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This page was generated on 2023-03-29 11:05:36 -0400 (Wed, 29 Mar 2023).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.1 LTS)x86_64R Under development (unstable) (2023-03-16 r83996) -- "Unsuffered Consequences" 4547
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2023-03-15 r83984 ucrt) -- "Unsuffered Consequences" 4308
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2023-03-16 r83985) -- "Unsuffered Consequences" 4301
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for methylumi on palomino3


To the developers/maintainers of the methylumi package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/methylumi.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1191/2195HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
methylumi 2.45.0  (landing page)
Sean Davis
Snapshot Date: 2023-03-28 14:00:22 -0400 (Tue, 28 Mar 2023)
git_url: https://git.bioconductor.org/packages/methylumi
git_branch: devel
git_last_commit: bd20f4e
git_last_commit_date: 2022-11-01 11:04:28 -0400 (Tue, 01 Nov 2022)
nebbiolo1Linux (Ubuntu 22.04.1 LTS) / x86_64  ERROR    ERROR  skipped
palomino3Windows Server 2022 Datacenter / x64  ERROR    ERROR  skippedskipped
merida1macOS 10.14.6 Mojave / x86_64  ERROR    ERROR  skippedskipped

Summary

Package: methylumi
Version: 2.45.0
Command: chmod a+r methylumi -R && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data methylumi
StartedAt: 2023-03-28 19:43:08 -0400 (Tue, 28 Mar 2023)
EndedAt: 2023-03-28 19:43:24 -0400 (Tue, 28 Mar 2023)
EllapsedTime: 16.5 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   chmod a+r methylumi -R && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data methylumi
###
##############################################################################
##############################################################################


* checking for file 'methylumi/DESCRIPTION' ... OK
* preparing 'methylumi':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
      -----------------------------------
* installing *source* package 'methylumi' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Error: package or namespace load failed for 'minfi':
 objects 'rowSums', 'colSums', 'rowMeans', 'colMeans' are not exported by 'namespace:BiocGenerics'
Execution halted
ERROR: lazy loading failed for package 'methylumi'
* removing 'F:/biocbuild/bbs-3.17-bioc/tmpdir/Rtmp4GYWJ2/Rinst3ef05d5d5d7c/methylumi'
      -----------------------------------
ERROR: package installation failed