Britta Velten
| Snapshot Date: 2024-05-17 14:00:11 -0400 (Fri, 17 May 2024) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: RELEASE_3_19 |
| git_last_commit: a4dfa52 |
| git_last_commit_date: 2024-04-30 11:11:42 -0400 (Tue, 30 Apr 2024) |
| Back to Multiple platform build/check report for BioC 3.19: simplified long |
|
This page was generated on 2024-05-18 11:36:03 -0400 (Sat, 18 May 2024).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.4.0 (2024-04-24) -- "Puppy Cup" | 4751 |
| palomino3 | Windows Server 2022 Datacenter | x64 | 4.4.0 (2024-04-24 ucrt) -- "Puppy Cup" | 4485 |
| lconway | macOS 12.7.1 Monterey | x86_64 | 4.4.0 (2024-04-24) -- "Puppy Cup" | 4515 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 908/2300 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.20.0 (landing page) Britta Velten
| nebbiolo1 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| palomino3 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | | ||||||||
| lconway | macOS 12.7.1 Monterey / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| kjohnson3 | macOS 13.6.5 Ventura / arm64 | see weekly results here | ||||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.20.0 |
| Command: /home/biocbuild/bbs-3.19-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.19-bioc/R/site-library --timings graper_1.20.0.tar.gz |
| StartedAt: 2024-05-17 23:13:57 -0400 (Fri, 17 May 2024) |
| EndedAt: 2024-05-17 23:15:19 -0400 (Fri, 17 May 2024) |
| EllapsedTime: 82.3 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.19-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.19-bioc/R/site-library --timings graper_1.20.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.19-bioc/meat/graper.Rcheck’
* using R version 4.4.0 (2024-04-24)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0
GNU Fortran (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0
* running under: Ubuntu 22.04.4 LTS
* using session charset: UTF-8
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.20.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0’
* checking C++ specification ... NOTE
Specified C++11: please drop specification unless essential
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 3 NOTEs
See
‘/home/biocbuild/bbs-3.19-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.19-bioc/R/bin/R CMD INSTALL graper
###
##############################################################################
##############################################################################
* installing to library ‘/home/biocbuild/bbs-3.19-bioc/R/site-library’
* installing *source* package ‘graper’ ...
** using staged installation
** libs
using C++ compiler: ‘g++ (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0’
using C++11
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.19-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.19-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.19-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.19-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.19-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.19-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.19-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.19-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -c fit_graper.cpp -o fit_graper.o
In file included from /home/biocbuild/bbs-3.19-bioc/R/site-library/BH/include/boost/math/special_functions/detail/round_fwd.hpp:11,
from /home/biocbuild/bbs-3.19-bioc/R/site-library/BH/include/boost/math/special_functions/math_fwd.hpp:29,
from /home/biocbuild/bbs-3.19-bioc/R/site-library/BH/include/boost/math/special_functions/digamma.hpp:15,
from graper_linear_dense_ff.h:2,
from fit_graper.cpp:4:
/home/biocbuild/bbs-3.19-bioc/R/site-library/BH/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp]
23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)"
| ^~~~~~~
g++ -std=gnu++11 -shared -L/home/biocbuild/bbs-3.19-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.19-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.19-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.19-bioc/R/site-library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.4.0 (2024-04-24) -- "Puppy Cup"
Copyright (C) 2024 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-836.85
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-559.719
ELB improved by 277.13
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-502.104
ELB improved by 57.6158
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.158
ELB improved by 37.9457
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.771
ELB improved by 16.3871
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.53
ELB improved by 6.24121
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.061
ELB improved by 3.46888
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.472
ELB improved by 2.58929
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.197
ELB improved by 2.27427
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.027
ELB improved by 2.17061
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.881
ELB improved by 2.14536
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.737
ELB improved by 2.1447
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.605
ELB improved by 2.13184
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.532
ELB improved by 2.07298
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.584
ELB improved by 1.94745
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.827
ELB improved by 1.75689
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.311
ELB improved by 1.51673
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.061
ELB improved by 1.24929
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.075
ELB improved by 0.986323
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.317
ELB improved by 0.7579
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.739
ELB improved by 0.578299
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.293
ELB improved by 0.446047
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.941
ELB improved by 0.351527
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.658
ELB improved by 0.283711
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.424
ELB improved by 0.233749
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.228
ELB improved by 0.195765
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.062
ELB improved by 0.166159
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.919
ELB improved by 0.142671
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.795
ELB improved by 0.12377
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.687
ELB improved by 0.108352
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.591
ELB improved by 0.0956045
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.507
ELB improved by 0.084926
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.431
ELB improved by 0.0758745
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.363
ELB improved by 0.0681224
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.301
ELB improved by 0.0614241
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.246
ELB improved by 0.0555926
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.195
ELB improved by 0.0504832
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.149
ELB improved by 0.0459813
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.107
ELB improved by 0.0419956
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.069
ELB improved by 0.0384517
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.033
ELB improved by 0.0352885
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.001
ELB improved by 0.0324553
