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CHECK report for JctSeqData on malbec2

This page was generated on 2021-01-11 15:59:23 -0500 (Mon, 11 Jan 2021).

TO THE DEVELOPERS/MAINTAINERS OF THE JctSeqData PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 190/385HostnameOS / ArchINSTALLBUILDCHECK
JctSeqData 1.21.1
Stephen Hartley
Snapshot Date: 2021-01-11 09:00:09 -0500 (Mon, 11 Jan 2021)
URL: https://git.bioconductor.org/packages/JctSeqData
Branch: master
Last Commit: 50b6ba0
Last Changed Date: 2020-11-30 08:25:59 -0500 (Mon, 30 Nov 2020)
malbec2 Linux (Ubuntu 20.04.1 LTS) / x86_64  OK  OK [ ERROR ]
riesling1 Windows Server 2019 Standard / x64  OK  OK  ERROR 

Summary

Package: JctSeqData
Version: 1.21.1
Command: /home/biocbuild/bbs-3.13-bioc/R/bin/R CMD check --install=check:JctSeqData.install-out.txt --library=/home/biocbuild/bbs-3.13-bioc/R/library --no-vignettes --timings JctSeqData_1.21.1.tar.gz
StartedAt: 2021-01-11 12:15:47 -0500 (Mon, 11 Jan 2021)
EndedAt: 2021-01-11 12:15:53 -0500 (Mon, 11 Jan 2021)
EllapsedTime: 6.0 seconds
RetCode: 1
Status:  ERROR 
CheckDir: JctSeqData.Rcheck
Warnings: NA

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.13-bioc/R/bin/R CMD check --install=check:JctSeqData.install-out.txt --library=/home/biocbuild/bbs-3.13-bioc/R/library --no-vignettes --timings JctSeqData_1.21.1.tar.gz
###
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* using log directory ‘/home/biocbuild/bbs-3.13-data-experiment/meat/JctSeqData.Rcheck’
* using R Under development (unstable) (2021-01-05 r79797)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘JctSeqData/DESCRIPTION’ ... OK
* this is package ‘JctSeqData’ version ‘1.21.1’
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package suggested but not available: ‘JunctionSeq’

The suggested packages are required for a complete check.
Checking can be attempted without them by setting the environment
variable _R_CHECK_FORCE_SUGGESTS_ to a false value.

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE

Status: 1 ERROR
See
  ‘/home/biocbuild/bbs-3.13-data-experiment/meat/JctSeqData.Rcheck/00check.log’
for details.


Installation output


Tests output


Example timings