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INSTALL report for ALDEx2 on tokay1

This page was generated on 2020-08-06 11:58:21 -0400 (Thu, 06 Aug 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE ALDEx2 PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 40/1882HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ALDEx2 1.21.1
Greg Gloor
Snapshot Date: 2020-08-05 14:50:59 -0400 (Wed, 05 Aug 2020)
URL: https://git.bioconductor.org/packages/ALDEx2
Branch: master
Last Commit: 93c54f9
Last Changed Date: 2020-07-07 15:59:33 -0400 (Tue, 07 Jul 2020)
malbec1 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida1 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: ALDEx2
Version: 1.21.1
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.12/bioc/src/contrib/ALDEx2_1.21.1.tar.gz && rm -rf ALDEx2.buildbin-libdir && mkdir ALDEx2.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ALDEx2.buildbin-libdir ALDEx2_1.21.1.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL ALDEx2_1.21.1.zip && rm ALDEx2_1.21.1.tar.gz ALDEx2_1.21.1.zip
StartedAt: 2020-08-05 18:01:26 -0400 (Wed, 05 Aug 2020)
EndedAt: 2020-08-05 18:02:09 -0400 (Wed, 05 Aug 2020)
EllapsedTime: 43.0 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.12/bioc/src/contrib/ALDEx2_1.21.1.tar.gz && rm -rf ALDEx2.buildbin-libdir && mkdir ALDEx2.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ALDEx2.buildbin-libdir ALDEx2_1.21.1.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL ALDEx2_1.21.1.zip && rm ALDEx2_1.21.1.tar.gz ALDEx2_1.21.1.zip
###
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install for i386

* installing *source* package 'ALDEx2' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'ALDEx2'
    finding HTML links ... done
    ALDEx2m-package                         html  
    aldex                                   html  
    aldex.clr-class                         html  
    aldex.clr.function-methods              html  
    aldex.corr                              html  
    aldex.effect                            html  
    aldex.glm                               html  
    aldex.glm.effect                        html  
    aldex.kw                                html  
    aldex.plotFeature                       html  
    aldex.set.mode                          html  
    aldex.ttest                             html  
    expectedDistance                        html  
    getDenom-method                         html  
    getFeatureNames-method                  html  
    getFeatures-method                      html  
    getMonteCarloInstances-method           html  
    getMonteCarloReplicate-method           html  
    getMonteCarloSample-method              html  
    getReads-method                         html  
    getSampleIDs-method                     html  
    numConditions-method                    html  
    numFeatures-method                      html  
    numMCInstances-method                   html  
    plot.aldex                              html  
    selex                                   html  
    synth2                                  html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'ALDEx2' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ALDEx2' as ALDEx2_1.21.1.zip
* DONE (ALDEx2)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'ALDEx2' successfully unpacked and MD5 sums checked