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.971
ELB improved by 0.0299098
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.943
ELB improved by 0.0276161
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.918
ELB improved by 0.025544
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.894
ELB improved by 0.0236675
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.872
ELB improved by 0.0219643
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.852
ELB improved by 0.0204152
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.833
ELB improved by 0.0190035
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.815
ELB improved by 0.0177148
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.799
ELB improved by 0.0165362
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.783
ELB improved by 0.0154566
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.769
ELB improved by 0.0144663
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.755
ELB improved by 0.0135565
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.742
ELB improved by 0.0127197
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.73
ELB improved by 0.0119489
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.719
ELB improved by 0.0112381
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.709
ELB improved by 0.0105819
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.699
ELB improved by 0.00997539
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-886.705
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-570.875
ELB improved by 315.83
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-511.721
ELB improved by 59.1533
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-471.77
ELB improved by 39.9516
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.804
ELB improved by 17.9658
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.328
ELB improved by 7.47623
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.924
ELB improved by 4.40409
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.385
ELB improved by 3.53854
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.965
ELB improved by 3.42009
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.282
ELB improved by 3.68254
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.119
ELB improved by 4.16297
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.44
ELB improved by 4.67909
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.531
ELB improved by 4.90981
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.025
ELB improved by 4.50561
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.508
ELB improved by 3.5165
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.073
ELB improved by 2.43522
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.438
ELB improved by 1.63567
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.277
ELB improved by 1.16031
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.367
ELB improved by 0.910152
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.589
ELB improved by 0.778081
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.896
ELB improved by 0.693317
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.271
ELB improved by 0.624277
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.71
ELB improved by 0.561162
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.208
ELB improved by 0.502563
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.757
ELB improved by 0.450193
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.351
ELB improved by 0.406339
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.978
ELB improved by 0.372738
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.628
ELB improved by 0.350814
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.285
ELB improved by 0.343059
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.928
ELB improved by 0.356267
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.518
ELB improved by 0.410177
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.957
ELB improved by 0.560726
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.031
ELB improved by 0.926362
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.575
ELB improved by 1.45641
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.037
ELB improved by 1.53793
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.709
ELB improved by 1.32741
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.543
ELB improved by 1.16665
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.525
ELB improved by 1.01777
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.674
ELB improved by 0.850391
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388
ELB improved by 0.674167
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.488
ELB improved by 0.51205
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.109
ELB improved by 0.379202
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.831
ELB improved by 0.278212
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.626
ELB improved by 0.204506
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.475
ELB improved by 0.151687
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.361
ELB improved by 0.114008
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.274
ELB improved by 0.0870367
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.206
ELB improved by 0.0675796
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.153
ELB improved by 0.0534092
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.11
ELB improved by 0.042987
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.074
ELB improved by 0.035249
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.045
ELB improved by 0.029454
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.02
ELB improved by 0.0250802
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.998
ELB improved by 0.0217567
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.979
ELB improved by 0.0192171
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.962
ELB improved by 0.0172689
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.946
ELB improved by 0.0157713
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.931
ELB improved by 0.0146214
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.917
ELB improved by 0.0137433
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.904
ELB improved by 0.0130808
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.892
ELB improved by 0.0125926
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.88
ELB improved by 0.0122482
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.868
ELB improved by 0.0120249
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.856
ELB improved by 0.0119064
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.844
ELB improved by 0.0118808
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.832
ELB improved by 0.0119395
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.82
ELB improved by 0.0120763
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.807
ELB improved by 0.0122869
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.795
ELB improved by 0.0125681
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.782
ELB improved by 0.0129172
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.769
ELB improved by 0.0133321
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.755
ELB improved by 0.0138106
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.74
ELB improved by 0.0143506
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.725
ELB improved by 0.0149501
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.71
ELB improved by 0.0156075
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.694
ELB improved by 0.0163216
