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This page was generated on 2024-03-04 11:39:12 -0500 (Mon, 04 Mar 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.3 LTS)x86_64R Under development (unstable) (2024-01-16 r85808) -- "Unsuffered Consequences" 4676
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2024-01-14 r85805 ucrt) -- "Unsuffered Consequences" 4414
merida1macOS 12.7.1 Montereyx86_64R Under development (unstable) (2024-01-16 r85808) -- "Unsuffered Consequences" 4441
kunpeng2Linux (openEuler 22.03 LTS-SP1)aarch64R Under development (unstable) (2024-01-16 r85812) -- "Unsuffered Consequences" 4417
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 741/2251HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
flowTime 1.27.0  (landing page)
R. Clay Wright
Snapshot Date: 2024-03-01 14:00:22 -0500 (Fri, 01 Mar 2024)
git_url: https://git.bioconductor.org/packages/flowTime
git_branch: devel
git_last_commit: 929b977
git_last_commit_date: 2023-10-24 10:56:23 -0500 (Tue, 24 Oct 2023)
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    ERROR  skipped
palomino3Windows Server 2022 Datacenter / x64  OK    ERROR  skippedskipped
merida1macOS 12.7.1 Monterey / x86_64  OK    ERROR  skippedskipped
kunpeng2Linux (openEuler 22.03 LTS-SP1) / aarch64  OK    ERROR  skipped

BUILD results for flowTime on merida1


To the developers/maintainers of the flowTime package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/flowTime.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: flowTime
Version: 1.27.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data flowTime
StartedAt: 2024-03-01 19:10:07 -0500 (Fri, 01 Mar 2024)
EndedAt: 2024-03-01 19:10:53 -0500 (Fri, 01 Mar 2024)
EllapsedTime: 45.6 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data flowTime
###
##############################################################################
##############################################################################


* checking for file ‘flowTime/DESCRIPTION’ ... OK
* preparing ‘flowTime’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘gating-vignette.Rmd’ using rmarkdown

Quitting from lines 53-54 [unnamed-chunk-4] (gating-vignette.Rmd)
Error: processing vignette 'gating-vignette.Rmd' failed with diagnostics:
attempt to apply non-function
--- failed re-building ‘gating-vignette.Rmd’

--- re-building ‘steady-state-vignette.Rmd’ using rmarkdown
2024-03-01 19:10:45.035 R[62509:905700421] XType: com.apple.fonts is not accessible.
2024-03-01 19:10:45.036 R[62509:905700421] XType: XTFontStaticRegistry is enabled.
--- finished re-building ‘steady-state-vignette.Rmd’

--- re-building ‘time-course-vignette.Rmd’ using rmarkdown
--- finished re-building ‘time-course-vignette.Rmd’

SUMMARY: processing the following file failed:
  ‘gating-vignette.Rmd’

Error: Vignette re-building failed.
Execution halted