Britta Velten
| Snapshot Date: 2024-03-01 14:00:22 -0500 (Fri, 01 Mar 2024) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: devel |
| git_last_commit: bf73019 |
| git_last_commit_date: 2023-10-24 11:10:07 -0500 (Tue, 24 Oct 2023) |
| Back to Multiple platform build/check report for BioC 3.19: simplified long |
|
This page was generated on 2024-03-04 11:39:18 -0500 (Mon, 04 Mar 2024).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | R Under development (unstable) (2024-01-16 r85808) -- "Unsuffered Consequences" | 4676 |
| palomino3 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2024-01-14 r85805 ucrt) -- "Unsuffered Consequences" | 4414 |
| merida1 | macOS 12.7.1 Monterey | x86_64 | R Under development (unstable) (2024-01-16 r85808) -- "Unsuffered Consequences" | 4441 |
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) | aarch64 | R Under development (unstable) (2024-01-16 r85812) -- "Unsuffered Consequences" | 4417 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 891/2251 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.19.0 (landing page) Britta Velten
| nebbiolo1 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| palomino3 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 12.7.1 Monterey / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) / aarch64 | OK | OK | OK | ||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.19.0 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.19.0.tar.gz |
| StartedAt: 2024-03-02 04:54:49 -0500 (Sat, 02 Mar 2024) |
| EndedAt: 2024-03-02 04:56:55 -0500 (Sat, 02 Mar 2024) |
| EllapsedTime: 126.3 seconds |
| RetCode: 0 |
| Status: WARNINGS |
| CheckDir: graper.Rcheck |
| Warnings: 1 |
##############################################################################
##############################################################################
###
### Running command:
###
### /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.19.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/Users/biocbuild/bbs-3.19-bioc/meat/graper.Rcheck’
* using R Under development (unstable) (2024-01-16 r85808)
* using platform: x86_64-apple-darwin20
* R was compiled by
Apple clang version 14.0.0 (clang-1400.0.29.202)
GNU Fortran (GCC) 12.2.0
* running under: macOS Monterey 12.7.1
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.19.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... WARNING
Found the following significant warnings:
/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/BH/include/boost/math/tools/config.hpp:23:6: warning: "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-W#warnings]
# warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)"
See ‘/Users/biocbuild/bbs-3.19-bioc/meat/graper.Rcheck/00install.out’ for details.
* used C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
* used SDK: ‘MacOSX11.3.sdk’
* checking C++ specification ... NOTE
Specified C++11: please drop specification unless essential
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 1 WARNING, 2 NOTEs
See
‘/Users/biocbuild/bbs-3.19-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
##############################################################################
##############################################################################
###
### Running command:
###
### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL graper
###
##############################################################################
##############################################################################
* installing to library ‘/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library’
* installing *source* package ‘graper’ ...
** using staged installation
** libs
using C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
using C++11
using SDK: ‘MacOSX11.3.sdk’
clang++ -arch x86_64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/BH/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
clang++ -arch x86_64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/BH/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c fit_graper.cpp -o fit_graper.o
In file included from fit_graper.cpp:4:
In file included from ./graper_linear_dense_ff.h:2:
In file included from /Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/BH/include/boost/math/special_functions/digamma.hpp:15:
In file included from /Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/BH/include/boost/math/special_functions/math_fwd.hpp:29:
In file included from /Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/BH/include/boost/math/special_functions/detail/round_fwd.hpp:11:
/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/BH/include/boost/math/tools/config.hpp:23:6: warning: "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-W#warnings]
# warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)"
^
1 warning generated.
