Robert Castelo
| Snapshot Date: 2023-11-28 14:00:17 -0500 (Tue, 28 Nov 2023) |
| git_url: https://git.bioconductor.org/packages/GSVA |
| git_branch: devel |
| git_last_commit: cc23576 |
| git_last_commit_date: 2023-10-24 09:46:46 -0500 (Tue, 24 Oct 2023) |
| Back to Multiple platform build/check report for BioC 3.19: simplified long |
|
This page was generated on 2023-11-29 11:38:12 -0500 (Wed, 29 Nov 2023).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 22.04.2 LTS) | x86_64 | R Under development (unstable) (2023-11-11 r85510) -- "Unsuffered Consequences" | 4601 |
| palomino3 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2023-11-14 r85524 ucrt) -- "Unsuffered Consequences" | 4343 |
| merida1 | macOS 12.7.1 Monterey | x86_64 | R Under development (unstable) (2023-11-11 r85510) -- "Unsuffered Consequences" | 4368 |
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) | aarch64 | R Under development (unstable) (2023-11-01 r85459) -- "Unsuffered Consequences" | 4253 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 903/2225 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| GSVA 1.51.0 (landing page) Robert Castelo
| nebbiolo1 | Linux (Ubuntu 22.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||||
| palomino3 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 12.7.1 Monterey / x86_64 | OK | OK | OK | OK | | ||||||||
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) / aarch64 | OK | OK | OK | ||||||||||
|
To the developers/maintainers of the GSVA package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/GSVA.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. - See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host. |
| Package: GSVA |
| Version: 1.51.0 |
| Command: /home/biocbuild/R/R-4.4-devel-2023.11.02/bin/R CMD INSTALL GSVA |
| StartedAt: 2023-11-28 21:29:19 -0000 (Tue, 28 Nov 2023) |
| EndedAt: 2023-11-28 21:30:11 -0000 (Tue, 28 Nov 2023) |
| EllapsedTime: 52.0 seconds |
| RetCode: 0 |
| Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R-4.4-devel-2023.11.02/bin/R CMD INSTALL GSVA ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/R/R-4.4-devel-2023.11.02/site-library’ * installing *source* package ‘GSVA’ ... ** using staged installation ** libs using C compiler: ‘gcc (GCC) 10.3.1’ gcc -I"/home/biocbuild/R/R-devel/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -Wall -c kernel_estimation.c -o kernel_estimation.o gcc -I"/home/biocbuild/R/R-devel/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -Wall -c ks_test.c -o ks_test.o gcc -I"/home/biocbuild/R/R-devel/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -Wall -c register_cmethods.c -o register_cmethods.o gcc -shared -L/home/biocbuild/R/R-devel/lib -L/usr/local/lib -o GSVA.so kernel_estimation.o ks_test.o register_cmethods.o -L/home/biocbuild/R/R-devel/lib -lR installing to /home/biocbuild/R/R-4.4-devel-2023.11.02/site-library/00LOCK-GSVA/00new/GSVA/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (GSVA)