Multiple platform build/check report for BioC 3.19 - BUILD results for CopyNumberPlots on kunpeng2

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This page was generated on 2023-12-02 11:38:37 -0500 (Sat, 02 Dec 2023).

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo1	Linux (Ubuntu 22.04.2 LTS)	x86_64	R Under development (unstable) (2023-11-11 r85510) -- "Unsuffered Consequences"	4601
palomino3	Windows Server 2022 Datacenter	x64	R Under development (unstable) (2023-11-14 r85524 ucrt) -- "Unsuffered Consequences"	4344
merida1	macOS 12.7.1 Monterey	x86_64	R Under development (unstable) (2023-11-11 r85510) -- "Unsuffered Consequences"	4369
kunpeng2	Linux (openEuler 22.03 LTS-SP1)	aarch64	R Under development (unstable) (2023-11-01 r85459) -- "Unsuffered Consequences"	4254
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

CopyNumberPlots 1.19.0 (landing page)
Bernat Gel

Snapshot Date: 2023-12-01 14:00:13 -0500 (Fri, 01 Dec 2023)

git_url: https://git.bioconductor.org/packages/CopyNumberPlots

git_branch: devel

git_last_commit: 5be9b08

git_last_commit_date: 2023-10-24 11:13:15 -0500 (Tue, 24 Oct 2023)

nebbiolo1

Linux (Ubuntu 22.04.2 LTS) / x86_64

ERROR

skipped

palomino3

Windows Server 2022 Datacenter / x64

ERROR

skipped

merida1

macOS 12.7.1 Monterey / x86_64

ERROR

skipped

kunpeng2

Linux (openEuler 22.03 LTS-SP1) / aarch64

ERROR

skipped

BUILD results for CopyNumberPlots on kunpeng2

To the developers/maintainers of the CopyNumberPlots package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/CopyNumberPlots.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.
- See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host.

raw results

Summary

Package: CopyNumberPlots

Version: 1.19.0

Command: /home/biocbuild/R/R-4.4-devel-2023.11.02/bin/R CMD build --keep-empty-dirs --no-resave-data CopyNumberPlots

StartedAt: 2023-12-01 22:15:37 -0000 (Fri, 01 Dec 2023)

EndedAt: 2023-12-01 22:15:38 -0000 (Fri, 01 Dec 2023)

EllapsedTime: 1.0 seconds

RetCode: 1

Status: ERROR

PackageFile: None

PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/R/R-4.4-devel-2023.11.02/bin/R CMD build --keep-empty-dirs --no-resave-data CopyNumberPlots
###
##############################################################################
##############################################################################


* checking for file ‘CopyNumberPlots/DESCRIPTION’ ... OK
* preparing ‘CopyNumberPlots’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
      -----------------------------------
ERROR: dependency ‘cn.mops’ is not available for package ‘CopyNumberPlots’
* removing ‘/home/biocbuild/tmp/RtmpF3QZVu/Rinst1c9c963c4ac16/CopyNumberPlots’
      -----------------------------------
ERROR: package installation failed