org.Hs.eg.db
|
Genome wide annotation for Human
Bioconductor version: Release (3.4)
Genome wide annotation for Human, primarily based on mapping using Entrez Gene identifiers.
Author: Marc Carlson
Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>
Citation (from within R,
enter citation("org.Hs.eg.db")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("org.Hs.eg.db")
Documentation
Details
| biocViews |
AnnotationData, Homo_sapiens, OrgDb, humanLLMappings |
| Version |
3.4.0 |
| License |
Artistic-2.0 |
| Depends |
R (>= 2.7.0), methods, AnnotationDbi(>= 1.35.4) |
| Imports |
methods, AnnotationDbi |
| LinkingTo |
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| Suggests |
DBI, annotate, RUnit |
| SystemRequirements |
|
| Enhances |
|
| URL |
|
| Depends On Me |
clariomdhumanprobeset.db, clariomdhumantranscriptcluster.db, clariomshumanhttranscriptcluster.db, clariomshumantranscriptcluster.db, CoCiteStats, FDb.InfiniumMethylation.hg18, FDb.InfiniumMethylation.hg19, FEM, GGHumanMethCancerPanelv1.db, h10kcod.db, h20kcod.db, hcg110.db, hgfocus.db, hgu133a.db, hgu133a2.db, hgu133b.db, hgu133plus2.db, hgu219.db, hgu95a.db, hgu95av2.db, hgu95b.db, hgu95c.db, hgu95d.db, hgu95e.db, hguatlas13k.db, hgubeta7.db, hguDKFZ31.db, hgug4100a.db, hgug4101a.db, hgug4110b.db, hgug4111a.db, hgug4112a.db, hgug4845a.db, hguqiagenv3.db, hi16cod.db, Homo.sapiens, hs25kresogen.db, Hs6UG171.db, HsAgilentDesign026652.db, hta20probeset.db, hta20transcriptcluster.db, hthgu133a.db, hthgu133b.db, hu35ksuba.db, hu35ksubb.db, hu35ksubc.db, hu35ksubd.db, hu6800.db, huex10stprobeset.db, huex10sttranscriptcluster.db, hugene10stprobeset.db, hugene10sttranscriptcluster.db, hugene11stprobeset.db, hugene11sttranscriptcluster.db, hugene20stprobeset.db, hugene20sttranscriptcluster.db, hugene21stprobeset.db, hugene21sttranscriptcluster.db, HuO22.db, hwgcod.db, IlluminaHumanMethylation27k.db, IlluminaHumanMethylation450k.db, illuminaHumanv1.db, illuminaHumanv2.db, illuminaHumanv2BeadID.db, illuminaHumanv3.db, illuminaHumanv4.db, illuminaHumanWGDASLv3.db, illuminaHumanWGDASLv4.db, JazaeriMetaData.db, KEGGlincs, LAPOINTE.db, lumiHumanAll.db, meshr, methyAnalysis, Mulder2012, Norway981.db, nugohs1a520180.db, OperonHumanV3.db, PartheenMetaData.db, pathview, pedbarrayv10.db, pedbarrayv9.db, POCRCannotation.db, Roberts2005Annotation.db, SHDZ.db, tRanslatome, u133x3p.db |
| Imports Me |
annotatr, attract, bioCancer, cellity, debrowser, dSimer, eegc, EGSEA, geneAttribution, GEOsearch, GOpro, GOSim, LINC, MetaboSignal, mirIntegrator, missMethyl, NanoStringQCPro, RCAS, rCGH, rgsepd, rTRMui, SEPA, SMITE, SpidermiR, StarBioTrek |
| Suggests Me |
AllelicImbalance, annotate, AnnotationDbi, AnnotationForge, AnnotationFuncs, BiocCaseStudies, bumphunter, categoryCompare, cellTree, cgdv17, ChIPpeakAnno, ChIPseeker, CINdex, clusterProfiler, cnvGSA, CRISPRseek, crossmeta, DEGreport, derfinderPlot, DOSE, eisa, FunciSNP, gage, gCMAPWeb, gCrisprTools, GeneAnswers, GenomicFeatures, GenomicRanges, globaltest, gmapR, GoogleGenomics, goProfiles, GOSemSim, goseq, GOstats, graphite, groHMM, GSAR, GSEABase, GUIDEseq, hpar, HTSanalyzeR, HTSeqGenie, InPAS, KEGGgraph, limma, miRLAB, miRNAtap, MLP, mvGST, oneChannelGUI, oppar, pcaExplorer, PGSEA, Pigengene, prostateCancerTaylor, PSICQUIC, QuaternaryProd, R3CPET, ReactomePA, recount, RefNet, RforProteomics, RmiR, RnBeads, RpsiXML, RTopper, rtracklayer, rTRM, scde, SigFuge, ToPASeq, trackViewer, VariantFiltering |
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