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.676
ELB improved by 0.0170926
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.659
ELB improved by 0.0179223
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.64
ELB improved by 0.0188147
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.62
ELB improved by 0.0197769
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.599
ELB improved by 0.0208202
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.577
ELB improved by 0.0219602
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.554
ELB improved by 0.0232186
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.529
ELB improved by 0.0246232
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.503
ELB improved by 0.0262092
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.475
ELB improved by 0.0280198
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.445
ELB improved by 0.0301067
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.412
ELB improved by 0.0325309
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.377
ELB improved by 0.0353624
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.338
ELB improved by 0.0386789
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.296
ELB improved by 0.0425602
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.249
ELB improved by 0.0470773
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.197
ELB improved by 0.0522726
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.138
ELB improved by 0.0581321
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.074
ELB improved by 0.0645551
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.002
ELB improved by 0.071339
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.924
ELB improved by 0.0782023
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.839
ELB improved by 0.0848538
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.748
ELB improved by 0.091087
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.651
ELB improved by 0.096849
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.549
ELB improved by 0.102248
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.442
ELB improved by 0.107511
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.329
ELB improved by 0.11294
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.21
ELB improved by 0.11889
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.084
ELB improved by 0.125777
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.95
ELB improved by 0.134104
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.806
ELB improved by 0.144419
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.649
ELB improved by 0.157059
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.477
ELB improved by 0.17142
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.292
ELB improved by 0.184801
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.1
ELB improved by 0.19237
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.909
ELB improved by 0.190519
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.729
ELB improved by 0.180644
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.562
ELB improved by 0.166941
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.41
ELB improved by 0.152022
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.273
ELB improved by 0.136636
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.152
ELB improved by 0.121098
iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.046
ELB improved by 0.105826
iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.955
ELB improved by 0.0912817
iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.877
ELB improved by 0.0778564
iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.811
ELB improved by 0.065805
iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.756
ELB improved by 0.0552377
iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.71
ELB improved by 0.0461434
iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.672
ELB improved by 0.0384281
iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.64
ELB improved by 0.0319509
iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.613
ELB improved by 0.0265534
iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.591
ELB improved by 0.0220781
iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.573
ELB improved by 0.0183794
iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.557
ELB improved by 0.0153282
iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.544
ELB improved by 0.0128135
iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.534
ELB improved by 0.0107413
iteration 132
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.525
ELB improved by 0.00903327
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-848.925
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-581.108
ELB improved by 267.817
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-522.802
ELB improved by 58.3064
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-480.882
ELB improved by 41.9192
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-459.29
ELB improved by 21.5923
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.448
ELB improved by 8.84176
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.242
ELB improved by 4.20639
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.422
ELB improved by 2.81957
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.033
ELB improved by 2.3895
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.796
ELB improved by 2.23721
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.611
ELB improved by 2.18481
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.438
ELB improved by 2.17273
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.279
ELB improved by 2.15897
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.192
ELB improved by 2.08762
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.286
ELB improved by 1.90548
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.679
ELB improved by 1.60738
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.43
ELB improved by 1.24909
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.522
ELB improved by 0.907431
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.888
ELB improved by 0.634439
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.445
ELB improved by 0.442693
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.126
ELB improved by 0.318697
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.885
ELB improved by 0.241773
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.69
ELB improved by 0.194508
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.525
ELB improved by 0.165107
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.379
ELB improved by 0.146337
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.245
ELB improved by 0.133957
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.119
ELB improved by 0.12552
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422
ELB improved by 0.119612
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.884
ELB improved by 0.115404
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.772
ELB improved by 0.112398
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.661
ELB improved by 0.110284
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.553
ELB improved by 0.108857
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.445
ELB improved by 0.107975
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.337
ELB improved by 0.10753
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.23
ELB improved by 0.107434
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.122
ELB improved by 0.107611
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.014
