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This page was generated on 2023-03-17 11:06:43 -0400 (Fri, 17 Mar 2023).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.5 LTS)x86_644.2.2 (2022-10-31) -- "Innocent and Trusting" 4516
palomino4Windows Server 2022 Datacenterx644.2.2 (2022-10-31 ucrt) -- "Innocent and Trusting" 4295
lconwaymacOS 12.5.1 Montereyx86_644.2.2 (2022-10-31) -- "Innocent and Trusting" 4324
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for MinimumDistance on lconway


To the developers/maintainers of the MinimumDistance package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/MinimumDistance.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1209/2183HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
MinimumDistance 1.42.0  (landing page)
Robert Scharpf
Snapshot Date: 2023-03-15 14:00:04 -0400 (Wed, 15 Mar 2023)
git_url: https://git.bioconductor.org/packages/MinimumDistance
git_branch: RELEASE_3_16
git_last_commit: 9206e15
git_last_commit_date: 2022-11-01 11:06:56 -0400 (Tue, 01 Nov 2022)
nebbiolo2Linux (Ubuntu 20.04.5 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
palomino4Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
lconwaymacOS 12.5.1 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

Summary

Package: MinimumDistance
Version: 1.42.0
Command: rm -rf MinimumDistance.buildbin-libdir && mkdir MinimumDistance.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh MinimumDistance_1.42.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R MinimumDistance.buildbin-libdir
StartedAt: 2023-03-15 23:56:23 -0400 (Wed, 15 Mar 2023)
EndedAt: 2023-03-15 23:57:26 -0400 (Wed, 15 Mar 2023)
EllapsedTime: 63.1 seconds
RetCode: 0
Status:   OK  
PackageFile: MinimumDistance_1.42.0.tgz
PackageFileSize: 3.671 MiB

Command output

##############################################################################
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###
### Running command:
###
###   rm -rf MinimumDistance.buildbin-libdir && mkdir MinimumDistance.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh MinimumDistance_1.42.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R MinimumDistance.buildbin-libdir
###
##############################################################################
##############################################################################


>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=MinimumDistance.buildbin-libdir MinimumDistance_1.42.0.tar.gz'
>>>>>>> 

* installing *source* package ‘MinimumDistance’ ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
No methods found in package ‘oligoClasses’ for request: ‘mean’ when loading ‘crlmm’
Warning: replacing previous import ‘ff::pattern’ by ‘grid::pattern’ when loading ‘MinimumDistance’
Creating a new generic function for ‘allNames’ in package ‘MinimumDistance’
in method for ‘coerce’ with signature ‘"RangedDataCNV","GRanges"’: no definition for class “RangedDataCNV”
in method for ‘todf’ with signature ‘object="TrioSet",rangeData="RangedData"’: no definition for class “RangedData”
in method for ‘prune’ with signature ‘object="TrioSet",ranges="RangedDataCNV"’: no definition for class “RangedDataCNV”
in method for ‘prune’ with signature ‘object="TrioSetList",ranges="RangedDataCNV"’: no definition for class “RangedDataCNV”
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
No methods found in package ‘oligoClasses’ for request: ‘mean’ when loading ‘crlmm’
Warning: replacing previous import ‘ff::pattern’ by ‘grid::pattern’ when loading ‘MinimumDistance’
** testing if installed package can be loaded from final location
No methods found in package ‘oligoClasses’ for request: ‘mean’ when loading ‘crlmm’
Warning: replacing previous import ‘ff::pattern’ by ‘grid::pattern’ when loading ‘MinimumDistance’
** testing if installed package keeps a record of temporary installation path
* DONE (MinimumDistance)