clang++ -arch x86_64 -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o graper.so RcppExports.o fit_graper.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/x86_64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)
graper.Rcheck/tests/testthat.Rout
R Under development (unstable) (2024-01-16 r85808) -- "Unsuffered Consequences"
Copyright (C) 2024 The R Foundation for Statistical Computing
Platform: x86_64-apple-darwin20
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-861.663
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-573.61
ELB improved by 288.053
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-515.492
ELB improved by 58.1173
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-483.92
ELB improved by 31.5726
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-470.378
ELB improved by 13.5417
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.173
ELB improved by 6.20552
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.31
ELB improved by 3.86278
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.233
ELB improved by 3.07706
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.388
ELB improved by 2.84494
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.538
ELB improved by 2.84951
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.608
ELB improved by 2.93026
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.645
ELB improved by 2.96293
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.806
ELB improved by 2.8396
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.28
ELB improved by 2.52592
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.185
ELB improved by 2.09441
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.538
ELB improved by 1.64772
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.279
ELB improved by 1.25858
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.312
ELB improved by 0.966616
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.541
ELB improved by 0.77169
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.895
ELB improved by 0.645726
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.335
ELB improved by 0.559872
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.838
ELB improved by 0.497154
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.388
ELB improved by 0.449443
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.977
ELB improved by 0.411835
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.596
ELB improved by 0.380708
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.242
ELB improved by 0.353942
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.911
ELB improved by 0.331005
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.598
ELB improved by 0.312694
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.297
ELB improved by 0.301129
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.997
ELB improved by 0.300516
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.677
ELB improved by 0.319213
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.305
ELB improved by 0.372131
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.832
ELB improved by 0.473332
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.226
ELB improved by 0.605688
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.495
ELB improved by 0.730853
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.665
ELB improved by 0.830468
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.786
ELB improved by 0.878471
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.877
ELB improved by 0.909812
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.895
ELB improved by 0.981876
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.774
ELB improved by 1.12101
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.457
ELB improved by 1.31688
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.964
ELB improved by 1.49238
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.375
ELB improved by 1.58914
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.783
ELB improved by 1.59243
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.316
ELB improved by 1.46687
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.096
ELB improved by 1.21991
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.177
ELB improved by 0.919323
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.537
ELB improved by 0.640276
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.112
ELB improved by 0.42459
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.835
ELB improved by 0.277316
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.65
ELB improved by 0.184146
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.523
ELB improved by 0.12729
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.431
ELB improved by 0.0926336
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.36
ELB improved by 0.0709159
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.303
ELB improved by 0.0566404
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.256
ELB improved by 0.0467089
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.217
ELB improved by 0.0394077
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.183
ELB improved by 0.0337839
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.154
ELB improved by 0.0292944
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.128
ELB improved by 0.025617
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.106
ELB improved by 0.0225504
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.086
ELB improved by 0.0199613
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.068
ELB improved by 0.0177563
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.052
ELB improved by 0.0158665
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.038
ELB improved by 0.0142392
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.025
ELB improved by 0.0128325
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.013
ELB improved by 0.0116126
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.003
ELB improved by 0.0105516
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.993
ELB improved by 0.00962634
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-881.145
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-576.264
ELB improved by 304.881
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-519.676
ELB improved by 56.5873
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-485.636
ELB improved by 34.0399
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-471.447
ELB improved by 14.1896
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.926
ELB improved by 6.52115
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.402
ELB improved by 4.52328
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.229
ELB improved by 4.17307
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.978
ELB improved by 4.25161
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.583
ELB improved by 4.39489
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.22
ELB improved by 4.3633
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.235
ELB improved by 3.98413
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.937
ELB improved by 3.2983
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.402
ELB improved by 2.53511
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.538
ELB improved by 1.86394
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.205
ELB improved by 1.33262
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.251
ELB improved by 0.954225
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.54
ELB improved by 0.710981
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.976
ELB improved by 0.563812
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.5
ELB improved by 0.476276
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.076
ELB improved by 0.423855
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.684
ELB improved by 0.392372
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.31
ELB improved by 0.374031
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.945
ELB improved by 0.36448
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.584
ELB improved by 0.361158
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.222
ELB improved by 0.362475
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.854
ELB improved by 0.367414
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.479
ELB improved by 0.375353
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.093
ELB improved by 0.385945
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.694
ELB improved by 0.399019
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.28
ELB improved by 0.414426
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.848
