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This is the development version of annaffy; for the stable release version, see annaffy.
Bioconductor version: Development (3.18)
Functions for handling data from Bioconductor Affymetrix annotation data packages. Produces compact HTML and text reports including experimental data and URL links to many online databases. Allows searching biological metadata using various criteria.
Author: Colin A. Smith <colin at colinsmith.org>
Maintainer: Colin A. Smith <colin at colinsmith.org>
Citation (from within R,
enter citation("annaffy")
):
To install this package, start R (version "4.3") and enter:
if (!require("BiocManager", quietly = TRUE)) install.packages("BiocManager") # The following initializes usage of Bioc devel BiocManager::install(version='devel') BiocManager::install("annaffy")
For older versions of R, please refer to the appropriate Bioconductor release.
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("annaffy")
R Script | annaffy Primer | |
Reference Manual |
biocViews | Annotation, GO, Microarray, OneChannel, Pathways, ReportWriting, Software |
Version | 1.73.0 |
In Bioconductor since | BioC 1.6 (R-2.1) or earlier (> 18 years) |
License | LGPL |
Depends | R (>= 2.5.0), methods, Biobase, BiocManager, GO.db |
Imports | AnnotationDbi(>= 0.1.15), DBI |
LinkingTo | |
Suggests | hgu95av2.db, multtest, tcltk |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | webbioc |
Imports Me | a4Base |
Suggests Me | metaMA |
Links To Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | annaffy_1.73.0.tar.gz |
Windows Binary | annaffy_1.73.0.zip (64-bit only) |
macOS Binary (x86_64) | annaffy_1.73.0.tgz |
macOS Binary (arm64) | |
Source Repository | git clone https://git.bioconductor.org/packages/annaffy |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/annaffy |
Bioc Package Browser | https://code.bioconductor.org/browse/annaffy/ |
Package Short Url | https://bioconductor.org/packages/annaffy/ |
Package Downloads Report | Download Stats |
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