ELB improved by 0.107992
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.906
ELB improved by 0.108518
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.796
ELB improved by 0.109139
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.687
ELB improved by 0.109826
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.576
ELB improved by 0.110573
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.465
ELB improved by 0.111406
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.352
ELB improved by 0.112389
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.239
ELB improved by 0.113628
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.123
ELB improved by 0.115283
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.006
ELB improved by 0.117581
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.885
ELB improved by 0.120844
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.759
ELB improved by 0.125553
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.627
ELB improved by 0.132459
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.484
ELB improved by 0.142826
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.325
ELB improved by 0.158934
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.14
ELB improved by 0.185046
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.911
ELB improved by 0.228704
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.612
ELB improved by 0.299204
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.22
ELB improved by 0.392346
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.751
ELB improved by 0.468978
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.255
ELB improved by 0.495873
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.763
ELB improved by 0.491783
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.283
ELB improved by 0.48061
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.813
ELB improved by 0.469725
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.352
ELB improved by 0.461003
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.896
ELB improved by 0.45606
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.438
ELB improved by 0.457869
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.966
ELB improved by 0.471896
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.463
ELB improved by 0.502761
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.919
ELB improved by 0.543847
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.33
ELB improved by 0.588929
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.683
ELB improved by 0.647221
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.019
ELB improved by 0.664627
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.427
ELB improved by 0.59136
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.964
ELB improved by 0.463578
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.649
ELB improved by 0.315166
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.454
ELB improved by 0.194657
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.334
ELB improved by 0.120089
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.255
ELB improved by 0.0785987
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.2
ELB improved by 0.0555674
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.157
ELB improved by 0.0421785
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.124
ELB improved by 0.0338942
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.095
ELB improved by 0.0284437
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.07
ELB improved by 0.0246594
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.049
ELB improved by 0.0219126
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.029
ELB improved by 0.0198481
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.01
ELB improved by 0.0182566
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.993
ELB improved by 0.0170098
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.977
ELB improved by 0.0160267
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.962
ELB improved by 0.0152548
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.947
ELB improved by 0.0146593
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.933
ELB improved by 0.014217
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.919
ELB improved by 0.013913
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.906
ELB improved by 0.0137387
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.892
ELB improved by 0.0136921
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.878
ELB improved by 0.0137791
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.864
ELB improved by 0.014016
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.85
ELB improved by 0.0144354
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.835
ELB improved by 0.015093
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.819
ELB improved by 0.0160776
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.801
ELB improved by 0.017524
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.781
ELB improved by 0.0196244
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.759
ELB improved by 0.0226329
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.732
ELB improved by 0.0268392
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.699
ELB improved by 0.032469
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.66
ELB improved by 0.0394466
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.613
ELB improved by 0.0469984
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.56
ELB improved by 0.0533138
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.504
ELB improved by 0.0558706
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.451
ELB improved by 0.0529069
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.406
ELB improved by 0.045045
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.371
ELB improved by 0.0350254
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.345
ELB improved by 0.0256619
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.327
ELB improved by 0.0183832
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.313
ELB improved by 0.013319
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.303
ELB improved by 0.010004
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.296
ELB improved by 0.00788787
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-816.679
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-569.547
ELB improved by 247.132
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-512.116
ELB improved by 57.4307
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-467.247
ELB improved by 44.869
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.271
ELB improved by 21.9758
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.705
ELB improved by 8.5665
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.025
ELB improved by 4.67962
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.429
ELB improved by 3.59634
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.084
ELB improved by 3.34456
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.709
ELB improved by 3.37531
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.186
ELB improved by 3.52315
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.499
ELB improved by 3.68665
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.762
ELB improved by 3.73771
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.23
ELB improved by 3.53163
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.256
ELB improved by 2.97361
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.081
ELB improved by 2.17525