ELB improved by 0.431854
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.397
ELB improved by 0.450647
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.927
ELB improved by 0.469711
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.44
ELB improved by 0.487574
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.937
ELB improved by 0.502505
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.425
ELB improved by 0.512536
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.909
ELB improved by 0.515491
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.4
ELB improved by 0.509273
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.908
ELB improved by 0.492455
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.443
ELB improved by 0.464903
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.015
ELB improved by 0.428045
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.63
ELB improved by 0.384637
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.292
ELB improved by 0.338088
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417
ELB improved by 0.291671
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.752
ELB improved by 0.247937
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.544
ELB improved by 0.20849
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.37
ELB improved by 0.174083
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.225
ELB improved by 0.144837
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.104
ELB improved by 0.120477
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.004
ELB improved by 0.100498
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.92
ELB improved by 0.084292
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.848
ELB improved by 0.0712328
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.788
ELB improved by 0.0607317
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.735
ELB improved by 0.0522724
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.69
ELB improved by 0.0454236
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.65
ELB improved by 0.039837
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.615
ELB improved by 0.0352368
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.583
ELB improved by 0.0314066
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.555
ELB improved by 0.0281769
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.53
ELB improved by 0.0254144
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.507
ELB improved by 0.0230145
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.486
ELB improved by 0.0208952
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.467
ELB improved by 0.0189945
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.45
ELB improved by 0.0172676
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.434
ELB improved by 0.0156852
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.42
ELB improved by 0.0142308
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.407
ELB improved by 0.0128974
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.395
ELB improved by 0.0116837
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.385
ELB improved by 0.0105898
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.375
ELB improved by 0.0096146
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-872.104
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-575.098
ELB improved by 297.006
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-514.789
ELB improved by 60.3092
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-473.116
ELB improved by 41.6731
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.175
ELB improved by 19.9402
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.197
ELB improved by 7.97818
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.349
ELB improved by 3.84793
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.93
ELB improved by 2.41942
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.128
ELB improved by 1.80216
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.622
ELB improved by 1.50529
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.271
ELB improved by 1.35175
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.01
ELB improved by 1.26053
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.818
ELB improved by 1.19227
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.691
ELB improved by 1.12674
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.638
ELB improved by 1.05318
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.671
ELB improved by 0.966737
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.804
ELB improved by 0.867301
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.045
ELB improved by 0.758789
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.397
ELB improved by 0.64792
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.855
ELB improved by 0.542168
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.407
ELB improved by 0.447597
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.04
ELB improved by 0.367545
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.737
ELB improved by 0.302555
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.486
ELB improved by 0.251212
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.275
ELB improved by 0.211187
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.095
ELB improved by 0.180031
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.939
ELB improved by 0.155601
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.803
ELB improved by 0.13619
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.683
ELB improved by 0.120513
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.575
ELB improved by 0.107633
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.478
ELB improved by 0.0968686
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.39
ELB improved by 0.0877324
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.31
ELB improved by 0.0798694
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.237
ELB improved by 0.0730205
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.17
ELB improved by 0.0669934
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.109
ELB improved by 0.0616438
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.052
ELB improved by 0.0568614
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.999
ELB improved by 0.0525606
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.951
ELB improved by 0.0486737
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.906
ELB improved by 0.0451465
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.864
ELB improved by 0.0419349
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.825
ELB improved by 0.0390023
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.788
ELB improved by 0.0363181
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.754
ELB improved by 0.0338562
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.723
ELB improved by 0.0315941
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.693
ELB improved by 0.0295125
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.666
ELB improved by 0.0275943
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.64
ELB improved by 0.0258245
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.616
ELB improved by 0.0241897
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.593
ELB improved by 0.0226781
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.572
ELB improved by 0.021279
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.552
ELB improved by 0.0199829
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.533
ELB improved by 0.018781
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.515
ELB improved by 0.0176657
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.499
ELB improved by 0.0166298
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.483
ELB improved by 0.015667
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.468
ELB improved by 0.0147713
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.454
ELB improved by 0.0139375
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.441
ELB improved by 0.0131608
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.429
ELB improved by 0.0124368
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.417
ELB improved by 0.0117614
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.406
ELB improved by 0.0111309
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.395
ELB improved by 0.010542
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.385
ELB improved by 0.00999163
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-848.894
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-568.234
ELB improved by 280.659
