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This page was generated on 2023-10-16 11:36:19 -0400 (Mon, 16 Oct 2023).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.2 LTS)x86_644.3.1 (2023-06-16) -- "Beagle Scouts" 4626
palomino3Windows Server 2022 Datacenterx644.3.1 (2023-06-16 ucrt) -- "Beagle Scouts" 4379
merida1macOS 12.6.4 Montereyx86_644.3.1 (2023-06-16) -- "Beagle Scouts" 4395
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1184/2230HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
metaseqR2 1.12.0  (landing page)
Panagiotis Moulos
Snapshot Date: 2023-10-15 14:00:13 -0400 (Sun, 15 Oct 2023)
git_url: https://git.bioconductor.org/packages/metaseqR2
git_branch: RELEASE_3_17
git_last_commit: c37a5a4
git_last_commit_date: 2023-04-25 11:18:06 -0400 (Tue, 25 Apr 2023)
nebbiolo1Linux (Ubuntu 22.04.2 LTS) / x86_64  OK    OK    OK  NO, package depends on 'baySeq' which is not available
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  NO, package depends on 'baySeq' which is not available
merida1macOS 12.6.4 Monterey / x86_64  OK    OK    OK    OK  NO, package depends on 'baySeq' which is not available
kjohnson2macOS 12.6.1 Monterey / arm64see weekly results here

INSTALL results for metaseqR2 on palomino3


To the developers/maintainers of the metaseqR2 package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/metaseqR2.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: metaseqR2
Version: 1.12.0
Command: F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL metaseqR2
StartedAt: 2023-10-15 17:00:04 -0400 (Sun, 15 Oct 2023)
EndedAt: 2023-10-15 17:01:39 -0400 (Sun, 15 Oct 2023)
EllapsedTime: 95.0 seconds
RetCode: 0
Status:   OK  

Command output

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### Running command:
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###   F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL metaseqR2
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* installing to library 'F:/biocbuild/bbs-3.17-bioc/R/library'
* installing *source* package 'metaseqR2' ...
** using staged installation
** libs
using C compiler: 'gcc.exe (GCC) 12.2.0'
gcc  -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG     -I"C:/rtools43/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c pval.c -o pval.o
pval.c: In function 'add_from_both_sides':
pval.c:26:11: warning: unused variable 'esttotalperlength' [-Wunused-variable]
   26 |    double esttotalperlength = total/2;
      |           ^~~~~~~~~~~~~~~~~
gcc -shared -s -static-libgcc -o metaseqR2.dll tmp.def pval.o -LC:/rtools43/x86_64-w64-mingw32.static.posix/lib/x64 -LC:/rtools43/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.17-bioc/R/bin/x64 -lR
installing to F:/biocbuild/bbs-3.17-bioc/R/library/00LOCK-metaseqR2/00new/metaseqR2/libs/x64
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (metaseqR2)