Aaron Lun
| Snapshot Date: 2024-05-06 14:00:20 -0400 (Mon, 06 May 2024) |
| git_url: https://git.bioconductor.org/packages/batchelor |
| git_branch: RELEASE_3_19 |
| git_last_commit: d14eff8 |
| git_last_commit_date: 2024-04-30 11:13:32 -0400 (Tue, 30 Apr 2024) |
| Back to Multiple platform build/check report for BioC 3.19: simplified long |
|
This page was generated on 2024-05-07 11:37:37 -0400 (Tue, 07 May 2024).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.4.0 (2024-04-24) -- "Puppy Cup" | 4485 |
| palomino3 | Windows Server 2022 Datacenter | x64 | 4.4.0 (2024-04-24 ucrt) -- "Puppy Cup" | 4258 |
| lconway | macOS 12.7.1 Monterey | x86_64 | 4.4.0 (2024-04-24) -- "Puppy Cup" | 4470 |
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) | aarch64 | 4.4.0 beta (2024-04-15 r86425) -- "Puppy Cup" | 4480 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 136/2300 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| batchelor 1.20.0 (landing page) Aaron Lun
| nebbiolo1 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| palomino3 | Windows Server 2022 Datacenter / x64 | OK | ERROR | skipped | skipped | |||||||||
| lconway | macOS 12.7.1 Monterey / x86_64 | OK | OK | OK | OK | | ||||||||
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) / aarch64 | OK | OK | OK | ||||||||||
| kjohnson3 | macOS 13.6.5 Ventura / arm64 | see weekly results here | ||||||||||||
|
To the developers/maintainers of the batchelor package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/batchelor.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: batchelor |
| Version: 1.20.0 |
| Command: chmod a+r batchelor -R && F:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data batchelor |
| StartedAt: 2024-05-06 17:40:47 -0400 (Mon, 06 May 2024) |
| EndedAt: 2024-05-06 17:42:48 -0400 (Mon, 06 May 2024) |
| EllapsedTime: 120.3 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### chmod a+r batchelor -R && F:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data batchelor ### ############################################################################## ############################################################################## * checking for file 'batchelor/DESCRIPTION' ... OK * preparing 'batchelor': * checking DESCRIPTION meta-information ... OK * cleaning src * installing the package to build vignettes * creating vignettes ... ERROR --- re-building 'correction.Rmd' using rmarkdown Quitting from lines at lines 104-111 [unnamed-chunk-7] (correction.Rmd) Error: processing vignette 'correction.Rmd' failed with diagnostics: there is no package called 'scater' --- failed re-building 'correction.Rmd' --- re-building 'extension.Rmd' using rmarkdown --- finished re-building 'extension.Rmd' SUMMARY: processing the following file failed: 'correction.Rmd' Error: Vignette re-building failed. Execution halted