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-507.19
ELB improved by 61.0443
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-469.582
ELB improved by 37.6087
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.189
ELB improved by 18.3927
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.035
ELB improved by 9.15385
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.978
ELB improved by 5.0569
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.253
ELB improved by 3.72476
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.971
ELB improved by 3.282
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.825
ELB improved by 3.14669
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.681
ELB improved by 3.14384
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.515
ELB improved by 3.16596
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.429
ELB improved by 3.08624
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.644
ELB improved by 2.78504
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.388
ELB improved by 2.25517
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.751
ELB improved by 1.63704
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.648
ELB improved by 1.10316
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.917
ELB improved by 0.731282
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.414
ELB improved by 0.503087
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.044
ELB improved by 0.370123
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.751
ELB improved by 0.29293
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.504
ELB improved by 0.247209
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.284
ELB improved by 0.219445
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.082
ELB improved by 0.202374
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.89
ELB improved by 0.192113
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.703
ELB improved by 0.186552
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.519
ELB improved by 0.18451
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.333
ELB improved by 0.185293
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.145
ELB improved by 0.188452
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.951
ELB improved by 0.193654
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.751
ELB improved by 0.200595
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.542
ELB improved by 0.208955
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.323
ELB improved by 0.218354
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.095
ELB improved by 0.228339
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.857
ELB improved by 0.238387
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.609
ELB improved by 0.247926
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.352
ELB improved by 0.256388
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.089
ELB improved by 0.263285
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.821
ELB improved by 0.268297
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.549
ELB improved by 0.271365
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.276
ELB improved by 0.272771
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.003
ELB improved by 0.273209
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.729
ELB improved by 0.273905
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.453
ELB improved by 0.276869
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.167
ELB improved by 0.285359
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.863
ELB improved by 0.304058
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.527
ELB improved by 0.336019
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.155
ELB improved by 0.371907
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.768
ELB improved by 0.387102
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.394
ELB improved by 0.374003
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.043
ELB improved by 0.351058
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.713
ELB improved by 0.33022
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.401
ELB improved by 0.311819
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.107
ELB improved by 0.293738
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.833
ELB improved by 0.274622
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.579
ELB improved by 0.254049
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.346
ELB improved by 0.232252
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.136
ELB improved by 0.209835
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.949
ELB improved by 0.187572
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.783
ELB improved by 0.166331
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.635
ELB improved by 0.147165
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.504
ELB improved by 0.13162
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.381
ELB improved by 0.122573
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.255
ELB improved by 0.126336
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.098
ELB improved by 0.156539
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.869
ELB improved by 0.229512
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.556
ELB improved by 0.312323
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.242
ELB improved by 0.314711
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.979
ELB improved by 0.262493
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.755
ELB improved by 0.224027
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.555
ELB improved by 0.199935
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.382
ELB improved by 0.173385
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.241
ELB improved by 0.140964
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.131
ELB improved by 0.109564
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.046
ELB improved by 0.0854848
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.975
ELB improved by 0.0714275
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.906
ELB improved by 0.0687014
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.825
ELB improved by 0.0807585
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.707
ELB improved by 0.118366
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.501
ELB improved by 0.205353
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.143
ELB improved by 0.358782
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.638
ELB improved by 0.504983
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.107
ELB improved by 0.530211
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.654
ELB improved by 0.452869
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.305
ELB improved by 0.349545
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.036
ELB improved by 0.268626
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.818
ELB improved by 0.218269
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.628
ELB improved by 0.190522
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.45
ELB improved by 0.177772
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.277
ELB improved by 0.172321
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.115
ELB improved by 0.162737
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.974
ELB improved by 0.140365
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.865
ELB improved by 0.108993
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.786
ELB improved by 0.07895
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.731
ELB improved by 0.0557434
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.691
ELB improved by 0.0393989
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.663
ELB improved by 0.0282166
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.642
ELB improved by 0.020597
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.627
ELB improved by 0.0153746
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.615
ELB improved by 0.0117549
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.606
ELB improved by 0.00920983
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
4.493 0.459 5.712
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.084 | 0.044 | 0.169 | |
| getPIPs | 0.077 | 0.040 | 0.147 | |
| graper | 0.153 | 0.054 | 0.261 | |
| makeExampleData | 0.018 | 0.002 | 0.022 | |
| makeExampleDataWithUnequalGroups | 0.021 | 0.002 | 0.028 | |
| plotELBO | 0.396 | 0.042 | 0.504 | |
| plotGroupPenalties | 1.667 | 0.054 | 1.939 | |
| plotPosterior | 1.124 | 0.050 | 1.342 | |
| predict.graper | 2.917 | 0.206 | 3.597 | |
| print.graper | 0.075 | 0.031 | 0.123 | |