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This page was generated on 2023-05-27 11:06:04 -0400 (Sat, 27 May 2023).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.2 LTS)x86_644.3.0 RC (2023-04-13 r84269) -- "Already Tomorrow" 4617
palomino3Windows Server 2022 Datacenterx644.3.0 RC (2023-04-13 r84269 ucrt) -- "Already Tomorrow" 4368
merida1macOS 12.6.4 Montereyx86_644.3.0 RC (2023-04-13 r84257) -- "Already Tomorrow" 4326
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for oppar on palomino3


To the developers/maintainers of the oppar package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/oppar.git to reflect on this report. See Troubleshooting Build Report for more information.

- Use the following Renviron settings to reproduce errors and warnings.

Note: If "R CMD check" recently failed on the Linux builder over a missing dependency, add the missing dependency to "Suggests" in your DESCRIPTION file. See the Renviron.bioc for details.

raw results

Package 1438/2229HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
oppar 1.28.0  (landing page)
Soroor Hediyeh zadeh
Snapshot Date: 2023-05-26 14:00:16 -0400 (Fri, 26 May 2023)
git_url: https://git.bioconductor.org/packages/oppar
git_branch: RELEASE_3_17
git_last_commit: 980d235
git_last_commit_date: 2023-04-25 10:46:19 -0400 (Tue, 25 Apr 2023)
nebbiolo1Linux (Ubuntu 22.04.2 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
merida1macOS 12.6.4 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

Summary

Package: oppar
Version: 1.28.0
Command: rm -rf oppar.buildbin-libdir && mkdir oppar.buildbin-libdir && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL --build --library=oppar.buildbin-libdir oppar_1.28.0.tar.gz
StartedAt: 2023-05-27 09:40:39 -0400 (Sat, 27 May 2023)
EndedAt: 2023-05-27 09:41:31 -0400 (Sat, 27 May 2023)
EllapsedTime: 51.9 seconds
RetCode: 0
Status:   OK  
PackageFile: oppar_1.28.0.zip
PackageFileSize: 5.31 MiB

Command output

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### Running command:
###
###   rm -rf oppar.buildbin-libdir && mkdir oppar.buildbin-libdir && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL --build --library=oppar.buildbin-libdir oppar_1.28.0.tar.gz
###
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* installing *source* package 'oppar' ...
** using staged installation
** libs
using C compiler: 'gcc.exe (GCC) 12.2.0'
gcc  -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG     -I"C:/rtools43/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c R_init_oppar.c -o R_init_oppar.o
gcc  -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG     -I"C:/rtools43/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c kernel_estimation.c -o kernel_estimation.o
gcc  -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG     -I"C:/rtools43/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c ks_test.c -o ks_test.o
ks_test.c: In function 'ks_sample':
ks_test.c:22:16: warning: unused variable 'mx_value' [-Wunused-variable]
   22 |         double mx_value = 0.0;
      |                ^~~~~~~~
gcc -shared -s -static-libgcc -o oppar.dll tmp.def R_init_oppar.o kernel_estimation.o ks_test.o -LC:/rtools43/x86_64-w64-mingw32.static.posix/lib/x64 -LC:/rtools43/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.17-bioc/R/bin/x64 -lR
installing to F:/biocbuild/bbs-3.17-bioc/meat/oppar.buildbin-libdir/00LOCK-oppar/00new/oppar/libs/x64
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'oppar' as oppar_1.28.0.zip
* DONE (oppar)