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This page was generated on 2023-06-09 11:07:13 -0400 (Fri, 09 Jun 2023).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.2 LTS)x86_644.3.0 RC (2023-04-13 r84269) -- "Already Tomorrow" 4628
palomino3Windows Server 2022 Datacenterx644.3.0 RC (2023-04-13 r84269 ucrt) -- "Already Tomorrow" 4379
merida1macOS 12.6.4 Montereyx86_644.3.0 RC (2023-04-13 r84257) -- "Already Tomorrow" 4385
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for REDseq on merida1


To the developers/maintainers of the REDseq package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/REDseq.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Package 1675/2229HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
REDseq 1.46.0  (landing page)
Lihua Julie Zhu
Snapshot Date: 2023-06-08 14:00:15 -0400 (Thu, 08 Jun 2023)
git_url: https://git.bioconductor.org/packages/REDseq
git_branch: RELEASE_3_17
git_last_commit: 4a4b132
git_last_commit_date: 2023-04-25 10:19:52 -0400 (Tue, 25 Apr 2023)
nebbiolo1Linux (Ubuntu 22.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.6.4 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: REDseq
Version: 1.46.0
Command: rm -rf REDseq.buildbin-libdir && mkdir REDseq.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh REDseq_1.46.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R REDseq.buildbin-libdir
StartedAt: 2023-06-09 10:07:03 -0400 (Fri, 09 Jun 2023)
EndedAt: 2023-06-09 10:09:21 -0400 (Fri, 09 Jun 2023)
EllapsedTime: 137.4 seconds
RetCode: 0
Status:   OK  
PackageFile: REDseq_1.46.0.tgz
PackageFileSize: 416.3 KiB

Command output

##############################################################################
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###
### Running command:
###
###   rm -rf REDseq.buildbin-libdir && mkdir REDseq.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh REDseq_1.46.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R REDseq.buildbin-libdir
###
##############################################################################
##############################################################################


>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=REDseq.buildbin-libdir REDseq_1.46.0.tar.gz'
>>>>>>> 

* installing *source* package ‘REDseq’ ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
No methods found in package ‘IRanges’ for requests: ‘%in%’, ‘rep.int’ when loading ‘REDseq’
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
No methods found in package ‘IRanges’ for requests: ‘%in%’, ‘rep.int’ when loading ‘REDseq’
** testing if installed package can be loaded from final location
No methods found in package ‘IRanges’ for requests: ‘%in%’, ‘rep.int’ when loading ‘REDseq’
** testing if installed package keeps a record of temporary installation path
* DONE (REDseq)