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This page was generated on 2023-03-20 11:06:12 -0400 (Mon, 20 Mar 2023).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.5 LTS)x86_644.2.2 (2022-10-31) -- "Innocent and Trusting" 4516
palomino4Windows Server 2022 Datacenterx644.2.2 (2022-10-31 ucrt) -- "Innocent and Trusting" 4295
lconwaymacOS 12.5.1 Montereyx86_644.2.2 (2022-10-31) -- "Innocent and Trusting" 4324
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for muscat on lconway


To the developers/maintainers of the muscat package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/muscat.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1310/2183HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
muscat 1.12.1  (landing page)
Helena L. Crowell
Snapshot Date: 2023-03-17 14:00:04 -0400 (Fri, 17 Mar 2023)
git_url: https://git.bioconductor.org/packages/muscat
git_branch: RELEASE_3_16
git_last_commit: ae0feb7
git_last_commit_date: 2023-02-08 11:43:59 -0400 (Wed, 08 Feb 2023)
nebbiolo2Linux (Ubuntu 20.04.5 LTS) / x86_64  OK    OK    ERROR  
palomino4Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.5.1 Monterey / x86_64  OK    ERROR  skippedskipped

Summary

Package: muscat
Version: 1.12.1
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data muscat
StartedAt: 2023-03-17 17:22:02 -0400 (Fri, 17 Mar 2023)
EndedAt: 2023-03-17 17:24:43 -0400 (Fri, 17 Mar 2023)
EllapsedTime: 161.3 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
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### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data muscat
###
##############################################################################
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* checking for file ‘muscat/DESCRIPTION’ ... OK
* preparing ‘muscat’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘analysis.Rmd’ using rmarkdown
Quitting from lines 119-122 (analysis.Rmd) 
Error: processing vignette 'analysis.Rmd' failed with diagnostics:
error in evaluating the argument 'x' in selecting a method for function 'rowSums': unable to find an inherited method for function 'counts' for signature '"tbl_df"'
--- failed re-building ‘analysis.Rmd’

--- re-building ‘simulation.Rmd’ using rmarkdown
--- finished re-building ‘simulation.Rmd’

SUMMARY: processing the following file failed:
  ‘analysis.Rmd’

Error: Vignette re-building failed.
Execution halted