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.649
ELB improved by 1.43219
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.731
ELB improved by 0.917885
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.116
ELB improved by 0.61464
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.673
ELB improved by 0.443804
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.328
ELB improved by 0.344933
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.043
ELB improved by 0.284486
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.798
ELB improved by 0.245444
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.579
ELB improved by 0.219035
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.378
ELB improved by 0.200455
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.191
ELB improved by 0.186891
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.015
ELB improved by 0.176604
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.846
ELB improved by 0.168482
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.684
ELB improved by 0.161795
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.528
ELB improved by 0.156062
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.377
ELB improved by 0.15098
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.231
ELB improved by 0.146376
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.089
ELB improved by 0.142176
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.95
ELB improved by 0.138383
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.815
ELB improved by 0.135048
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.683
ELB improved by 0.132222
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.553
ELB improved by 0.12989
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.425
ELB improved by 0.127881
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.3
ELB improved by 0.125803
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.177
ELB improved by 0.123093
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.057
ELB improved by 0.119223
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.943
ELB improved by 0.113981
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.836
ELB improved by 0.10759
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.735
ELB improved by 0.100549
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.642
ELB improved by 0.0933935
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.555
ELB improved by 0.0865576
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.475
ELB improved by 0.0803656
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.4
ELB improved by 0.0750916
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.329
ELB improved by 0.0710371
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.26
ELB improved by 0.068623
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.192
ELB improved by 0.0684991
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.12
ELB improved by 0.0716099
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.041
ELB improved by 0.0789239
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.951
ELB improved by 0.0901006
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.85
ELB improved by 0.100861
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.747
ELB improved by 0.103121
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.654
ELB improved by 0.0933668
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.576
ELB improved by 0.0780007
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.511
ELB improved by 0.0645537
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.456
ELB improved by 0.0551462
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.407
ELB improved by 0.0488411
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.363
ELB improved by 0.044441
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.321
ELB improved by 0.0411946
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.283
ELB improved by 0.0387001
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.246
ELB improved by 0.0367403
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.211
ELB improved by 0.0351868
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.177
ELB improved by 0.0339546
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.144
ELB improved by 0.0329818
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.112
ELB improved by 0.0322206
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.08
ELB improved by 0.0316329
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.049
ELB improved by 0.0311876
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.018
ELB improved by 0.0308586
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.987
ELB improved by 0.0306234
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.957
ELB improved by 0.0304623
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.927
ELB improved by 0.0303571
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.896
ELB improved by 0.0302906
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.866
ELB improved by 0.0302461
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.836
ELB improved by 0.0302071
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.806
ELB improved by 0.0301571
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.776
ELB improved by 0.0300797
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.746
ELB improved by 0.0299586
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.716
ELB improved by 0.0297778
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.686
ELB improved by 0.0295224
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.657
ELB improved by 0.0291788
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.628
ELB improved by 0.0287354
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.6
ELB improved by 0.0281831
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.573
ELB improved by 0.0275163
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.546
ELB improved by 0.0267326
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.52
ELB improved by 0.025834
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.495
ELB improved by 0.0248263
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.472
ELB improved by 0.0237195
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.449
ELB improved by 0.022527
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.428
ELB improved by 0.0212653
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.408
ELB improved by 0.019953
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.389
ELB improved by 0.01861
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.372
ELB improved by 0.0172563
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.356
ELB improved by 0.0159115
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.341
ELB improved by 0.0145937
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.328
ELB improved by 0.0133188
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.316
ELB improved by 0.0121002
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.305
ELB improved by 0.0109485
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.295
ELB improved by 0.00987138
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.248 0.171 2.408
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.055 | 0.012 | 0.068 | |
| getPIPs | 0.047 | 0.016 | 0.063 | |
| graper | 0.080 | 0.020 | 0.101 | |
| makeExampleData | 0.010 | 0.000 | 0.011 | |
| makeExampleDataWithUnequalGroups | 0.012 | 0.000 | 0.013 | |
| plotELBO | 0.239 | 0.008 | 0.247 | |
| plotGroupPenalties | 0.787 | 0.076 | 0.863 | |
| plotPosterior | 0.442 | 0.016 | 0.457 | |
| predict.graper | 2.066 | 0.052 | 2.119 | |
| print.graper | 0.047 | 0.016 | 0.063 | |