' -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/BH/include' -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/RProtoBufLib/include' -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include' -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/Rhdf5lib/include' -I/usr/local/include -fPIC -g -O2 -Wall -c getSingleCellExpression.cpp -o getSingleCellExpression.o
In file included from /home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include/cytolib/GatingHierarchy.hpp:21,
from /home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include/cytolib/GatingSet.hpp:14,
from getSingleCellExpression.cpp:1:
/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include/cytolib/CytoFrameView.hpp: In member function ‘std::pair<double, double> cytolib::CytoFrameView::get_range(const string&, cytolib::ColType, cytolib::RangeType) const’:
/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include/cytolib/CytoFrameView.hpp:260:2: note: parameter passing for argument of type ‘std::pair<double, double>’ when C++17 is enabled changed to match C++14 in GCC 10.1
260 | {
| ^
g++ -std=gnu++17 -I"/home/biocbuild/R/R-4.4-devel-2024.03.20/include" -DNDEBUG -DROUT -I../inst/include -DBOOST_NO_AUTO_PTR -Wno-pedantic -w -Wfatal-errors -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cpp11/include' -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/BH/include' -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/RProtoBufLib/include' -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include' -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/Rhdf5lib/include' -I/usr/local/include -fPIC -g -O2 -Wall -c h5_error_r_handler.cpp -o h5_error_r_handler.o
In file included from /home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include/cytolib/GatingHierarchy.hpp:21,
from /home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include/cytolib/GatingSet.hpp:14,
from ../inst/include/flowWorkspace/pairVectorCpp11Convert.h:12,
from h5_error_r_handler.cpp:8:
/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include/cytolib/CytoFrameView.hpp: In member function ‘std::pair<double, double> cytolib::CytoFrameView::get_range(const string&, cytolib::ColType, cytolib::RangeType) const’:
/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include/cytolib/CytoFrameView.hpp:260:2: note: parameter passing for argument of type ‘std::pair<double, double>’ when C++17 is enabled changed to match C++14 in GCC 10.1
260 | {
| ^
g++ -std=gnu++17 -I"/home/biocbuild/R/R-4.4-devel-2024.03.20/include" -DNDEBUG -DROUT -I../inst/include -DBOOST_NO_AUTO_PTR -Wno-pedantic -w -Wfatal-errors -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cpp11/include' -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/BH/include' -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/RProtoBufLib/include' -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include' -I'/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/Rhdf5lib/include' -I/usr/local/include -fPIC -g -O2 -Wall -c setCounts.cpp -o setCounts.o
In file included from /home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include/cytolib/GatingHierarchy.hpp:21,
from /home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include/cytolib/GatingSet.hpp:14,
from setCounts.cpp:1:
/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include/cytolib/CytoFrameView.hpp: In member function ‘std::pair<double, double> cytolib::CytoFrameView::get_range(const string&, cytolib::ColType, cytolib::RangeType) const’:
/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/include/cytolib/CytoFrameView.hpp:260:2: note: parameter passing for argument of type ‘std::pair<double, double>’ when C++17 is enabled changed to match C++14 in GCC 10.1
260 | {
| ^
g++ -std=gnu++17 -shared -L/home/biocbuild/R/R-4.4-devel-2024.03.20/lib -L/usr/local/lib -o flowWorkspace.so R_API.o R_GatingHierarchy.o R_GatingSet.o cpp11.o cytoframeAPI.o cytosetAPI.o getDescendants.o getPopStats.o getSingleCellExpression.o h5_error_r_handler.o setCounts.o /home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/cytolib/lib/libcytolib.a /home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/Rhdf5lib/lib/libhdf5_cpp.a /home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/Rhdf5lib/lib/libhdf5.a -L/home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/Rhdf5lib/lib -lcrypto -lcurl -lsz -laec -lz -ldl -lm -lopenblas -L/home/biocbuild/R/R-4.4-devel-2024.03.20/lib -lR
installing to /home/biocbuild/R/R-4.4-devel-2024.03.20/site-library/00LOCK-flowWorkspace/00new/flowWorkspace/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (flowWorkspace)