To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("VariantFiltering")
In most cases, you don't need to download the package archive at all.
Bioconductor version: Release (3.4)
Filter genetic variants using different criteria such as inheritance model, amino acid change consequence, minor allele frequencies across human populations, splice site strength, conservation, etc.
Author: Robert Castelo [aut, cre], Dei Martinez Elurbe [ctb], Pau Puigdevall [ctb]
Maintainer: Robert Castelo <robert.castelo at upf.edu>
Citation (from within R,
enter citation("VariantFiltering")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("VariantFiltering")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("VariantFiltering")
R Script | VariantFiltering: filter coding and non-coding genetic variants | |
Reference Manual | ||
Text | NEWS |
Follow Installation instructions to use this package in your R session.
Package Source | VariantFiltering_1.10.1.tar.gz |
Windows Binary | VariantFiltering_1.10.1.zip (32- & 64-bit) |
Mac OS X 10.9 (Mavericks) | VariantFiltering_1.10.1.tgz |
Subversion source | (username/password: readonly) |
Git source | https://github.com/Bioconductor-mirror/VariantFiltering/tree/release-3.4 |
Package Short Url | http://bioconductor.org/packages/VariantFiltering/ |
Package Downloads Report | Download Stats |
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