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This page was generated on 2022-03-18 11:07:35 -0400 (Fri, 18 Mar 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" 4334
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4097
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" 4083
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" 4134
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for genefu on riesling1


To the developers/maintainers of the genefu package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/genefu.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 725/2090HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
genefu 2.27.0  (landing page)
Benjamin Haibe-Kains
Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022)
git_url: https://git.bioconductor.org/packages/genefu
git_branch: master
git_last_commit: a614a0d
git_last_commit_date: 2021-10-26 11:58:39 -0400 (Tue, 26 Oct 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: genefu
Version: 2.27.0
Command: rm -rf genefu.buildbin-libdir && mkdir genefu.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=genefu.buildbin-libdir genefu_2.27.0.tar.gz
StartedAt: 2022-03-17 21:10:18 -0400 (Thu, 17 Mar 2022)
EndedAt: 2022-03-17 21:11:44 -0400 (Thu, 17 Mar 2022)
EllapsedTime: 85.8 seconds
RetCode: 0
Status:   OK  
PackageFile: genefu_2.27.0.zip
PackageFileSize: 5.063 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf genefu.buildbin-libdir && mkdir genefu.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=genefu.buildbin-libdir genefu_2.27.0.tar.gz
###
##############################################################################
##############################################################################


* installing *source* package 'genefu' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'genefu'
    finding HTML links ... done
    bimod                                   html  
    boxplotplus2                            html  
    claudinLow                              html  
    claudinLowData                          html  
    collapseIDs                             html  
    compareProtoCor                         html  
    compute.pairw.cor.meta                  html  
    compute.pairw.cor.z                     html  
    compute.proto.cor.meta                  html  
    cordiff.dep                             html  
    endoPredict                             html  
    expos                                   html  
    fuzzy.ttest                             html  
    gene70                                  html  
    gene76                                  html  
    geneid.map                              html  
    genius                                  html  
    ggi                                     html  
    ihc4                                    html  
    intrinsic.cluster                       html  
    intrinsic.cluster.predict               html  
    map.datasets                            html  
    medianCtr                               html  
    mod1                                    html  
    mod2                                    html  
    modelOvcAngiogenic                      html  
    molecular.subtyping                     html  
    nkis                                    html  
    npi                                     html  
    oncotypedx                              html  
    ovcAngiogenic                           html  
    ovcCrijns                               html  
    ovcTCGA                                 html  
    ovcYoshihara                            html  
    overlapSets                             html  
    pam50                                   html  
    pik3cags                                html  
    power.cor                               html  
    ps.cluster                              html  
    read.m.file                             html  
    readArray                               html  
    rename.duplicate                        html  
    rescale                                 html  
    rorS                                    html  
    scmgene.robust                          html  
    scmod1.robust                           html  
    scmod2.robust                           html  
    setcolclass.df                          html  
    sig.endoPredict                         html  
    sig.gene70                              html  
    sig.gene76                              html  
    sig.genius                              html  
    sig.ggi                                 html  
    sig.oncotypedx                          html  
    sig.pik3cags                            html  
    sig.score                               html  
    sig.tamr13                              html  
    sigOvcAngiogenic                        html  
    sigOvcCrijns                            html  
    sigOvcSpentzos                          html  
    sigOvcTCGA                              html  
    sigOvcYoshihara                         html  
    spearmanCI                              html  
    ssp2003                                 html  
    ssp2006                                 html  
    st.gallen                               html  
    stab.fs                                 html  
    stab.fs.ranking                         html  
    strescR                                 html  
    subtype.cluster                         html  
    subtype.cluster.predict                 html  
    tamr13                                  html  
    tbrm                                    html  
    vdxs                                    html  
    weighted.meanvar                        html  
    write.m.file                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'genefu' as genefu_2.27.0.zip
* DONE (genefu)