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This page was generated on 2024-06-18 17:59 -0400 (Tue, 18 Jun 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.3 LTS)x86_644.4.0 (2024-04-24) -- "Puppy Cup" 4758
palomino3Windows Server 2022 Datacenterx644.4.0 (2024-04-24 ucrt) -- "Puppy Cup" 4492
merida1macOS 12.7.4 Montereyx86_644.4.0 (2024-04-24) -- "Puppy Cup" 4464
kjohnson1macOS 13.6.6 Venturaarm644.4.0 (2024-04-24) -- "Puppy Cup" 4464
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 2018/2300HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
soGGi 1.36.0  (landing page)
Tom Carroll
Snapshot Date: 2024-06-16 14:00 -0400 (Sun, 16 Jun 2024)
git_url: https://git.bioconductor.org/packages/soGGi
git_branch: RELEASE_3_19
git_last_commit: 6be3c53
git_last_commit_date: 2024-04-30 10:43:18 -0400 (Tue, 30 Apr 2024)
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.7.4 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.6 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published


BUILD results for soGGi on palomino3

To the developers/maintainers of the soGGi package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/soGGi.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: soGGi
Version: 1.36.0
Command: chmod a+r soGGi -R && F:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data soGGi
StartedAt: 2024-06-16 23:04:40 -0400 (Sun, 16 Jun 2024)
EndedAt: 2024-06-16 23:07:04 -0400 (Sun, 16 Jun 2024)
EllapsedTime: 143.2 seconds
RetCode: 0
Status:   OK  
PackageFile: soGGi_1.36.0.tar.gz
PackageFileSize: 3.053 MiB

Command output

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###
### Running command:
###
###   chmod a+r soGGi -R && F:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data soGGi
###
##############################################################################
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* checking for file 'soGGi/DESCRIPTION' ... OK
* preparing 'soGGi':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
Warning: 'inst/doc' files
    'soggi.Rnw', 'soggi.pdf'
  ignored as vignettes have been rebuilt.
  Run R CMD build with --no-build-vignettes to prevent rebuilding.
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
* looking to see if a 'data/datalist' file should be added
  NB: this package now depends on R (>= 3.5.0)
  WARNING: Added dependency on R >= 3.5.0 because serialized objects in
  serialize/load version 3 cannot be read in older versions of R.
  File(s) containing such objects:
    'soGGi/data/chipExampleBig.rda' 'soGGi/data/ik_Example.rda'
    'soGGi/data/ik_Profiles.rda' 'soGGi/data/singleGRange.rda'
* building 'soGGi_1.36.0.tar.gz'