multiWGCNAdata

DOI: 10.18129/B9.bioc.multiWGCNAdata  

This is the development version of multiWGCNAdata; for the stable release version, see multiWGCNAdata.

Data Package for multiWGCNA

Bioconductor version: Development (3.19)

Stores expression profiling data from experiments compatible with the multiWGCNA R package. This includes human postmortem microarray data from patients and controls (GSE28521), astrocyte Ribotag RNA-seq data from EAE and wildtype mice (GSE100329), and mouse RNA-seq data from tau pathology (rTg4510) and wildtype control mice (GSE125957). These data can be accessed using the ExperimentHub workflow (see multiWGCNA vignettes).

Author: Dario Tommasini [aut, cre]

Maintainer: Dario Tommasini <dtommasini0 at gmail.com>

Installation

To install this package, start R (version "4.4") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("multiWGCNAdata")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("multiWGCNAdata")

 

HTML	R Script	Loading data through ExperimentHub
PDF		Reference Manual
Text		NEWS

Details

biocViews	ExperimentData, ExperimentHub, ExpressionData, Homo_sapiens_Data, MicroarrayData, Mus_musculus_Data, RNASeqData
Version	1.1.2
License	Artistic-2.0
Depends	ExperimentHub
Imports	utils
LinkingTo
Suggests	BiocStyle, knitr, multiWGCNA, rmarkdown, SummarizedExperiment
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	multiWGCNAdata_1.1.2.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository	git clone https://git.bioconductor.org/packages/multiWGCNAdata
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/multiWGCNAdata
Package Short Url	https://bioconductor.org/packages/multiWGCNAdata/
Package Downloads Report	Download Stats