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This page was generated on 2024-05-07 11:32:35 -0400 (Tue, 07 May 2024).

HostnameOSArch (*)R versionInstalled pkgs
kjohnson3macOS 13.6.5 Venturaarm644.4.0 (2024-04-24) -- "Puppy Cup" 4461
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 963/2300HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
HiCcompare 1.26.0  (landing page)
Mikhail Dozmorov
Snapshot Date: 2024-05-06 14:00:02 -0400 (Mon, 06 May 2024)
git_url: https://git.bioconductor.org/packages/HiCcompare
git_branch: RELEASE_3_19
git_last_commit: bdcadd4
git_last_commit_date: 2024-04-30 10:59:23 -0400 (Tue, 30 Apr 2024)
kjohnson3macOS 13.6.5 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published

BUILD results for HiCcompare on kjohnson3


To the developers/maintainers of the HiCcompare package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: HiCcompare
Version: 1.26.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data HiCcompare
StartedAt: 2024-05-06 17:34:21 -0400 (Mon, 06 May 2024)
EndedAt: 2024-05-06 17:34:45 -0400 (Mon, 06 May 2024)
EllapsedTime: 23.2 seconds
RetCode: 0
Status:   OK  
PackageFile: HiCcompare_1.26.0.tar.gz
PackageFileSize: 3.662 MiB

Command output

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### Running command:
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###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data HiCcompare
###
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* checking for file ‘HiCcompare/DESCRIPTION’ ... OK
* preparing ‘HiCcompare’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
* excluding invalid files
Subdirectory 'R' contains invalid file names:
  ‘get_CNV.txt’
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
  NB: this package now depends on R (>= 3.5.0)
  WARNING: Added dependency on R >= 3.5.0 because serialized objects in
  serialize/load version 3 cannot be read in older versions of R.
  File(s) containing such objects:
    ‘HiCcompare/data/hmec.IS.rda’ ‘HiCcompare/data/nhek.IS.rda’
* building ‘HiCcompare_1.26.0.tar.gz’