Thomas Roberts
| Snapshot Date: 2023-12-01 14:05:06 -0500 (Fri, 01 Dec 2023) |
| git_url: https://git.bioconductor.org/packages/EpiCompare |
| git_branch: RELEASE_3_18 |
| git_last_commit: 2a32d4f |
| git_last_commit_date: 2023-11-20 06:43:54 -0500 (Mon, 20 Nov 2023) |
| Back to Multiple platform build/check report for BioC 3.18: simplified long |
|
This page was generated on 2023-12-02 11:36:18 -0500 (Sat, 02 Dec 2023).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 22.04.2 LTS) | x86_64 | 4.3.2 Patched (2023-11-13 r85521) -- "Eye Holes" | 4685 |
| palomino4 | Windows Server 2022 Datacenter | x64 | 4.3.2 (2023-10-31 ucrt) -- "Eye Holes" | 4420 |
| lconway | macOS 12.7.1 Monterey | x86_64 | 4.3.2 Patched (2023-11-01 r85457) -- "Eye Holes" | 4439 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 648/2266 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| EpiCompare 1.6.1 (landing page) Thomas Roberts
| nebbiolo2 | Linux (Ubuntu 22.04.2 LTS) / x86_64 | OK | OK | ERROR | |||||||||
| palomino4 | Windows Server 2022 Datacenter / x64 | OK | ERROR | skipped | skipped | |||||||||
| lconway | macOS 12.7.1 Monterey / x86_64 | OK | OK | OK | OK | | ||||||||
| kjohnson1 | macOS 13.6.1 Ventura / arm64 | see weekly results here | ||||||||||||
|
To the developers/maintainers of the EpiCompare package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/EpiCompare.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: EpiCompare |
| Version: 1.6.1 |
| Command: chmod a+r EpiCompare -R && F:\biocbuild\bbs-3.18-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data EpiCompare |
| StartedAt: 2023-12-01 18:31:05 -0500 (Fri, 01 Dec 2023) |
| EndedAt: 2023-12-01 18:33:26 -0500 (Fri, 01 Dec 2023) |
| EllapsedTime: 140.5 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### chmod a+r EpiCompare -R && F:\biocbuild\bbs-3.18-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data EpiCompare ### ############################################################################## ############################################################################## * checking for file 'EpiCompare/DESCRIPTION' ... OK * preparing 'EpiCompare': * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building 'EpiCompare.Rmd' using rmarkdown Quitting from lines 193-210 [unnamed-chunk-5] (EpiCompare.Rmd) Error: processing vignette 'EpiCompare.Rmd' failed with diagnostics: Parser error: while parsing a block mapping at line 1, column 1 did not find expected key at line 1, column 45 --- failed re-building 'EpiCompare.Rmd' --- re-building 'docker.Rmd' using rmarkdown --- finished re-building 'docker.Rmd' --- re-building 'example_report.Rmd' using rmarkdown --- finished re-building 'example_report.Rmd' SUMMARY: processing the following file failed: 'EpiCompare.Rmd' Error: Vignette re-building failed. Execution halted