multiWGCNAdata

DOI: 10.18129/B9.bioc.multiWGCNAdata  

This is the development version of multiWGCNAdata; for the stable release version, see multiWGCNAdata.

Data Package for multiWGCNA

Bioconductor version: Development (3.19)

Stores expression profiling data from experiments compatible with the multiWGCNA R package. This includes human postmortem microarray data from patients and controls (GSE28521), astrocyte Ribotag RNA-seq data from EAE and wildtype mice (GSE100329), and mouse RNA-seq data from tau pathology (rTg4510) and wildtype control mice (GSE125957). These data can be accessed using the ExperimentHub workflow (see multiWGCNA vignettes).

Author: Dario Tommasini [aut, cre]

Maintainer: Dario Tommasini <dtommasini0 at gmail.com>

Citation (from within R, enter citation("multiWGCNAdata")):

Installation

To install this package, start R (version "4.4") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("multiWGCNAdata")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("multiWGCNAdata")

 

HTML R Script Loading data through ExperimentHub
PDF   Reference Manual
Text   NEWS

Details

biocViews ExperimentData, ExperimentHub, ExpressionData, Homo_sapiens_Data, MicroarrayData, Mus_musculus_Data, RNASeqData
Version 1.1.2
License Artistic-2.0
Depends ExperimentHub
Imports utils
LinkingTo
Suggests BiocStyle, knitr, multiWGCNA, rmarkdown, SummarizedExperiment
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package multiWGCNAdata_1.1.2.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/multiWGCNAdata
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/multiWGCNAdata
Package Short Url https://bioconductor.org/packages/multiWGCNAdata/
Package Downloads Report Download Stats

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